Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1147 ATGAGTTCTCAACAATTTCATATTTGTTTTCACTTGTTAAGAGTCCAAATTCTTAGATCAATCATCATGTTTCGTTTTCTCTTATTTGCTTTTATCTTTGTGGGTTTGAAACAAGATGGTGCTAATGCTCAAATTTACAAAAGAGTGGGAAATAAGCTCTTACCATATTCAACAATCATTGTAGATCCATTGGGAAATGGGAACTTCACAACAATTAAATCTGCTATTGAATCAATTCCTTTGAACAATAAACATTGGGTTGCCATTAGGGTGAAGGCAGGTACCTACAGGGAAAAGATAGAGATTCCACGTGATAAACCTTACATCATACTAAAGGGAGCAGGAAAGAGGAAAACCATTGTTGAATGGGATGATCATGCACCAATCTCACAAAGTGCTACATTTTCCTCAATGGCTGATAATGTTGTCGTCAAATCCATCAGTTTCAGGAATACATACAAGAATCCGATAAAGAACCATACCCACATAGCTGCAGTAGCTGCAATGATAAGTGGAGATAAGACTTATTTTTTTAGGGTTGGTTTCTTTGGTTATCAAGACACTTTGTGGGACAACAATGGAAGACACTACTACAAGCTTTGTACCATACAAGGTGCTATAGATTTTATCTTTGGTGCAGGCCAGTCTTTGTTCGAGAGGTGTTCTATATCTGTTATTGGTGGTGGTTATATAACAGCACAAGGTAGAACGAATGCAAATGATGAAAGTGGGTTTGTTTTCAAAGATTGTCATATCTTTGGTAATGCAAGGGCTTATTTGGGAAGGCCTTGGAGACGTTATGCTAGAGTCTTATTTTACAAAACAAATATGACCAAAATTGTAGCACCTAGAGGTTGGAATCCATGGAGTTTTGATGGTGAAGAGGATCAAATAACATTCGCAGAATATGGCAATTTTGGACCTGGTGCTGATACATCCAAGAGAGTGAAGTGGACTAAGAAATTGGATTTAGAAACTGTTGAAAATATGGCTAGTCTTAACTTCATCAACACACCAGAAGAATGGATTAATTATCAACCGTTCTAA 1047 0.3687 MSSQQFHICFHLLRVQILRSIIMFRFLLFAFIFVGLKQDGANAQIYKRVGNKLLPYSTIIVDPLGNGNFTTIKSAIESIPLNNKHWVAIRVKAGTYREKIEIPRDKPYIILKGAGKRKTIVEWDDHAPISQSATFSSMADNVVVKSISFRNTYKNPIKNHTHIAAVAAMISGDKTYFFRVGFFGYQDTLWDNNGRHYYKLCTIQGAIDFIFGAGQSLFERCSISVIGGGYITAQGRTNANDESGFVFKDCHIFGNARAYLGRPWRRYARVLFYKTNMTKIVAPRGWNPWSFDGEEDQITFAEYGNFGPGADTSKRVKWTKKLDLETVENMASLNFINTPEEWINYQPF* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1147 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 347 - -
Mtr6g1147 348 ProSitePatterns Pectinesterase signature 2. 203 212 IPR033131 -
Mtr6g1147 348 Gene3D - 56 347 IPR012334 -
Mtr6g1147 348 Pfam Pectinesterase 59 336 IPR000070 GO:0030599|GO:0042545
Mtr6g1147 348 ProSitePatterns Pectinesterase signature 1. 83 102 IPR018040 -
Mtr6g1147 348 PANTHER PECTINESTERASE 10-RELATED 33 347 - -
Mtr6g1147 348 SUPERFAMILY Pectin lyase-like 56 345 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1147 Mtr-Chr6 15849273 15854687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1147 26 295 Carbohydrate Esterase AT2G19150 42.446 1.89e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1147 - - gmx:100819252 468.388