Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1162 ATGTACCTTAAAATCTTTCTATTTTTAGCCTTTATTCTCTTTGTTGCCGCCACCGTCACCGCCGTCAACCCTGGCGACACCCTCTCCGCCTCCACCAACCAATCATGGTCATCACCATCCTCCACTTTCTCCCTCCGTTTCATCCAAACCACCCCACCAACAACCCCTCCTTCCTTCCTCGCCGCCGTAGTCTACTCCGGTGGAGCTCCAGTTGTCTGGACAGCTGGAAACTCCATCGCAGTTGACTCCGGGGGCTCCTTTCAGTTTCAAACCAACGGGAATCTCCGTCTTGTCAACGGCTCAGGCGCTGTGAAATGGGACAGCAACACAACAAGGTTGGGTGGTACATCAGTTAAAATTCAAGATAGTGGCAAATTGGTCATTTTGAATGGGACAAAGGAAGTTTGGTCAAGCTTTGATCATCTTACAGATACCCTTTTGCCATCTACAAATTTTAGTGTTGGTAAGGTATTGAAATCTGGTGATTATAGTTTTAGTCTTGCAAAGATTGGTAATTTGAGTTTGATTTGGAATGATAGTGTAACTTTTTGGACACATGGTTTGAATTCATCTGTTAATGGTAGTTTGAGTAATCCTGTTTTAGGTTTGTCGCCTATTGGGATTTTGCAGCTTAGTGATGTGAATTTGAGTACACCTGTTCCTGTTGCTTATAGTAGTGATTATGCTGATGCTGGGAGTGGTGGGAGTGATGTTTTGAGGGTTTTGAAGTTGGACAGTGATGGGAATTTGAGGATTTATAGTACTTCTAGAGGGAGTGGGAGTCCGATTGCGAGATGGGCGGCTGTTCAGGACCAGTGTCAGGTTTATGCTTTTTGTGGGAATTATGGTATTTGTAGTTATAATGATACGAATCCGATTTGTGGGTGTCCTTCGGAGAATTTCGAAGTGAATGATGGTGGAAAAGGGTGTAGGAGGAAGGTGGATCTTGCTAATTGTCGAGGGAATGAGACTATGCTGGAGTTGGATCATACACAGTTTTTGACTTATCCTCCTGAATCCTTGTCGCAGTCGTTTTTCATCGGTATATCGGCGTGTCGAGGGAATTGTCTCTCTGGGTCGGGTGCTTGTTATGCTTCTACGTCTTTGTCGGATGGAACGGGGCAATGTTACATTAAATCGGTGGATTTAGTTAGTGGTTATCATAGTCCTGCTTTACCTAGTACTTCTTATGTCAAAGTTTGTCCGCCGTTGGCTCTGAATCCACCACCTACTTCTGGGGAGACGGTGAACGAGAAGAGTTCGAGTGTACCTGGTTGGGTTGTTCTAGTTGTTGTTTTGGGTACCCTTTTAGGCGTGGTTGCTATTGAAGGTGGTTTATGGTTTTGGTGTTGTAGAAAAACTGCAAGGTTTGGTGTATTGTCGGCTCAATACGCTCTTCTTGAGTACGCTTCTGGTGCGCCGGTTCAGTTCACATACAAGGAGCTTCAGCGCTCTACAAAAAACTTCAAGGAGAAGCTCGGAGCCGGTGGATTTGGTGCTGTGTATCGAGGAATTCTTGTTAACAAAACTGTTGTTGCAGTAAAACAACTTGAAGGAATTGAGCAAGGTGAGAAACAGTTTAGGATGGAAGTTGCAACTATAAGCAGTACTCATCATTTGAATTTGGTGAGACTTATCGGCTTTTGCTCGGAAGGACGCCACAGGCTTTTAGTCTACGAGTTCATGAAAAACAGTTCCTTAGATAACTTTTTATTCCCAAAAGAAGAGCAATCGGGAAAGCTGTTGAATTGGGAGTACCGGTACAATATTGCACTTGGCACTGCTAGAGGAATCACATACCTTCATGAGGAGTGTCGTGACTGCATAGTCCACTGTGATATCAAACCTGAAAACATTCTCTTGGACGATAATTACGTCGCTAAAGTCTCGGATTTCGGTCTTGCAAAGCTCGTTAATCCAAAAGACCATAGACACAGGACTTTGACAAGTGTACGAGGAACAAGAGGATATTTAGCCCCTGAGTGGATTGCAAATCTTCCGACAACATCGAAATCTGATGTTTACAGCTACGGCATGGTCTTGTTAGAGATTGTGAGCGGAAGGAGGAACTTCGATGTCTCCGAGGAAACAAATAGGAAGAAATTTTCCACTTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAAAGGAATTTTGGACAAAAGACTCGCAGACGTAGAAGTCGATACCGAGCAAGTTACAAGGGCAATTCAAGTATGCTTTTGGTGCATCCAAGAGCAGCCGTCTCAACGTCCAGCGATGAGCAAAGTTGTTCAAATGCTAGAAGGAGTAAAAGAAATTGAGAAGCCAGCTCCTCCTAAGTTTGTTGCTGAAGGACCTGTTAGTGGAACCAGCACCTATATTAGCAGCAATGTAAGTGCATTTTCCACAGTTGGAGCCTCACCAAATGTTCCTTCGTCATCTTCATCAATCCAGACTAGTGGTGTTTCAAACTTTGCCTCGGGAAGAAATCCTGAGAAGGCAAGTTCATCCCTTTTACAATCAGATCAATGA 2514 0.4411 