Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1010 ATGGATGGTAATGTTCCTGAAGAAGCCACACAGTCAACAAATGTGGAAATATCTGAAGAAGATATTTTAGTTGCTGCTCCTAATGTTGGTGTGGAATTAAATAGTGAACCTTGTAAGGGGATGGAATTCAAATCTGTGGAAAAGGTTAGAGAATTTTATAATTCATTTGCAAAAAGGATGGGTTTTGGAGTACGTGTTCGCTCAACTAAACCAAAGAGAGCTGTCTTTGTATGTTGTAATGAAGGTCATCATATAGTGAAAAGTTCAACAAACAAAGAAATCCAAGATGGCACAAATCAAACTAAAAGAAAGTGTTCTACTTCTCGAACTGGTTGTCTAGCCACACTTGTTGTTAAAAGAGGTACATTAGAAGGAAATTGGATTATATGTTCATTTAAGAATGATCATAACCATCCCATGGTTAGCCCTAAAAGTGTGTCTTATATGCGGTGTCATAAAAGCATGAATGGTGCTGCAAAAAGTCTTGTTGAACATTTTAAGGAAGAAGGTATACCGACAGGAAAGGTTGCTACAATGTTCAGTGAAGGGGACTTGGCTTTCTCTAATAGGGATTGTTGGAATCATGTTAGAAGTCTTCGAAGAAAAAATTTAGACGTTGGAGATGCTCAAGCTGTTTTTAATTATTGTAAACAGAAACAGGTAGAAAATTCAAACTTTTTCTATGAAATCCAATGTGATGAAGATTCTCGGATGATAAACTTTTTTTGGGTTGATGCTAAATCAAGATTAGCTTACCAACAATTTGGAGATGTAATATCTTTTGACACCACATATAAGACTAACAAGTATAGTATGCCATTTGCCCTGTTTGTTGGATTGAATAATCATTATCAATCAATTTTATTTGGTTGTGTTTTACTACAAGATGAGTCAGAACGCTCGTTTATATGGTTGTTTGAAACTTTTCTTAAGGCAATGGATGGTAAAAAGCCCAAATCTGTCATAACTGACCAGGATTTGGCTATGAAAGGTGCTTTAGCCAATGTTTTTCCAGAAACTAGACATCGCCTCTTCTTATGGCATATTAGGAAAAAATTTGCTGAAAAGTTAGCTCATGTTTATCATAAAAATTCCACTTTCAAGCGAGAATTGAAAAAATGCATTAATGTTTCACCAAGTATAGAAAGTTTTGAAGAAAACTAG 1164 0.3445 MDGNVPEEATQSTNVEISEEDILVAAPNVGVELNSEPCKGMEFKSVEKVREFYNSFAKRMGFGVRVRSTKPKRAVFVCCNEGHHIVKSSTNKEIQDGTNQTKRKCSTSRTGCLATLVVKRGTLEGNWIICSFKNDHNHPMVSPKSVSYMRCHKSMNGAAKSLVEHFKEEGIPTGKVATMFSEGDLAFSNRDCWNHVRSLRRKNLDVGDAQAVFNYCKQKQVENSNFFYEIQCDEDSRMINFFWVDAKSRLAYQQFGDVISFDTTYKTNKYSMPFALFVGLNNHYQSILFGCVLLQDESERSFIWLFETFLKAMDGKKPKSVITDQDLAMKGALANVFPETRHRLFLWHIRKKFAEKLAHVYHKNSTFKRELKKCINVSPSIESFEEN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1010 387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 31 385 - -
Mtr6g1010 387 Pfam MULE transposase domain 258 352 IPR018289 -
Mtr6g1010 387 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Mtr6g1010 387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 385 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1010 Mtr-Chr6 13645874 13647037 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g1010 MULE 1.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1010 - - qlo:115970754 463.766