Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1148 ATGATGTTTCGTTTGTTCTTGGTTCCATTTATCTTTCTCTTGGTTGGGTTGGTAGTACAAGAAACCAATGGTCAATATTACAAGAAAGTTGGAAATAAAATATTTCCATTCTCCACAATAGTGGTTGATCAATCAGGAAATGGACACTTTTCTACCATTCAATCTGCTATTGATTCAATCCCATTTTACAACACAAATTGGGTTGCCATTAGAGTCAAGGCTGGTATCTATAGAGAAAAAGTTGTGATCCCACAGAACAAATCCTACATTATATTGAAGGGGGCTGGGAAAAGAAAAACAATTGTCGAGTGGTATGATCCCGATGGACCTGAAAGAAGTCCAACCTTTTCAATATTGGCAGACAATATTCATGTTAGATGTATGAGTTTTAGGAACTCATACAACAATCCTATAAATGGAAATCGAAAGTTACGTGCTGTAGCTACAACTGTTAGTGGTGACAAGGTTAATTTTTTCAGAGTTGCTTTTTATGGCTATCAAGACACACTGTATGATGCAAATGGAAGACACTACTACAAACTTTGTACCATACAAGGTGCTGTAGATTTTATCTTTGGTGCTGGCCAATCTTTGTTTGAGAGGTGTTCCATATCAGTTATTGGGGGTGGATTTATAACAGCACAAGGTAGAGAGAGCCCAAATGATACAAATGGATTTGTATTTAAAGATTGTCATATCTTTGGAAATGCAAATACTTACTTAGGGAGGCCATGGAGACCTTATGCAAGAGTGCTTTTTTACAAGACTAATATGACCAAAATTGTAGAACCTAGTGGTTGGGATTCATGGAGTCCTGATGGTCGTGAGGATCTAAGTACATATGCTGAGTATGGCAATTTTGGACCAGGTGCTGATACATCCAAGAGAGTAAGTTGGGCCAAGAAATTGGATTTATCAACTGTTGAAAATATGGCAAATTTGAATTTCATCAACACACCAGAAGAATGGATCAATTATCAACCATTCTAA 990 0.3697 MMFRLFLVPFIFLLVGLVVQETNGQYYKKVGNKIFPFSTIVVDQSGNGHFSTIQSAIDSIPFYNTNWVAIRVKAGIYREKVVIPQNKSYIILKGAGKRKTIVEWYDPDGPERSPTFSILADNIHVRCMSFRNSYNNPINGNRKLRAVATTVSGDKVNFFRVAFYGYQDTLYDANGRHYYKLCTIQGAVDFIFGAGQSLFERCSISVIGGGFITAQGRESPNDTNGFVFKDCHIFGNANTYLGRPWRPYARVLFYKTNMTKIVEPSGWDSWSPDGREDLSTYAEYGNFGPGADTSKRVSWAKKLDLSTVENMANLNFINTPEEWINYQPF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1148 329 SUPERFAMILY Pectin lyase-like 38 326 IPR011050 -
Mtr6g1148 329 PANTHER PECTINESTERASE 10-RELATED 6 328 - -
Mtr6g1148 329 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Mtr6g1148 329 Gene3D - 37 328 IPR012334 -
Mtr6g1148 329 Pfam Pectinesterase 40 317 IPR000070 GO:0030599|GO:0042545
Mtr6g1148 329 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 328 - -
Mtr6g1148 329 ProSitePatterns Pectinesterase signature 1. 64 83 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1148 Mtr-Chr6 15863568 15868031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1148 39 276 Carbohydrate Esterase AT2G19150 44.715 4.86e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1148 - - gmx:100819252 435.647