Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0990 ATGAAGTCTTTTTCTTTGTTGTCACCTACACTTTTATACCTTCATCCCCTTTTTATGCTTACCTTAAATTTAATGTGGTTTGGTCCAAACAAAATTAGGGCATTGGCTGCAATAGGAAACCAAACTGATCATTTGGCATTGCTCAAATTCAAAGAATCAATTTCCAGTGACCCATACAATGCTCTTGAATCTTGGAATTCTTCCATCCATTTCTGCAAGTGGCATGGAATCACATGCAGCCCCATGCATGAACGAGTTACAGAGTTGAGCCTAAAAAGATATCAGTTACATGGATCTTTATCTCCCCATGTTTGCAATCTCACTTTTCTGGAAACTCTCGACATTGGAGACAACAACTTCTTTGGAGAAATTCCTCAGGATTTGGGTCAGTTGCTACATTTGCAACACCTTATTCTCACCAATAATTCTTTTGTAGGTGAGATTCCTACAAACCTGACATATTGCTCCAATCTCAAGTTATTGTATTTGAATGGGAACCATCTCATTGGTAAAATACCAACTGAATTCGGCTCTTTGAAAAAGCTTCAATCAATGTTTGTTCGGAATAACAATTTAACCGGAGGAATCCCTTCATTCATTGGAAATCTTTCAAGCTTAACACGTCTGTCAGTTTCTGAAAACAATTTTGAGGGAGATATTCCACAAGAAATATGTTTCCTCAAACACTTGACATATTTAGGTTTGAGTGTCAACAATTTGTCCGGTAAGATTCCTTCTTGTCTTTATAATATCTCATCACTTATTACACTTTCGGCAACACAAAATAACTTGCATGGCTCTTTTCCACCCAACATGTTCCACACCCTCCCCAATCTTAAATTTTTACATTTTGGAGGAAATCAATTCTCTGGTCCAATTCCTATTTCGATTGCTAATGCTTCTACCCTACAAATATTAGACTTATCAGAAAACATGAATTTGGTTGGACAAGTTCCAAGTCTAGGGAATTTACAAAATCTTTCCATTCTAAGTTTGGGATTCAACAATTTAGGTAACATTTCAACTATGGATTTAGATTTTTTAAAATATTTGACAAATTGCAGTAAACTAAATGTGCTTTCGATAGCTGGAAATAATTTTGGTGGTCAACTGCCAAATTCCATAGGCAATTTTTCCACTGAACTTCAACAACTATTTATGGGGGGTAATCAGATATCAGGAAAAATTCCTGCAGAATTAGGATATCTAGTTGGCTTAATTCTCTTGACCATGGAGTCTAACTACTTTGAAGGAATTATTCCAACTACTTTTGGGAAGTTCCAAAAGATGCAGCTATTACGTTTGAGGAAAAACAAGTTGTCAGGAGATATTCCACCCTTCATAGGCAATCTCAGTCAGTTGTTTAAATTACAATTAAATCATAATATGTTTCAAGGAAGTATTCCTCCAAGCATTGGAAACTGTCTACATTTACAATATCTAGATCTTTCTCATAATAAGCTTAGAGGAACCATACCTGCAGAGGTTTTAAATCTTTTTTCTTTATCAATGTTATTGAACTTGTCACATAACTCTTTGAGCGGTACTTTACCAAGAGAAGTGGGTATGTTAAAAAATATTAAAGGATTAGATGTCTCTGGGAATCATCTATCTGGTGATATTCCGATAGAAATTGGTGAATGTACAAGCATAGAATATATTCTTTTGCAAAGGAACTCCTTCAACGGAACAATACCGTCCTCTTTGGCTTCTCTTAAAGGTCTTCAATATTTAGACTTTTCAAGAAATCAATTGTCTGGATCAATTCCTGATGGTATGCAAAATATCTCATTTTTGGAATATTTTAATGTTTCTTTTAACATGTTGGAAGGAGAGGTACCGACAAATGGTGTATTTGGAAATGCAACGCAAATAGAAGTGATTGGAAACAAAAAGCTCTGTGGAGGTATTTCCCACCTGCATCTACCACCGTGCCCTATCAAGGGTAGGAAACATGTAAAACAACACAAGTTCAGGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTATTCTCATACTTTCATTTATCATAACTATCTACATGATGAGTAAAATAAATCAAAAGAGATCTTTTGATTCACCAGCAATTGATCAACTAGCTAAGGTTTCGTACCAAGAATTACACGTAGGAACCGATGGATTCTCAGATAGAAACTTGATCGGATCAGGAAGTTTTGGTTCCGTATACAGAGGAAATATAGTTTCAGAAGATAATGTTGTTGCAGTAAAGGTCTTGAATCTGCAAAAAAAGGGTGCTCACAAGAGTTTCATTTTAGAATGTAATGCACTCAAAAACATTCGACACCGAAATTTGGTTAAGGTTTTAACATGTTGTTCTAGCACAAATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAATACATGAAAAATGGAAGCTTAGAACAATGGTTACATCCCGAGACTTTGAATGCAAATCCTCCAACAACATTGAACCTTGGTCATAGATTAAACATCATCATCGATGTTGCTTCTGCATTACATTATCTTCATCGAGAATGTGAGCAATTAGTCTTTCATTGTGATATAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACAATTTCTGGTACCTCTCATAAGAATACTAGCACAATTGGAATAAAAGGAACAGTTGGTTATGCTCCTCCGGAGTATGGGATGGGTTCAGAAGTATCCACTTGTGGTGACATGTATAGCTTTGGAATCCTTATGCTGGAAATGCTTACTGGTAGAAGACCCACTGATGAACTTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTACAATTTCATTTCCTGATAATCTTATAAAGATTTTGGATCCACATCTTTTACCAAGAGCTGAAGAATTAGGAGCAATAGAAGATGGAAATCATGAGATTCATATTCCAACTATAGAAGAGTGCTTAGTTTCACTTCTTAGGATTGCACTTTTATGTTCTTTGGAATCACCAAAAGAAAGAATGAATATTGTGGATGTCACTAGAGAGCTTACCACAATCCAGAAGGTCTTTCTAGCTGGTCTTGAACAAAATTTCTAA 3093 0.356 