Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1176 ATGGAGAAGAGGCAGACAAATTTGCAGAACTTCTTTGAGAAGCCTCTTCAAGATTCTTTTATTGTTGAACTTCTTTCCGGAAAATTCGAATCCATGGATTTGGCAGCTTATAATAAGAAAAGGCGATTGTCTCAGGTTGATCACATGCAGCCTATTTCCGAAGATATCTCAAATAAACTAAGACTAGAATTATCACCAGCTGACTCATATATGAACTTGATATCAGGTAGCACACAGGGTTCAAACGAAGATGTGGAAAGCCTGCAAAAAAATCTCTCTGAAGGAGAACTGACAGGAATGCAGACAAGAGTTAACGTTGATGGTAACGTCCAAGTCGAAGTAGCTTCTCGACATGAAGTGAATGATGTGTTTTGGGAACAATTCCTTACTGAAAGACCATGCTATTCAGACAATGAAGAGGCAATATCCAACTAA 435 0.3908 MEKRQTNLQNFFEKPLQDSFIVELLSGKFESMDLAAYNKKRRLSQVDHMQPISEDISNKLRLELSPADSYMNLISGSTQGSNEDVESLQKNLSEGELTGMQTRVNVDGNVQVEVASRHEVNDVFWEQFLTERPCYSDNEEAISN* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1176 144 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 113 144 IPR027725 -
Mtr6g1176 144 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 105 IPR027725 -
Mtr6g1176 144 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 113 144 - -
Mtr6g1176 144 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1176 Mtr-Chr6 16426902 16427480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1176 1 96 HSF AT4G13980 42.735 1.06e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1176 K09419 - mtr:MTR_6g044440 234.958