Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1145 ATGGATTTCTCTCAAAACACAATTGCAATTGGCCTCCTTTCAACAATCTTTCTCTTCATAATTCTATTCCACCACTCCAAATCCAACAAAACCAAACAACCCCCAATGGTTGCTGGTACTTGGCCAATAATTGGCCATCTTCCCCTCTTTAGTAAATCTCAAGCAACTCATCATCTTCTAGGTTCCATGGCAGACAAATATGGTCCTATTTTCACCATCAAACTCGGCACCGCGACAACTCTAGCCATAAACAATTGGAAAACAGCAAAAGAATGCTACACAACAAACGATATAGCTGTTGCTTATCGTCCAAACCTCGTGGCATTCGAACACATGACATATAATTATGCCATGCTTGGTTTTGCACCTTACGGTCCCTTTTGGCGCGAAATGAGGAAGATCGTTACACTAAATTTTCTCTCAAATCATCAGATCAATCTATTAACTCACATTTGTGTCTCTGAGGTTCAAACTTCGATTAAAGAGCTATATAATTTTTGGAAAAATAGGAAAGATGAAAATGGTTATTTGTTGGTGGAGATGAAGAAATGGTTAAATGAGTTGGCTTTTAATATAGTTCTTAGAATGGTTGCTGGGAAAAGATACTTTGGGGAGAGTGTGATGGTTAAAGAGGAAGAAGCTAATAGGTGTTTGAATGCTTTAAGAGATTACATGCGTTTGACTGGTGTGTTTCCTATTGCTGATGCTGTTCCTTTTTTGAGGTGGTTTGATTTTGGTGGACATGAGAAGAATATGAAGCAAAATTTTAAGGAGTTGGATGGTGTTATCACAGAGTGGTTGGATGAGCACAAGAAGAAGAAGAGTGAAGGTGTTGATAAGAGTAAAGAGGGTCAAGATTTCATGGATGTGATGCTTTCTACTATTGATGGAACAAACATTCATGGGTTTCATTCGGATACTGTCATCAAAGCCACAACAATGGCACTAGTTCTGGGAGCAACAGACACTAGCAGTGTTACACACACATGGGCTTTGTGCCTATTATTGAACAATCCTCATACACTGGAAAAAGTTAAAGAAGAAATTGATCTCCACATTGGAAAAGAGAGACTATGCATTCTTGAGTCAGATATTAACAAGTTGGTATACCTTCAAGCAGTTGTCAAAGAAACGCTAAGACTTTATCCAGCATCACCTCTTTCAGGAATACGAGAATTTAGAGAAGATTGCCAGATTGGTGGCTACGATGTAAAGAAAGGAACTCGACTATTTACAAACTTGTGGAAGATCCAAACTGATCCTAGTGTTTGGCCGGATCCATTGGAGTTCAAACCTGAGAGATTTCTTACAACTCATAAAGATGTTGATGTTAGAGGTAATCATTTTGAGCTTTTACCATTTGGAAGTGGAAGAAGGATGTGTCCTGGAATATCCTTTGCCCTTCGAAGTGCTTATTTGACACTTGCAAATTTTCTTCACTCCTTTGAAGTTTCAAAAACCTCAAATGAGCCAATTGATATGACGGCTGTTGTGGAAACAACCAACATCAAAGTTACTCCTCTTGAAGTTCTCATCAAACCTCGTTTGTCTCCCAATTATTATTAA 1566 0.3851 MDFSQNTIAIGLLSTIFLFIILFHHSKSNKTKQPPMVAGTWPIIGHLPLFSKSQATHHLLGSMADKYGPIFTIKLGTATTLAINNWKTAKECYTTNDIAVAYRPNLVAFEHMTYNYAMLGFAPYGPFWREMRKIVTLNFLSNHQINLLTHICVSEVQTSIKELYNFWKNRKDENGYLLVEMKKWLNELAFNIVLRMVAGKRYFGESVMVKEEEANRCLNALRDYMRLTGVFPIADAVPFLRWFDFGGHEKNMKQNFKELDGVITEWLDEHKKKKSEGVDKSKEGQDFMDVMLSTIDGTNIHGFHSDTVIKATTMALVLGATDTSSVTHTWALCLLLNNPHTLEKVKEEIDLHIGKERLCILESDINKLVYLQAVVKETLRLYPASPLSGIREFREDCQIGGYDVKKGTRLFTNLWKIQTDPSVWPDPLEFKPERFLTTHKDVDVRGNHFELLPFGSGRRMCPGISFALRSAYLTLANFLHSFEVSKTSNEPIDMTAVVETTNIKVTPLEVLIKPRLSPNYY* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1145 521 Gene3D Cytochrome P450 27 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 521 - -
Mtr6g1145 521 SUPERFAMILY Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Mtr6g1145 521 Pfam Cytochrome P450 40 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PANTHER CYTOCHROME P450 82C3-RELATED 1 521 - -
Mtr6g1145 521 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1145 521 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1145 Mtr-Chr6 15790183 15794187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1145 1 521 Cytochrome P450 AT4G31970 46.869 1.10e-174 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1145 - - gmx:100802193 736.102