Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0997 ATGTGGTTTGGTCCAAACAAAATTACGGCAGTGACTGCAATAGGAAACCAAACTGATCATTTGGCATTGCTCAAATTCAAAGAATCAATTTCTAGTGACCCATACAATGCTCTTGAATCTTGGAATTCTTCCATCCATTTCTGCAAGTGGCAAGGAATCACATGCAGCCCCATGCATGAACGAGTTACAGAGTTGAGCCTAAAAAGATATCAGTTACATGGATCTTTATCTCCCCATGTTTGCAATCTCACTTTTCTGAAAACTCTCGACATTGGAGACAACAACTTCTTCGGAGAAATTCCACAGGAGTTGGGTCAGTTGCTACATTTGCAACGACTTTCTCTCAGCAATAACTCTTTTGTAGGTGAGATTCCAACAAACTTGACATATTGCTCCAATCTCAAATTATTGTTTTTGAATGGGAACCATCTCAATGGTAAAATACCAACTGAAATCGGCTCTTTGAAAAAGCTTCAAAGAATGACTGTTTGGAGAAACAAGTTAACTGGTGGAATCCCTTCATTCATAGGAAATCTTTCAAGCTTAACACGTCTATCAGCTTCTCGTAACAATTTTGAGGGAGATATTCCACAAGAAATATGTTGCTGCAAACACTTGACATTTTTAGCTTTGGGTGAGAACAATTTGTCCGGTAAGATTCCTTCTTGTCTTTATAATATCTCATCACTTATTGCCCTTGCGGTAACACAAAATAACCTTCATGGCTCTTTTCCACCCAACATGTTCCACACCCTCCCCAATCTTCAAATATTCGATTTTGCAGCAAATCAATTCTCAGGTCCAATCCCTATTTCGATTGCAAATGCTTCTGCCCTACAAATATTAGACTTAGGAGACAACATGAATTTGGTTGGACAAGTTCCAAGTCTAGGGAATTTACAAGACCTTTCCAATCTAAATTTGCAATCAAACAATTTAGGTAACATTTCAACTATGGATTTAGAATTTCTAAAATATTTGACTAATTGCAGTAAACTACACAAGCTTTCGATATCTTATAATAATTTTGGAGGCCATTTGCCAAATTCCATAGGGAATTTATCCACTGAACTTATTCAACTGTATATGGGGGATAATCAAATATCAGGAAAAATTCCTGCAGAATTTGGACGTCTAATTGGCTTAATTCTATTGACCATGGAGTCTAACTGCTTGGAGGGAATTATTCCAACTACTTTTGGGAAGTTCCAAAAGATGCAGGTATTATATTTGTGGAAAAACAAGTTGTCAGGAGATATTCCACCGTTCATAGGGAATCTCAGTCAATTGTTTAAATTAGAATTAGATCATAACATGTTTCAAGGAAGTATTCCTCCAAGCATAGGAAACTGTCAAAATTTACAATATCTGTATCTTTTTCATAATAAGCTTAGAGGAACCATACCTGTAGAGGTTTTAAATATTTTTTCATTATTAGTATTAGACCTGTCACATAACTCTTTGAGCGGTACCTTACCAACAGAAGTGGGTATGTTAAAAAATATTGAAGATTTAGATGTCTCTGAGAATCATCTATCTGGTGATATTCCGAGAGAAATTGGTGAATGTACAATCTTAGAATATATTCGTTTGCAAAGGAACATCTTCAATGGAACAATACCGTCCTCTTTAGCTTCTCTCAAAGGTCTTCAATATTTAGACGTTTCAAGAAATCAATTGTCTGGATCAATTCCTGATGGTATGCAAAATATCTCTGTTTTAGAATATTTGAATGTTTCTTTTAACATATTGGAAGGAGAGGTACCGACAAATGGTGTATTTGGAAATGCAAGCCAAATAGAAGTGATTGGAAACAAAAAGCTTTGTGGAGGTATTTCCCATCTGCATCTACCACCATGCCCTATCAAGGGTAGGAAACATGCAAAGCAACACAAGTTCAGGTTGATAGCAGTGATAGTTAGTGCGGTTTCTTTTATTCTCATACTTTCATTTATCATAACTATCTACATGATGAGGAAAAGAAATCAAAAGAGATCTTTTGATTCACCTACAATTGATCAACTAGCTAAGGTTTCATACCAAGAATTACATGTTGGAACCGATGGATTCTCAGATAGAAACTTGATCGGATCAGGAAGTTTTGGTTCCGTATACAGAGGAAATATTGTTTCAGAAGATAATGTTGTTGCAATAAAAGTCTTGAACCTCCAGAAAAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAACGCACTCAAAAATATTAGACACCGAAATTTGGTTAGGGTTTTAACATGTTGTTCTAGCACAAATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAATACATGGAAAATGGAAGCTTAGAACAGTGGTTACATCCTCAAATTTTGAATGCGAGTCCTCCAACAACATTGAACCTTGGTCATAGATTAAACATCATCATCGATGTTGCTTCTGCATTACATTATCTTCATCGAGAATGTGAGCAGTTAATCCTTCACTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGGTGACATGGTTGCTCATGTGAGTGATTTTGGAATAGCAAGACTTGTCTCAACCATTTCCGGTACCTCTAATAAGAATACTAGCACAATTGGAATAAAAGGAACAGTTGGTTATGCTCCTCCGGAGTATGGGATGGGTTCAGAAGTATCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGCTGGAAATGCTTACTGGTAGAAGACCCACTGATGAACTTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTACAAATTCATTTCCTGATAATCTAATAAAGATGTTGGATCCACATCTTTTACCAAGAGCTGAAGATGGAGCAAGAGAAGATGGAAATCATGAGATTCTTATTCCAACTGTAGAGGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTTTATGTTCATTGGAATCACCAAAAGAAAGAATGAATATTGTCGATGTCACTAGAGAGCTTACCACAATCCAGAAGGTCTTTCTAGCTGGTTTTGAACAAAATTTCTAA 