MYLKIFLFLAFILFVAATVTAVNPGDTLSASTNQSWSSPSSTFSLRFIQTTPPTTPPSFLAAVVYSGGAPVVWTAGNSIAVDSGGSFQFQTNGNLRLVNGSGAVKWDSNTTRLGGTSVKIQDSGKLVILNGTKEVWSSFDHLTDTLLPSTNFSVGKVLKSGDYSFSLAKIGNLSLIWNDSVTFWTHGLNSSVNGSLSNPVLGLSPIGILQLSDVNLSTPVPVAYSSDYADAGSGGSDVLRVLKLDSDGNLRIYSTSRGSGSPIARWAAVQDQCQVYAFCGNYGICSYNDTNPICGCPSENFEVNDGGKGCRRKVDLANCRGNETMLELDHTQFLTYPPESLSQSFFIGISACRGNCLSGSGACYASTSLSDGTGQCYIKSVDLVSGYHSPALPSTSYVKVCPPLALNPPPTSGETVNEKSSSVPGWVVLVVVLGTLLGVVAIEGGLWFWCCRKTARFGVLSAQYALLEYASGAPVQFTYKELQRSTKNFKEKLGAGGFGAVYRGILVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNFLFPKEEQSGKLLNWEYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDDNYVAKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWIANLPTTSKSDVYSYGMVLLEIVSGRRNFDVSEETNRKKFSTWAYEEFEKGNIKGILDKRLADVEVDTEQVTRAIQVCFWCIQEQPSQRPAMSKVVQMLEGVKEIEKPAPPKFVAEGPVSGTSTYISSNVSAFSTVGASPNVPSSSSSIQTSGVSNFASGRNPEKASSSLLQSDQ* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1162 837 ProSiteProfiles Protein kinase domain profile. 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1162 837 SMART blect_4 27 142 IPR001480 -
Mtr6g1162 837 Pfam D-mannose binding lectin 71 158 IPR001480 -
Mtr6g1162 837 Pfam Protein kinase domain 489 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1162 837 MobiDBLite consensus disorder prediction 799 837 - -
Mtr6g1162 837 Gene3D - 142 268 IPR036426 -
Mtr6g1162 837 Gene3D Transferase(Phosphotransferase) domain 1 562 772 - -
Mtr6g1162 837 PANTHER OS07G0415500 PROTEIN 5 826 - -
Mtr6g1162 837 PIRSF SRK 1 814 IPR024171 GO:0004674
Mtr6g1162 837 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Mtr6g1162 837 SMART serkin_6 487 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1162 837 CDD STKc_IRAK 493 763 - -
Mtr6g1162 837 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 5 826 - -
Mtr6g1162 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 187 IPR036426 -
Mtr6g1162 837 ProSiteProfiles Bulb-type lectin domain profile. 143 265 IPR001480 -
Mtr6g1162 837 Pfam S-locus glycoprotein domain 238 297 IPR000858 GO:0048544
Mtr6g1162 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Mtr6g1162 837 Gene3D - 14 140 IPR036426 -
Mtr6g1162 837 SUPERFAMILY Protein kinase-like (PK-like) 470 762 IPR011009 -
Mtr6g1162 837 Gene3D Phosphorylase Kinase; domain 1 458 561 - -
Mtr6g1162 837 ProSiteProfiles Bulb-type lectin domain profile. 19 141 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1162 Mtr-Chr6 16145994 16149148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1162 460 770 Receptor kinase-like Gene Family AT5G20050 43.210 3.54e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr6g1162 Pkinase 8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1162 - - cam:101506838 1371.68