Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1061 ATGGATTTCAATGATGGCTATGTATCGAAAGAGCATCTCGAGCTTCATCGATCTGCATCAGAAAGTGTTGATCCAGTAACTGTTTCTCCTTTGCAACTTTCTTCTCCCAAGTCTCCAAGGTCCCCAAAGGCGCAAATCAACGGAAGCAATTCAAGTCCAAAAAATAATAGGCAATCACATTCTTCAAACGATGGACGTCCAAAGAAAGGTGGTTCTGGTGGTAAAGGCACCTGGGGTGGATTGCTTGAGACAGATGACATGAACTTACTTGACCCCAATGATCCGAACTATGACAGCACCGAGGAATTCGATGATTCAAATGATAAGAAAACGAACGCTGCATTGGAAGAGTACAAGAAAAAAGCTACAATAATAGTGGAAGAATACTTTGCCACAGACGACGTTGTCGCAACAATGAGTGAAGTTAGAGAAATTGGTAAACCAGAATACAGCTACTATTTTGTCAAAAAGCTTGTCTCAATGTCAATGGACAGACACGACAAAGAAAAAGAAATGGCTGCAATTCTCTTATCTGCACTTTATGCTGACATAATTCATCCTTCACAAGTTTACAAAGGATTCACCAAATTAGTCGAATCGGCTGATGATTTGATTGTAGATATACCGGACACGGTTGATATTCTAGCACTTTTCATAGCTCGAGCTGTGGTTGACGACATTCTTCCGCCGGCGTTTTTGAAGAAACAGATAGCAAACTTACCAAATGATTCTAAAGGAGCTGAGGTCTTAAAGAAAGCTGAGAAAAGCTATTTAACAGCACCTTTACACGCTGAAATCATCGAGCGGCGTTGGGGAGGTAGTAAGAATACAACAGTTGATGATGTGAAGGCAAGGATAAATAATTTCTTGAAAGAATATGTTGTAAGTGGCGACAAGACAGAAGCTTTTAGATGCATCAAAGACTTGAATGTTCCATTCTTCCATCATGAAATAGTGAAAAGAGCTCTTATAATGGCGATGGAAAAGCGACAAGCGGAAACGCCGTTATTAGACTTATTGAAAGAAGCTGCTGAAAAAGGTTTCATTAACACAAGCCAAATGTCAAAAGGGTTCACAAGGTTGATTGAAACCGTCGATGATTTATCGCTCGATATACCGAATGCACGCGGAATACTTCAACAACTAATGTCGAAAGCAGCTTCCGATGGTTGGTTATGTGTTTCATCACTAAAACCACTCTCAATTGAGCCTGAAAAGAACACAATACAAGAAAATGTTGCTAAAAGTTTCAAGATGAAAACTCAATCCATCATTCAAGAGTACTTTTTATCAGGTGATATATTTGAAGTGATTAGTTGTTTAGAACAAGAGAACAACAAAAACTGTGGTGAACTAAATGCAATCTTCGTCAAAAAGCTAATAACATTAGCAATGGATAGAAAGAATAGAGAGAAAGAAATGGCTTCGGTGTTACTTTCATCGCTTTGTTTTCCACCTGACGATGTTGTCAATGGTTTTGTGATGCTAATTGAATCAGCAGATGATACTGCTTTAGACAATCCTGTAGTTGTTGAAGATCTTGCTATGTTTCTAGCAAGATCGGTTGTTGACGAAGTTTTAGCACCGCAACAGCTTGAAGATATCGGAACACAATGTATAAGTCAAGATTCCATTGGAAGCAAAGTGCTACAAATGGCTAAGTCATTGCTAAAAGCAAGACTTGCTGGTGAGAGAATCTTGAGGTGTTGGGGTGGGGGTGGGGGTGGAAGTAGCAAACCAGGATGGGAAATTGAAGATGTGAAAGATATGATAGGGAAATTGTTGGAGGAATATGAATCTGGTGGTGATATAAAAGAGGCTTGTAGATGCATGAAAGAGTTAGGTATGCCATTTTTTCATCATGAGGTTGTGAAGAAAAGTTTGGTGAAAATTATTGAAAAGAAGAATGAGAGATTGTGGGGTTTACTTAAAGAGTGTTTTGAATCTGGATTAATTACTATGTATCAAATGGTTAAAGGCTTTGGAAGAGTTGAAGAAGCTCTTGATGATTTGGCTTTGGATGTTCCTGATGCTAAGAATCAGTTTGCATATTATGTTGAAAAAGCAAAGAATGAAGGATGGTTAGATAGTTCATTTTGTTTCAAGAATGCTACAGAGAATGGCACATGCTAA 2133 0.3858 