Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1160 ATGGCAAGGTTTTGTTGCCTTGACACTTATTCTTATGCTTTGTTTTTTATTTCTTCTCTTGTATTAGCTTTTCACTTTCATGCCTCTGAGGCACAAGCTCATCCCCAAGTAGTCAAGGGACTCTCATTTTCTTTCTTCTCCAAAACCTGTCCCAACCTTGAAACTGTAGTGAGAGACCATCTTTCAAAGGTGTTGAAGAAGGACAATGGCCAAGCCCCTGGCTTGCTCCGTATATTCTTCCATGATTGCTTTGTAACGGGATGTGATGGGTCAATTTTGTTGGATGCAAAAGGAGGCAAAGATGAAAAGGGTGAAATAAAAAATGTAGGAATAAGAAAGGAAGCATTAAGAACAATTGATGACATTCGTAGTATTGTGCACAACAAGTGTGGAAGGATAGTCTCATGTGCTGATATCACTGTCTTAGCTGCTCGTGAAGCTGTTTTCCAATCAGGAGGCCCTTTAATTAAAGTACCACTTGGAAGAAGAGATAGTCTAACATTCAACACAAAAGCAACATCAAAAATTCCATCTCCCTTTAAGAAAACCAATGAAACAATCAAAACATTTGCAGAACAAAACTTTGATGTCACAGATGTTGTTGCCTTATCAGGTGCACACACATTTGGTCGTGCACACTGTAGCACATTCTCCAAGAGGCTCTCTTCAAAGGACCCTACAATGGAAAAATCCTTAGCCAAAAGCCTCAAAACTAGATGTCCAAATGCAAGCTCAGACAATACAGCAAACTTGGATTTGAGAACACCAACATTTTTTGATAACAAATACTACCTTGAATTAATGAATAGTCGTGGTTTGTTCACTTCTGACCAAGACTTGTTCAATGATAAGAGAACAAAGGGATTAGTCACTTCATTTGCCAATAATCAGAAGCTGTTTTTTGAGAAGTTTTCCGTTGCTATTACTAAGATGAGTCAATTGAGTGTGTTGACGGGTAATCAAGGTGAAATTCGCGCTAAGTGCAATGTTGTAAACACAAAGTAA 1005 0.3871 MARFCCLDTYSYALFFISSLVLAFHFHASEAQAHPQVVKGLSFSFFSKTCPNLETVVRDHLSKVLKKDNGQAPGLLRIFFHDCFVTGCDGSILLDAKGGKDEKGEIKNVGIRKEALRTIDDIRSIVHNKCGRIVSCADITVLAAREAVFQSGGPLIKVPLGRRDSLTFNTKATSKIPSPFKKTNETIKTFAEQNFDVTDVVALSGAHTFGRAHCSTFSKRLSSKDPTMEKSLAKSLKTRCPNASSDNTANLDLRTPTFFDNKYYLELMNSRGLFTSDQDLFNDKRTKGLVTSFANNQKLFFEKFSVAITKMSQLSVLTGNQGEIRAKCNVVNTK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1160 334 PANTHER PEROXIDASE 25-RELATED 18 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Mtr6g1160 334 PANTHER PEROXIDASE 18 331 - -
Mtr6g1160 334 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 Pfam Peroxidase 57 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 Gene3D - 45 329 - -
Mtr6g1160 334 SUPERFAMILY Heme-dependent peroxidases 40 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 Gene3D Peroxidase, domain 2 178 312 - -
Mtr6g1160 334 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Mtr6g1160 334 ProSiteProfiles Plant heme peroxidase family profile. 40 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr6g1160 334 CDD secretory_peroxidase 40 331 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1160 Mtr-Chr6 16046058 16048616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1160 14 334 Peroxidase AT1G71695 50.456 1.81e-116 339