3015 0.3625 MWFGPNKITAVTAIGNQTDHLALLKFKESISSDPYNALESWNSSIHFCKWQGITCSPMHERVTELSLKRYQLHGSLSPHVCNLTFLKTLDIGDNNFFGEIPQELGQLLHLQRLSLSNNSFVGEIPTNLTYCSNLKLLFLNGNHLNGKIPTEIGSLKKLQRMTVWRNKLTGGIPSFIGNLSSLTRLSASRNNFEGDIPQEICCCKHLTFLALGENNLSGKIPSCLYNISSLIALAVTQNNLHGSFPPNMFHTLPNLQIFDFAANQFSGPIPISIANASALQILDLGDNMNLVGQVPSLGNLQDLSNLNLQSNNLGNISTMDLEFLKYLTNCSKLHKLSISYNNFGGHLPNSIGNLSTELIQLYMGDNQISGKIPAEFGRLIGLILLTMESNCLEGIIPTTFGKFQKMQVLYLWKNKLSGDIPPFIGNLSQLFKLELDHNMFQGSIPPSIGNCQNLQYLYLFHNKLRGTIPVEVLNIFSLLVLDLSHNSLSGTLPTEVGMLKNIEDLDVSENHLSGDIPREIGECTILEYIRLQRNIFNGTIPSSLASLKGLQYLDVSRNQLSGSIPDGMQNISVLEYLNVSFNILEGEVPTNGVFGNASQIEVIGNKKLCGGISHLHLPPCPIKGRKHAKQHKFRLIAVIVSAVSFILILSFIITIYMMRKRNQKRSFDSPTIDQLAKVSYQELHVGTDGFSDRNLIGSGSFGSVYRGNIVSEDNVVAIKVLNLQKKGAHKSFIVECNALKNIRHRNLVRVLTCCSSTNYKGQEFKALVFEYMENGSLEQWLHPQILNASPPTTLNLGHRLNIIIDVASALHYLHRECEQLILHCDLKPSNVLLDGDMVAHVSDFGIARLVSTISGTSNKNTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDELFEDGQNLHNFVTNSFPDNLIKMLDPHLLPRAEDGAREDGNHEILIPTVEECLVSLFRIGLLCSLESPKERMNIVDVTRELTTIQKVFLAGFEQNF* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0997 1004 Gene3D Ribonuclease Inhibitor 167 229 IPR032675 -
Mtr6g0997 1004 Gene3D Ribonuclease Inhibitor 230 299 IPR032675 -
Mtr6g0997 1004 PRINTS Leucine-rich repeat signature 478 491 - -
Mtr6g0997 1004 PRINTS Leucine-rich repeat signature 547 560 - -
Mtr6g0997 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Mtr6g0997 1004 SMART serkin_6 690 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0997 1004 SUPERFAMILY L domain-like 357 610 - -
Mtr6g0997 1004 SUPERFAMILY Protein kinase-like (PK-like) 665 989 IPR011009 -
Mtr6g0997 1004 Pfam Protein kinase domain 692 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0997 1004 ProSiteProfiles Protein kinase domain profile. 690 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0997 1004 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
Mtr6g0997 1004 Gene3D Transferase(Phosphotransferase) domain 1 772 998 - -
Mtr6g0997 1004 Pfam Leucine rich repeat N-terminal domain 17 56 IPR013210 -
Mtr6g0997 1004 Gene3D Ribonuclease Inhibitor 315 621 IPR032675 -
Mtr6g0997 1004 Gene3D Phosphorylase Kinase; domain 1 652 771 - -
Mtr6g0997 1004 PANTHER OS04G0122200 PROTEIN 10 998 - -
Mtr6g0997 1004 Gene3D Ribonuclease Inhibitor 15 166 IPR032675 -
Mtr6g0997 1004 SMART LRR_typ_2 107 131 IPR003591 -
Mtr6g0997 1004 SMART LRR_typ_2 499 523 IPR003591 -
Mtr6g0997 1004 SMART LRR_typ_2 179 203 IPR003591 -
Mtr6g0997 1004 SMART LRR_typ_2 427 451 IPR003591 -
Mtr6g0997 1004 SMART LRR_typ_2 547 570 IPR003591 -
Mtr6g0997 1004 SMART LRR_typ_2 379 402 IPR003591 -
Mtr6g0997 1004 SUPERFAMILY L domain-like 17 313 - -
Mtr6g0997 1004 Pfam Leucine rich repeat 526 582 IPR001611 GO:0005515
Mtr6g0997 1004 Pfam Leucine rich repeat 405 464 IPR001611 GO:0005515
Mtr6g0997 1004 PANTHER LRR RECEPTOR-LIKE KINASE 10 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0997 Mtr-Chr6 13401784 13405051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0997 16 997 Receptor kinase-like Gene Family AT3G47570 45.217 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr6g0997 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0997 - - mtr:MTR_6g036870 1529.61