Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1163 ATGTACCACAAATCCCACTTTCTATTCTTAACTTTTCTTCTCTTCACCGCTGCGATGACCACCGCCGCGACAGCCGTCAACCCCGGTTGCACTCTCTATGCCTCCAACACCAACCAATCATGGTCCTCCACAAGTTCCACTTTCTCTTTACGTTTTGTCCCTGTCGACCCACCAACCTCTCCTCCTTCCTTCCTCGCCGCCATTGTGTACTCTGGTGGAGCTCCTGTTGTCTGGACAGCAGGTAACTCCACCGCTGTCGACTCCAGTGGTTCCTTCCAGTTTCTTACCAACGGCAACCTTCGTCTCATTAACGGTTCTGGCGCCACCGTCTGGGACTCTGGGACTGCTAATATGGGTGCAACATCAGCCACTGTTGAAGACAGTGGTAAATTGGCGATTTTGAACGGAACAAAGGAAGTTTGGTCGAGCTTTGATCATCTTACAGATACCCTTTTGCCTTCTCAGAATTTTACTGTTGGTAAGATTTTGAAATCTGGTGATTATAGTTTTAGTCTTGGAAAGAATGGTAATTTGAATTTGATTTGGAATGATAGTATAACTTTTTGGACTCATGGTTTGAATTCTTCTGTGAATGTGAGTTTGAGTAATCCTGTTTTAGGGTTAACATCCATTGGAATTTTGCAACTTTCTGATGTGAAATTGAGTACCCCTGTTATTGTTGCTTATAGTAGTGACTACGATAATGTAGGGAGTGGTGTGAGCGATGTTCTTAGGGTCTTGAAATTAGATAGGGATGGGAATTTGAGGATTTATAACACTTCTAGGGGTAGTGGAAATCCGGTTGCGAGATGGGCGGCCGTTCAGGACCAGTGTAAGGTTTATGCTTTTTGCGGAAACTATGGTATTTGCAGTTATAATGATACGAACCCTATTTGTGGTTGTCCTTCGGAGAATTTCGAGATGATTGATGGTATTAGAAAAGGGTGTAGGAGGAAAGTGGATCTTGATAGTTGTCAAGGGAATGAAACTATGTTGACATTGGATCATACGCAGTTATTAACTTATTACCCTGAGACTGATTCGTCGCTTCTCATTGGTTTCACGGCGTGTAGAGGAAATTGTCTCTCAGGTTCGCGTGCTTGTTTTGCTTCTACTTCGTTGTTGGATGGAAGTGGACATTGTTATTTGAAGTCGGTAGATTTTTTCAGTGGATATTATAGTCCAACGTTACCTAGTATTTCGTATGTCAAGGTTTGTTCGCCGTTGGCTCCAAATCCACCACCCTCTTTGGGGGAGACGGTGAAGGAAAAGAGTTCGAGTGTACCTGCTTGGGTTATTGTGGTTATTATTCTGGGAACCCTTTTAGTTGGGATTGCTATTGAAAGCGGATTATGGATTTGGTGCTGTAGAAATACTGCAAGGTTTGGTGTATTGTCGGCTCGGTATGCACTTCTAGAATACGCTTCAGGTGCGCCGATTCAGTTCACATACAAGGAACTTCAGCGCTCGACAAAAGGGTTCAAGGAGAAGCTCGGAGCTGGTGGATTTGGTGCTGTGTATCGAGGAATTCTTGTTAACAAAACTGTTGTTGCGGTGAAACAGCTTGAGGGAATTGAGCAAGGGGAGAAACAGTTTAGAATGGAAGTTGCAACGATAAGCAGTACTCATCATCTTAATTTGGTGAGACTTATAGGTTTTTGCTCGGAAGGACGCCGCAGGCTTTTAGTCTATGAGTTCATGAAAAATAGTTCCTTGGATAATTTTTTATTCCCGGAAGAAGAGCAACTGGGAAAACTGTTGAATTGGGAGTATCGGTACAATATAGCGCTCGGCACTGCAAAAGGAATCACATACCTGCACGAGGAGTGTCGCGACTGCATAGTCCACTGTGATATCAAACCTGAAAACATTCTCTTGGACGAGAATTACGTCGCTAAAGTATCGGATTTCGGTCTGGCAAAGCTCGTTAATCCGAAGGAACATAGACACAGAACGTTGACAAGCGTACGAGGAACAAGAGGATATTTAGCCCCTGAATGGATTGCAAATCTTCCTATAACATCGAAATCTGATGTTTACAGCTACGGCATGGTTTTGTTAGAGATTGTGAGCGGAAAGAGGAACTTTAATGTCTCCGACGAAACAGATAGGAAGAAATTCTCAATTTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAAAGGAATTTTGGATAAAAGACTGGCCGATATGGAAGTTGATATGGAGCAAGTTATGAGAGCGATTCAGGTATGCTTTTGGTGCATCCAAGAGCAACCATCTCAAAGACCGGTGATGAGCAAAGTCGTTCAAATGCTAGAAGGTGTAAAAGAAATTGAGAAACCACCTTCTCTAAAATTAGTCATTGAAGGACCTGTTAGCGAAACCAGCATCTACATTAGTAGCAATGTTAGTGCATTTTCCACAATTGGAGCCTCACCAAATGTTCCTTCATCACCATCAATCCAGATTAGTGGTGTTTCATACTTCGCCTCGGGACGAAACCCTGAGAAGGCAACTTCATCCCTCTTGCAATCAAATCAATGA 