Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1181 ATGGATTATTTTGAGGGTGGTAAACTTAAAAGAGTATTGAATGAAGGGTTTGAGGTAAAGTATAATGTGAATGAAGAATGTTTAAGGTGCTTGGGAAGTGAAGGAGGAGATTGTTTGATTGATTCTATTGATAAACATGTTGAGTTATGCTATCATGATGATTTAACTGATGCATCTATTGCTTCACCCACAGTTCTTTCTTCTGATGACAAAACTCCATGGAATTGGAAGAAGAAACTCGTTATTGGTGTTGTTTCTTCTGTGTTAGGATCATTTGCAGTGGTCAATGCTATATATATTTTCTATAGGCACCGAAAGAATAAAAGTTTTGCAAACTCAAATGTAAATTCTCGCAGCTTCGCTTCTGATTTCTTTTCAAAAGATCTCGAGAGGGGAAGTCAAAACATTGGAGTGCAACATTTCACTTATAGTGAGCTTGAAGAAGCCACAAACTACTTTGATCCATCCAAAGGATTAGGAAAAGGGGGCTTTGGAACAGTCTATTTCGGAAAACTGCATGATGGTCGAAGTGTTGCTGTGAAGAGATTATATATGAAAAATTATAAAAGAGTACTTGAGCAATTCATGAATGAAGTTCACATCCTTGCTCGATTAGTCCACCGAAATCTTGTGTCGCTATATGGATGTACTTCACGCCACAGCCGCGTACTTATTCTTGCTTACGAGTATGTTTCTAACGGAACTGTAGCTGATCATCTTAATGGTAATCAAGCAAAACATGGAAAACTTTCTTGGCATATTAGAATGAATATTGCTGTGGAGACGGCAAGTGCATTGAAATATCTCCATGTTTCTGACATCATTCATAGAGATATAAAAACCAACAATATTCTTCTTGACACTCATTTTCATGTCAAAGTAGCAGATTTTGGACTCTCGCGCCTTTTTCCAATTGATCATAGTCATGTTTCAACAGCTCCACAAGGGACTCCAGGTTACTTAGACCCTGAGTATTATGCACACTCCCACCTTACTCATAAAAGTGATGTCTACAGCTTCGGAGTAGTGATGATCGAGTTGATATCATCTTTGCCTGCTGTTGATATGACAAGGCCTAGGGATGATATCAATCTGTCCACCATGGCTATGAACAAAATTCAAAATCAAGCTTTGCACGAACTTGTGGATCCTTCCCTCGGTTTTGACACAGATTTGAAGGTAAATGAAATGATAAATGCCGTGGCCGAGTTAGCATTTCGGTGTCTTCAAATTTCCAAAGATATGAGACCGCGCATGGATGAAGTGTTTAAAACTTTACAAGATATTCAGGGTGCTGGTGCGAATGAAAGCCAATGTGAAGCAGCGAACATTTCAAACTCTCATGACGACATTGTGTTGTGCAATTATGATCCACGCCCGCTATCACCTGATCCAAATGATGTGAAATACAGCACCAAGTGCTAG 1425 0.3874 MDYFEGGKLKRVLNEGFEVKYNVNEECLRCLGSEGGDCLIDSIDKHVELCYHDDLTDASIASPTVLSSDDKTPWNWKKKLVIGVVSSVLGSFAVVNAIYIFYRHRKNKSFANSNVNSRSFASDFFSKDLERGSQNIGVQHFTYSELEEATNYFDPSKGLGKGGFGTVYFGKLHDGRSVAVKRLYMKNYKRVLEQFMNEVHILARLVHRNLVSLYGCTSRHSRVLILAYEYVSNGTVADHLNGNQAKHGKLSWHIRMNIAVETASALKYLHVSDIIHRDIKTNNILLDTHFHVKVADFGLSRLFPIDHSHVSTAPQGTPGYLDPEYYAHSHLTHKSDVYSFGVVMIELISSLPAVDMTRPRDDINLSTMAMNKIQNQALHELVDPSLGFDTDLKVNEMINAVAELAFRCLQISKDMRPRMDEVFKTLQDIQGAGANESQCEAANISNSHDDIVLCNYDPRPLSPDPNDVKYSTKC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1181 474 Pfam Protein kinase domain 156 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1181 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Mtr6g1181 474 SUPERFAMILY Protein kinase-like (PK-like) 135 429 IPR011009 -
Mtr6g1181 474 Gene3D Transferase(Phosphotransferase) domain 1 231 442 - -
Mtr6g1181 474 ProSiteProfiles Protein kinase domain profile. 153 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1181 474 Gene3D Phosphorylase Kinase; domain 1 126 230 - -
Mtr6g1181 474 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 3 474 - -
Mtr6g1181 474 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 474 IPR044652 -
Mtr6g1181 474 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Mtr6g1181 474 SMART serkin_6 153 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1181 Mtr-Chr6 16534676 16537612 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1181 13 464 Receptor kinase-like Gene Family AT1G25390 47.461 6.67e-131 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr6g1181 Pkinase 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1181 - - cam:101492618 583.563