MDFNDGYVSKEHLELHRSASESVDPVTVSPLQLSSPKSPRSPKAQINGSNSSPKNNRQSHSSNDGRPKKGGSGGKGTWGGLLETDDMNLLDPNDPNYDSTEEFDDSNDKKTNAALEEYKKKATIIVEEYFATDDVVATMSEVREIGKPEYSYYFVKKLVSMSMDRHDKEKEMAAILLSALYADIIHPSQVYKGFTKLVESADDLIVDIPDTVDILALFIARAVVDDILPPAFLKKQIANLPNDSKGAEVLKKAEKSYLTAPLHAEIIERRWGGSKNTTVDDVKARINNFLKEYVVSGDKTEAFRCIKDLNVPFFHHEIVKRALIMAMEKRQAETPLLDLLKEAAEKGFINTSQMSKGFTRLIETVDDLSLDIPNARGILQQLMSKAASDGWLCVSSLKPLSIEPEKNTIQENVAKSFKMKTQSIIQEYFLSGDIFEVISCLEQENNKNCGELNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPPDDVVNGFVMLIESADDTALDNPVVVEDLAMFLARSVVDEVLAPQQLEDIGTQCISQDSIGSKVLQMAKSLLKARLAGERILRCWGGGGGGSSKPGWEIEDVKDMIGKLLEEYESGGDIKEACRCMKELGMPFFHHEVVKKSLVKIIEKKNERLWGLLKECFESGLITMYQMVKGFGRVEEALDDLALDVPDAKNQFAYYVEKAKNEGWLDSSFCFKNATENGTC* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1061 710 SUPERFAMILY ARM repeat 278 398 IPR016024 -
Mtr6g1061 710 Pfam MA3 domain 119 229 IPR003891 -
Mtr6g1061 710 Pfam MA3 domain 417 527 IPR003891 -
Mtr6g1061 710 Pfam MA3 domain 283 392 IPR003891 -
Mtr6g1061 710 Pfam MA3 domain 588 696 IPR003891 -
Mtr6g1061 710 MobiDBLite consensus disorder prediction 16 108 - -
Mtr6g1061 710 SUPERFAMILY ARM repeat 114 275 IPR016024 -
Mtr6g1061 710 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 705 - -
Mtr6g1061 710 ProSiteProfiles MI domain profile. 281 402 IPR003891 -
Mtr6g1061 710 Gene3D - 268 398 - -
Mtr6g1061 710 Gene3D - 568 702 - -
Mtr6g1061 710 MobiDBLite consensus disorder prediction 22 60 - -
Mtr6g1061 710 SUPERFAMILY ARM repeat 582 701 IPR016024 -
Mtr6g1061 710 ProSiteProfiles MI domain profile. 416 537 IPR003891 -
Mtr6g1061 710 SMART ma3_7 118 229 IPR003891 -
Mtr6g1061 710 SMART ma3_7 587 696 IPR003891 -
Mtr6g1061 710 SMART ma3_7 282 393 IPR003891 -
Mtr6g1061 710 SMART ma3_7 417 528 IPR003891 -
Mtr6g1061 710 Gene3D - 404 560 - -
Mtr6g1061 710 Gene3D - 105 258 - -
Mtr6g1061 710 ProSiteProfiles MI domain profile. 117 238 IPR003891 -
Mtr6g1061 710 ProSiteProfiles MI domain profile. 586 705 IPR003891 -
Mtr6g1061 710 PANTHER PROGRAMMED CELL DEATH 4 1 705 IPR039778 GO:0045892
Mtr6g1061 710 SUPERFAMILY ARM repeat 415 574 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1061 Mtr-Chr6 14555431 14560001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1061 594 683 Eukaryotic Initiation Factors Gene Family AT4G30680 32.258 1.44e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1061 - - gmx:102668745 1138.64