Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0991 ATGTTCCACACCCTCCCCAATCTTAAATTATTACATTTTGCATCAAATCAATTCTCTGGTCCAATCCCTATTTCGATTGATAATGCTTCTGCCCTACAAATATTAGACTTATCAAAAAACATGAATTTGGTTGGACAAGTTCCAAGTCTAGGGAATTTACAAAATCTTTCCATTCTAAGTTTGGGATTCAACAATTTAGGTAACATTTCAACTAAGGATTTAGAGTTTTTAAAATATTTGACAAATTGCAGTAAACTATACGTGCTTTCAATAGATTCTAATAATTTTGGAGGACATTTGCCAAATTCCATAGGCAACTTTTCCACTGAACTTAAATATTTATTTATGGGGGGTAATCAGATATCAGGAAAAATTCCTGACGAATTAGGAAATCTAGTTGGCTTAATTCTCTTGACCATGGAGTATAACTTCTTTGAGGGAATTATTCCAACTACTTTTGGAAAGTTCCAAAAGATGCAGCTTTTATCTTTGGATGGAAACAAATTGTCTGGAGGTATTCCACCCTTCATAGGCAATCTCAGTCAATTGTTTAAATTAGTATTAGATCATAATATGTTTCAAGGAATTATTCCTCCAAGCTTAGGAAACTGTCAAAATTTACAATATCTAGATCTGTCTCATAATAAGCTTAGAGGAACCATACCTGTAGAGGTTTTAAATCTGTTTTCTTTATCAATCTTATTGAACTTGTCACATAACTCTTTGAGCGGTACTTTACCAAGAGAAGTGGGTATGTTAAAAAATATTGCAGAATTAGATGTCTCTGAGAATCATCTATCTGGTGATATTCCGAGAGAAATTGGTGAATGTACAAGCTTAGAATATATTCATTTGCAAAGGAACTCCTTTAACGGAACAATACCGTCCTCTTTGGCTTCTCTCAAAGGTCTTCGATATTTAGACCTTTCAAGAAATCAATTGTCTGGATCAATTCCTGATGGTATGCAAAATATCTCATTTTTGGAATATTTTAATGTTTCTTTTAACATGTTGGAAGGAGAGGTACCGACAAAAGGTTTATTTGGAAATTCAACCCAAATAGAATTGATTGGAAACAAAAAGCTTTGTGGAGGCATTTCCCACCTGCATCTACCACCATGCTCTATCAAGGGTAGGAAACATGCAAAACAACACAAGTTCAGGTTGATAGCAGTCATAGTTAGTGTGGTTTCTTTTATTCTCATACTTTCATTTATCATAACTATCTACATGATGAGGAAAAGAAATCAAAAGAGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCAAGAATTACACGTAGGAACCGATGAATTCTCGGATAGAAACATGATCGGATCAGGAAGTTTTGGTTCCGTATACAAAGGAAATATTGTTTCAGAAGATAATGTTGTTGCAGTAAAGGTCTTGAACCTCCAAACAAAGGGCGCTCACAAAAGTTTCATTGTTGAATGTAACGCACTCAAAAATATTAGACACAGAAATTTGGTTAAGGTTTTAACATGTTGTTCTAGCACAAATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAATACATGAAAAATGGAAGCTTAGAACAGTGGTTACATCCTGAAACTTTGAATGCAAATCCTCCAACAACATTGAACCTTGGTCTTAGATTAAACATCATCATCGATGTTGCTTCTGCATTACATTATCTTCATCGAGAATGTGAGCAGTTAATCCTCCATTGTGATCTAAAACCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATTTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACCATTTCTGGTACCTCTCATAAGAATACTAGCATAATCGGAATAAAAGGAACAGTTGGTTATGCTCCACCGGAGTATGGGGTGGGTTCAGAAGTATCCACTTGTGGTGACATGTATAGCTTTGGAATCCTTATGCTGGAAATGCTTACTGGTAGAAGACCCACTGATGAACTTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTACAATTTCATTTCCTGATAATCTTATAAAGATTTTGGATCCACATCTTTTACCAAGAGCTGAAGAAGGAGGAATAGAAGATGGAATTCATGAGATTCTTATTCCAAATGTAGAGGAGTGCTTAACTTCACTTTTTAGGATTGGACTTTTATGTTCATTGGAATCAACAAAAGAAAGAATGAATATTGTAGATGTCAATAGAGAGCTTACCACAATCCAGAAGGTCTTTTTAGCTGGTGAGATGAACTGA 2271 0.3479 