MKSFSLLSPTLLYLHPLFMLTLNLMWFGPNKIRALAAIGNQTDHLALLKFKESISSDPYNALESWNSSIHFCKWHGITCSPMHERVTELSLKRYQLHGSLSPHVCNLTFLETLDIGDNNFFGEIPQDLGQLLHLQHLILTNNSFVGEIPTNLTYCSNLKLLYLNGNHLIGKIPTEFGSLKKLQSMFVRNNNLTGGIPSFIGNLSSLTRLSVSENNFEGDIPQEICFLKHLTYLGLSVNNLSGKIPSCLYNISSLITLSATQNNLHGSFPPNMFHTLPNLKFLHFGGNQFSGPIPISIANASTLQILDLSENMNLVGQVPSLGNLQNLSILSLGFNNLGNISTMDLDFLKYLTNCSKLNVLSIAGNNFGGQLPNSIGNFSTELQQLFMGGNQISGKIPAELGYLVGLILLTMESNYFEGIIPTTFGKFQKMQLLRLRKNKLSGDIPPFIGNLSQLFKLQLNHNMFQGSIPPSIGNCLHLQYLDLSHNKLRGTIPAEVLNLFSLSMLLNLSHNSLSGTLPREVGMLKNIKGLDVSGNHLSGDIPIEIGECTSIEYILLQRNSFNGTIPSSLASLKGLQYLDFSRNQLSGSIPDGMQNISFLEYFNVSFNMLEGEVPTNGVFGNATQIEVIGNKKLCGGISHLHLPPCPIKGRKHVKQHKFRLIAVIVSVVSFILILSFIITIYMMSKINQKRSFDSPAIDQLAKVSYQELHVGTDGFSDRNLIGSGSFGSVYRGNIVSEDNVVAVKVLNLQKKGAHKSFILECNALKNIRHRNLVKVLTCCSSTNYKGQEFKALVFEYMKNGSLEQWLHPETLNANPPTTLNLGHRLNIIIDVASALHYLHRECEQLVFHCDIKPSNVLLDDDMVAHVSDFGIARLVSTISGTSHKNTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDELFEDGQNLHNFVTISFPDNLIKILDPHLLPRAEELGAIEDGNHEIHIPTIEECLVSLLRIALLCSLESPKERMNIVDVTRELTTIQKVFLAGLEQNF* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0990 1030 SUPERFAMILY L domain-like 41 337 - -
Mtr6g0990 1030 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Mtr6g0990 1030 PANTHER LRR RECEPTOR-LIKE KINASE 28 1024 - -
Mtr6g0990 1030 SMART serkin_6 715 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0990 1030 SMART LRR_typ_2 203 227 IPR003591 -
Mtr6g0990 1030 SMART LRR_typ_2 324 347 IPR003591 -
Mtr6g0990 1030 SMART LRR_typ_2 477 499 IPR003591 -
Mtr6g0990 1030 SMART LRR_typ_2 107 131 IPR003591 -
Mtr6g0990 1030 SMART LRR_typ_2 403 426 IPR003591 -
Mtr6g0990 1030 SMART LRR_typ_2 572 595 IPR003591 -
Mtr6g0990 1030 SMART LRR_typ_2 524 548 IPR003591 -
Mtr6g0990 1030 SMART LRR_typ_2 451 475 IPR003591 -
Mtr6g0990 1030 Pfam Leucine rich repeat 181 240 IPR001611 GO:0005515
Mtr6g0990 1030 PRINTS Leucine-rich repeat signature 478 491 - -
Mtr6g0990 1030 PRINTS Leucine-rich repeat signature 572 585 - -
Mtr6g0990 1030 Gene3D Phosphorylase Kinase; domain 1 696 796 - -
Mtr6g0990 1030 SUPERFAMILY Protein kinase-like (PK-like) 695 1015 IPR011009 -
Mtr6g0990 1030 PANTHER OS04G0122200 PROTEIN 28 1024 - -
Mtr6g0990 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Mtr6g0990 1030 Gene3D Ribonuclease Inhibitor 265 346 IPR032675 -
Mtr6g0990 1030 ProSiteProfiles Protein kinase domain profile. 715 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0990 1030 Pfam Leucine Rich Repeat 157 179 IPR001611 GO:0005515
Mtr6g0990 1030 Pfam Leucine Rich repeat 475 490 IPR001611 GO:0005515
Mtr6g0990 1030 Gene3D Transferase(Phosphotransferase) domain 1 797 1024 - -
Mtr6g0990 1030 SUPERFAMILY L domain-like 381 635 - -
Mtr6g0990 1030 Gene3D Ribonuclease Inhibitor 38 264 IPR032675 -
Mtr6g0990 1030 Pfam Protein kinase domain 717 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0990 1030 Gene3D Ribonuclease Inhibitor 347 646 IPR032675 -
Mtr6g0990 1030 ProSiteProfiles Leucine-rich repeat profile. 477 498 IPR001611 GO:0005515
Mtr6g0990 1030 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0990 Mtr-Chr6 13343415 13346945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0990 40 1022 Receptor kinase-like Gene Family AT3G47570 45.171 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr6g0990 Pkinase 2.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0990 - - mtr:MTR_6g036870 1542.71