2526 0.4319 MYHKSHFLFLTFLLFTAAMTTAATAVNPGCTLYASNTNQSWSSTSSTFSLRFVPVDPPTSPPSFLAAIVYSGGAPVVWTAGNSTAVDSSGSFQFLTNGNLRLINGSGATVWDSGTANMGATSATVEDSGKLAILNGTKEVWSSFDHLTDTLLPSQNFTVGKILKSGDYSFSLGKNGNLNLIWNDSITFWTHGLNSSVNVSLSNPVLGLTSIGILQLSDVKLSTPVIVAYSSDYDNVGSGVSDVLRVLKLDRDGNLRIYNTSRGSGNPVARWAAVQDQCKVYAFCGNYGICSYNDTNPICGCPSENFEMIDGIRKGCRRKVDLDSCQGNETMLTLDHTQLLTYYPETDSSLLIGFTACRGNCLSGSRACFASTSLLDGSGHCYLKSVDFFSGYYSPTLPSISYVKVCSPLAPNPPPSLGETVKEKSSSVPAWVIVVIILGTLLVGIAIESGLWIWCCRNTARFGVLSARYALLEYASGAPIQFTYKELQRSTKGFKEKLGAGGFGAVYRGILVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRRRLLVYEFMKNSSLDNFLFPEEEQLGKLLNWEYRYNIALGTAKGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLVNPKEHRHRTLTSVRGTRGYLAPEWIANLPITSKSDVYSYGMVLLEIVSGKRNFNVSDETDRKKFSIWAYEEFEKGNIKGILDKRLADMEVDMEQVMRAIQVCFWCIQEQPSQRPVMSKVVQMLEGVKEIEKPPSLKLVIEGPVSETSIYISSNVSAFSTIGASPNVPSSPSIQISGVSYFASGRNPEKATSSLLQSNQ* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1163 841 Pfam S-locus glycoprotein domain 243 302 IPR000858 GO:0048544
Mtr6g1163 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Mtr6g1163 841 CDD STKc_IRAK 498 768 - -
Mtr6g1163 841 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Mtr6g1163 841 Gene3D - 147 273 IPR036426 -
Mtr6g1163 841 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 193 IPR036426 -
Mtr6g1163 841 ProSiteProfiles Bulb-type lectin domain profile. 148 270 IPR001480 -
Mtr6g1163 841 ProSiteProfiles Protein kinase domain profile. 492 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1163 841 PANTHER OS07G0415500 PROTEIN 7 828 - -
Mtr6g1163 841 Gene3D - 25 146 IPR036426 -
Mtr6g1163 841 Gene3D Transferase(Phosphotransferase) domain 1 567 779 - -
Mtr6g1163 841 Pfam Protein kinase domain 495 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1163 841 ProSiteProfiles Bulb-type lectin domain profile. 23 146 IPR001480 -
Mtr6g1163 841 SUPERFAMILY Protein kinase-like (PK-like) 475 767 IPR011009 -
Mtr6g1163 841 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 7 828 - -
Mtr6g1163 841 Pfam D-mannose binding lectin 76 160 IPR001480 -
Mtr6g1163 841 PIRSF SRK 1 806 IPR024171 GO:0004674
Mtr6g1163 841 Gene3D Phosphorylase Kinase; domain 1 464 566 - -
Mtr6g1163 841 SMART blect_4 32 147 IPR001480 -
Mtr6g1163 841 SMART serkin_6 492 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1163 Mtr-Chr6 16149320 16152918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1163 465 776 Receptor kinase-like Gene Family AT5G20050 45.231 6.69e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr6g1163 Pkinase 6.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1163 - - cam:101506838 1382.47