Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1072 ATGGCTTTTCAAATTCTCAGTTTTTTCACTATTTTTATGTTCATGATAATTGCACTCAAAATTAGGAATCATTACAAAAAATATGACTTCGGTAAAAATATACCTCCAGGGCCATGGAAGTTACCCATTTTAGGAAATATTCTCCATCTTGTTGCAAGAAACCCACCTAGAAGATTAAGAGATTTAGCCAAAAAATATGGACCCTTGATGCATCTTCAACTTGGTGAGATCTTTTTCATTGTTATTTCTTCACCAGAAGTTGCAAAGGAGGTTTTAAAAACACATGATATTATCTTTGCATCAAGGCCTCATCTTCTTGCCACAGACATAGCATCTTACAATTCAATGGATATAGCTTTTTCACCTTATGGTGATTATTGGAGACAACTTAGAAAGATTTGTGCTATTGAGCTATTAAGCACAAGAAGAGTCAAATCTCTTTGGCCAGTAAGACAAAAAGAGATCAATTATCTCCTAAAGAAGATTGCTTCAAATGAAGGATCAGAGTTCAATCTCACTGAAGAAGTTATGTCAATGATGTATACATTCACTTCAAAGGCTGCATTTGGTAAGAAATATTTGGAACAAGAAGAGTTCATATCAGTTGTAAAACAACTTATAAAACTTGCTGGAGGGTTCTATATTGGTGACTTGTTTCCTTCAGCTCAATGGATTCAAAATATATCTGGATTGAAGCCTAAGCTTGAGAAGTTAAGCCAACAAGTAGACAGGATACTGGGCCATATCATCACTGACCATAAAGAGAAAATTTCAAGAAGAGAAAACGAAGGTTTGCCTGAAGCTGAGGAAGATCTGATTGATTGTCTCCTAAAATTTGTGGAAAGTGGCAGTGACATGGATTTTGAATTAACTATTGATAATGTCAAGGCTATAATTCTGGATGTGTTCTCTGCTGGAAGTGAGACTGCAGCAACTACTGTTAATTGGGCAATGGCTGAGATGATAAAGGATCCAAGAATTTTGAAGAAAGCACAAGCTGAAGTAAGAAATGGATTTGATAGGAGAGGAATGGTTGATGAAGCTACGATTGCTGAGTTCAAATATTTAAAATCAATCATCAAAGAGTCATTAAGATTACACCCTTCCGTTCCTCTCCTTCTTCCAAGGGAAAGTCGAGAAGCTTGTGAGATTAATGGCTATCGTATACCTGTAAAAAGTAGAGTCCTAATAAATGCTTGGGCAATGGGAAGGGATCCTAAATATTGGAATGACCCAGATAAGTTTTATCCTGAAAGGTTTATTGATAGCTCTATTGATTTCTCAGGAACTAATTTTGAGTTCATTCCATTTGGTGCTGGTAGGAGAATTTGTCCCGGCATGAACTATGGTTTGGCTAATGTAGAGCAGGTCCTTGCACTTTTATTGTATCATTTTGATTGGAAACTTCCCAATGGAATGAAAAACGAGGAATTAGAGTTGGGAGAAGAGTTTGGAGTTACTATGGCAAGAAAGGGTGACCTTTACTTGATTCCCATTACATCTCATCAGTCGCTTGTAATCTAA 1524 0.3642 MAFQILSFFTIFMFMIIALKIRNHYKKYDFGKNIPPGPWKLPILGNILHLVARNPPRRLRDLAKKYGPLMHLQLGEIFFIVISSPEVAKEVLKTHDIIFASRPHLLATDIASYNSMDIAFSPYGDYWRQLRKICAIELLSTRRVKSLWPVRQKEINYLLKKIASNEGSEFNLTEEVMSMMYTFTSKAAFGKKYLEQEEFISVVKQLIKLAGGFYIGDLFPSAQWIQNISGLKPKLEKLSQQVDRILGHIITDHKEKISRRENEGLPEAEEDLIDCLLKFVESGSDMDFELTIDNVKAIILDVFSAGSETAATTVNWAMAEMIKDPRILKKAQAEVRNGFDRRGMVDEATIAEFKYLKSIIKESLRLHPSVPLLLPRESREACEINGYRIPVKSRVLINAWAMGRDPKYWNDPDKFYPERFIDSSIDFSGTNFEFIPFGAGRRICPGMNYGLANVEQVLALLLYHFDWKLPNGMKNEELELGEEFGVTMARKGDLYLIPITSHQSLVI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1072 507 Gene3D Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Mtr6g1072 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 501 - -
Mtr6g1072 507 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PANTHER CYTOCHROME P450 71B11-RELATED 7 501 - -
Mtr6g1072 507 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g1072 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1072 Mtr-Chr6 14803689 14805614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1072 11 498 Cytochrome P450 AT3G26310 39.600 2.52e-132 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1072 - - mtr:MTR_3g058060 660.218