Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1005 ATGTATTTAACTAAACATGTATTTAAGATGAGCAAGCAGTACCTTGCAAATGTTGCTTTGAAAATCAATGTGAAGGTTTGGGGTAGGAATACAGTGCTTGGTGATGCACTTTCTCGACGCATTCCACTAGTTAGTGATAGGCCTTCGATCATTTTTGGCGCTGATGTTACTCATCCACACCCTGGAGAGGACTCAAGCCCATCAATAGCAGCTGTTGTTGCTTCTCAAGATTGGCCTGAAATTACCAAGTATGCTGGAATATCTTAA 267 0.412 MYLTKHVFKMSKQYLANVALKINVKVWGRNTVLGDALSRRIPLVSDRPSIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGIS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1005 88 Pfam Piwi domain 3 86 IPR003165 GO:0003676
Mtr6g1005 88 Gene3D - 40 88 IPR036397 GO:0003676
Mtr6g1005 88 SUPERFAMILY Ribonuclease H-like 5 84 IPR012337 -
Mtr6g1005 88 ProSiteProfiles Piwi domain profile. 1 88 IPR003165 GO:0003676
Mtr6g1005 88 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 3 87 - -
Mtr6g1005 88 PANTHER PROTEIN ARGONAUTE 1A 3 87 - -
Mtr6g1005 88 Gene3D - 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1005 Mtr-Chr6 13573385 13574436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1005 3 87 Eukaryotic Initiation Factors Gene Family AT1G48410 94.118 2.27e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1005 K11593 - dcr:108217917 163.31