Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1167 ATGGATAATGCTGCCACCAATAACAACAACAATGGCTTTACTAGAAATTTGTCCCTTAATGTTGAAGCTGCTTCATCCCGGAAGGCTACCCCTTTACGTAAGATGGCCGCGGTCGCATCCATCGCGGCCGGTATTCAATTCGGGTGGGCCCTACAGCTTTCATTGCTAACACCATATGTCCAGTTGCTTGGTGTCCCACATCAGTGGGCTGCCAACATCTGGCTATGTGGTCCAATTTCAGGTATGATCATACAACCACTTGTAGGCTACTACAGTGACCGAAGCCATTCACGTTTCGGACGTCGTCGCCCTTTCATTTTTTTTGGTGCCATAGCAGTCGCGATCGCGGTCTTTTTAATTGGCTATGCTGCTGATCTTGGCCACTCCATGGGTGACGATCTGACGAAGAAAACACGGCCACGTGCAGTGGTGATCTTTGTTTTCGGGTTTTGGATACTAGATGTCGCCAATAATATGCTTCAAGGACCTTGTCGTGCCTTCATTGGTGACCTCGCTGGTGGTGATCACCGTCGAATGAGAATTGGCAATGGGATGTTCTCTTTTTTCATGGCCGTCGGTAATGTCCTTGGTTATGCTGCTGGCTCATACGACAAACTCTACACAAAGTTCCCTTTCACAAAAACCTTGGCTTGCAATGAGTTTTGTGCAAACCTCAAGACATGTTTTTTCTTTTCAATATTCCTCCTTGCATTAGTTTCTACATGCGCTCTACTTTATGTCGAAGATATTCCAATTACATCGTCGGAATCACAATCAGAATCGGAATCACAGGTTTCGTGCTTTGGGAATATGATGGGAGCCTTCAATGGAATACAAAGACCGATGTGGATGCTGATGTTGGTTACCGCGATCAATTGGGTTGCATGGTTTCCGTTCTTCTTGTTCGACACTGATTGGATGGGTCAAGAAGTATACGGTGGCAAACCAGGAGATAATGCATATAGCAAAGGAGTGCGTGTTGGAGCGTTGGGACTAATGCTGAATGCTTTTGTGCTTGCTTTTATGTCGTTGGCAGTGGAACCATTAGGGCGTTTAGTTGGGGGCGCGAAGAGACTTTGGGGGATTGTGAATATCATTCTTGCTATTGGTCTCGCTATGACGGTACTCATCACCAAGATGGCGGAACATGAACGACACATAAGCAACCTCGTCGGAAAACCCTCTAATGGTGTTAAGGCTGCCGCATTAGGTTTCTTCGGCGTCCTTGGGATCCCTCTAGCGATTAATTTCAGTGTCCCATTTGCTCTAGCATCAATTTACTCCAGCTCATCAGGGGCAGGGCAAGGTTTATCTTTGGGAGTTCTCAATATTTCAATTGTTGTACCACAAATGATCGTGTCAGCATTAAGTGGACAATGGGACTCTTTGTTTGGTGGTGGCAACTTACCTGCGTTCGTGGTTGGTGCGGTGGCGGCAGTCATCAGTGCTACATTGGCAATTATCCTTCTGCCTACTCCAAAGCCAGATGAGATGGCCAAGGCTTCAATTGGAGGTGGTTTCCATTAA 1527 0.4663 MDNAATNNNNNGFTRNLSLNVEAASSRKATPLRKMAAVASIAAGIQFGWALQLSLLTPYVQLLGVPHQWAANIWLCGPISGMIIQPLVGYYSDRSHSRFGRRRPFIFFGAIAVAIAVFLIGYAADLGHSMGDDLTKKTRPRAVVIFVFGFWILDVANNMLQGPCRAFIGDLAGGDHRRMRIGNGMFSFFMAVGNVLGYAAGSYDKLYTKFPFTKTLACNEFCANLKTCFFFSIFLLALVSTCALLYVEDIPITSSESQSESESQVSCFGNMMGAFNGIQRPMWMLMLVTAINWVAWFPFFLFDTDWMGQEVYGGKPGDNAYSKGVRVGALGLMLNAFVLAFMSLAVEPLGRLVGGAKRLWGIVNIILAIGLAMTVLITKMAEHERHISNLVGKPSNGVKAAALGFFGVLGIPLAINFSVPFALASIYSSSSGAGQGLSLGVLNISIVVPQMIVSALSGQWDSLFGGGNLPAFVVGAVAAVISATLAIILLPTPKPDEMAKASIGGGFH* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1167 508 Gene3D MFS general substrate transporter like domains 33 259 IPR036259 -
Mtr6g1167 508 PANTHER SUGAR TRANSPORTER 18 499 - -
Mtr6g1167 508 TIGRFAM GPH_sucrose: sucrose/H+ symporter 31 496 IPR005989 GO:0005887|GO:0008515|GO:0015770
Mtr6g1167 508 Pfam MFS/sugar transport protein 40 295 - -
Mtr6g1167 508 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 18 499 - -
Mtr6g1167 508 SUPERFAMILY MFS general substrate transporter 35 496 IPR036259 -
Mtr6g1167 508 CDD MFS_SLC45_SUC 37 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1167 Mtr-Chr6 16185515 16188693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1167 18 508 Sucrose Transporter Gene Family AT1G22710 62.475 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1167 K15378 - gmx:100782007 704.516