MFHTLPNLKLLHFASNQFSGPIPISIDNASALQILDLSKNMNLVGQVPSLGNLQNLSILSLGFNNLGNISTKDLEFLKYLTNCSKLYVLSIDSNNFGGHLPNSIGNFSTELKYLFMGGNQISGKIPDELGNLVGLILLTMEYNFFEGIIPTTFGKFQKMQLLSLDGNKLSGGIPPFIGNLSQLFKLVLDHNMFQGIIPPSLGNCQNLQYLDLSHNKLRGTIPVEVLNLFSLSILLNLSHNSLSGTLPREVGMLKNIAELDVSENHLSGDIPREIGECTSLEYIHLQRNSFNGTIPSSLASLKGLRYLDLSRNQLSGSIPDGMQNISFLEYFNVSFNMLEGEVPTKGLFGNSTQIELIGNKKLCGGISHLHLPPCSIKGRKHAKQHKFRLIAVIVSVVSFILILSFIITIYMMRKRNQKRSFDSPTIDQLAKVSYQELHVGTDEFSDRNMIGSGSFGSVYKGNIVSEDNVVAVKVLNLQTKGAHKSFIVECNALKNIRHRNLVKVLTCCSSTNYKGQEFKALVFEYMKNGSLEQWLHPETLNANPPTTLNLGLRLNIIIDVASALHYLHRECEQLILHCDLKPSNVLLDDDMVAHLSDFGIARLVSTISGTSHKNTSIIGIKGTVGYAPPEYGVGSEVSTCGDMYSFGILMLEMLTGRRPTDELFEDGQNLHNFVTISFPDNLIKILDPHLLPRAEEGGIEDGIHEILIPNVEECLTSLFRIGLLCSLESTKERMNIVDVNRELTTIQKVFLAGEMN* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0991 756 Gene3D Transferase(Phosphotransferase) domain 1 526 751 - -
Mtr6g0991 756 PANTHER LRR RECEPTOR-LIKE KINASE 3 751 - -
Mtr6g0991 756 SMART serkin_6 444 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0991 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
Mtr6g0991 756 SUPERFAMILY L domain-like 2 144 - -
Mtr6g0991 756 PANTHER OS04G0122200 PROTEIN 3 751 - -
Mtr6g0991 756 Pfam Leucine rich repeat 159 217 IPR001611 GO:0005515
Mtr6g0991 756 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
Mtr6g0991 756 ProSitePatterns Protein kinases ATP-binding region signature. 450 473 IPR017441 GO:0005524
Mtr6g0991 756 Gene3D Ribonuclease Inhibitor 1 375 IPR032675 -
Mtr6g0991 756 SUPERFAMILY Protein kinase-like (PK-like) 419 743 IPR011009 -
Mtr6g0991 756 SUPERFAMILY L domain-like 109 364 - -
Mtr6g0991 756 SMART LRR_typ_2 253 277 IPR003591 -
Mtr6g0991 756 SMART LRR_typ_2 301 324 IPR003591 -
Mtr6g0991 756 SMART LRR_typ_2 53 76 IPR003591 -
Mtr6g0991 756 SMART LRR_typ_2 180 204 IPR003591 -
Mtr6g0991 756 SMART LRR_typ_2 205 228 IPR003591 -
Mtr6g0991 756 ProSiteProfiles Protein kinase domain profile. 444 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0991 756 Pfam Protein kinase domain 446 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0991 756 ProSiteProfiles Leucine-rich repeat profile. 206 227 IPR001611 GO:0005515
Mtr6g0991 756 Gene3D Phosphorylase Kinase; domain 1 425 525 - -
Mtr6g0991 756 PRINTS Leucine-rich repeat signature 207 220 - -
Mtr6g0991 756 PRINTS Leucine-rich repeat signature 301 314 - -
Mtr6g0991 756 SMART LRR_sd22_2 253 285 - -
Mtr6g0991 756 SMART LRR_sd22_2 301 327 - -
Mtr6g0991 756 SMART LRR_sd22_2 53 71 - -
Mtr6g0991 756 SMART LRR_sd22_2 204 225 - -
Mtr6g0991 756 SMART LRR_sd22_2 108 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0991 Mtr-Chr6 13351912 13354291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0991 5 751 Receptor kinase-like Gene Family AT3G47570 47.230 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr6g0991 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0991 - - mtr:MTR_6g036870 1090.87