Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0982 ATGCTAGGGGACTCAGCAGTGTTGGGAACAGGAGGAGGAAGCTCAGGAGATGGAGCAGGAGCTTACCATGATGGTGGTGGTGGATCAATTTCAGGTGATGATGAAAGAGGGGGTGGAAGTAGTAGAAATGAAGAGGGTGTGGATAGAAGTTTTGGTGGTAATAGATGGCCAAGACAAGAAACACTTGCTTTGTTGAAGATAAGGTCTGATATGGATGGTGCTTTTAAAGATGCAAGTGTTAAAGGTCCCTTATGGGATGAAGTTTCAAGGAAAATGGCAGATCTTGGATATCAAAGAAACTCCAAAAAATGCAAAGAAAAGTTTGAGAATGTTTACAAATATCACAAGAGAACCAAAGAAGGAAGAGGTGGTAAATCAGATGGTAAAACTTATAGATTCTTTGATCAATTACAAGCCCTTGAAAACAACCCTTCAATGCATCAATCACCTTCAATAACACCACCACCCATTAGTACTATTCCCACCCCTACAACAACACCTTCATTTCTATCTGCACCTCCTACCACCACTGTTCCATCAACCACAATTCCAATGTCTTACACACAATCCAACCCTACACATTTTCCACCAATACCATCATCAACAAACCCTATAAATACTAATAACCCTATTCCTCAAATTACTACAACACCCCCACCATCATCATTCCCCAACATTTCAACAGATTTCTTCTCGAATTCAAGTTCGTCTTCAACTTCTTCTGAGGAAACGACGACAATGGAAGGGGGATCGAATCGGCGGAAGAGGAAGAGGAAATGGAAGGATTTCTTTGAGAGACTAATGAAGGAGGTTGTTGAGAAACAAGAGGAGTTACATAAGAGATTCTTGGAAGCTATAGAGAAAAGAGAAAGAGAGAGAGGTGCAAGAGAAGAAGCTTGGAGGTTGCAAGAGATGCAAAGGATTAATAGAGAAAGGGAAATTCTTGCTCAAGAGAGATCTCTTGCTGCTACTAAAGATGCTGCTGTTATGGCTTTTTTGCAGAAGATTGCTGAACAACAAGAACAACAAAATCTTGTTCCTCCTGTATTGAACAACAGCACCATTGTTCCTCAGCAGCAACAAGCGCCGCAAGAAACTATACCAACCCCAACACCGAAACCGACACCAACACCAACACCAACACCAGTACCGTTGCCAGCAGCAGCAGCACCATTGCCAATACCGATACCAGCAATACCTACACCGCAGCAAGTTCAAAATCCAACTGTAACAGTGCAACAACAAACATCAGTCATTCCTCAGGCTTCACCGTTGCCACAACATCAGCAGCAGCAACAGCAGGTTCAGGTACAACAGCAGCAAGTGATGAATATGGAAGTTGCGAAAAGTGATAACAATGGTGAGAGTATGATGCATGCAAGTTCTTCTAGGTGGCCAAAAACTGAGGTTGAGGCATTGATAAAGCTGAGAACAACTCTTGATATGAAGTACCAAGAGAATGGACCTAAAGGGCCATTATGGGAGGAGATTTCAGGGTTGATGAAGAAAATGGGGTACAATAGGAATGCAAAGAGGTGCAAAGAGAAATGGGAAAACATTAACAAGTATTTCAAGAAAGTGAAGGAAAGCAACAAGAAGAGGCCAGAAGATTCAAAGACATGTCCTTACTTTCACCAACTTGATGCTCTATACAGGCAGAAGAACAAGGTGGAGGGTGCAGCTGCTGCTGCGTCGAGGCCTGAGGGAACGATGATGGCACCGTTGATGGTTCAGCCGGAGCAGCAGTGGCCTCCACAGCAACAGGTGCCACCAGCAGCCGGGGCGGATGTGACCATGGAGGAAGCTGAGACTGAGAATGATCGGCCGCATCGAGATGAAGAAGAATATTATGACGATGATGACGGTGATGATGACGAGGACGAAGACGAAGGTATTGACAATTATGAAGTGGTTGCCAACAAACCACCGCCACCTCAATGA 1941 0.44 MLGDSAVLGTGGGSSGDGAGAYHDGGGGSISGDDERGGGSSRNEEGVDRSFGGNRWPRQETLALLKIRSDMDGAFKDASVKGPLWDEVSRKMADLGYQRNSKKCKEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQALENNPSMHQSPSITPPPISTIPTPTTTPSFLSAPPTTTVPSTTIPMSYTQSNPTHFPPIPSSTNPINTNNPIPQITTTPPPSSFPNISTDFFSNSSSSSTSSEETTTMEGGSNRRKRKRKWKDFFERLMKEVVEKQEELHKRFLEAIEKRERERGAREEAWRLQEMQRINREREILAQERSLAATKDAAVMAFLQKIAEQQEQQNLVPPVLNNSTIVPQQQQAPQETIPTPTPKPTPTPTPTPVPLPAAAAPLPIPIPAIPTPQQVQNPTVTVQQQTSVIPQASPLPQHQQQQQQVQVQQQQVMNMEVAKSDNNGESMMHASSSRWPKTEVEALIKLRTTLDMKYQENGPKGPLWEEISGLMKKMGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRQKNKVEGAAAAASRPEGTMMAPLMVQPEQQWPPQQQVPPAAGADVTMEEAETENDRPHRDEEEYYDDDDGDDDEDEDEGIDNYEVVANKPPPPQ* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0982 646 MobiDBLite consensus disorder prediction 580 646 - -
Mtr6g0982 646 MobiDBLite consensus disorder prediction 37 51 - -
Mtr6g0982 646 CDD GT1 463 528 - -
Mtr6g0982 646 MobiDBLite consensus disorder prediction 1 55 - -
Mtr6g0982 646 MobiDBLite consensus disorder prediction 357 380 - -
Mtr6g0982 646 MobiDBLite consensus disorder prediction 601 615 - -
Mtr6g0982 646 MobiDBLite consensus disorder prediction 228 257 - -
Mtr6g0982 646 Coils Coil 272 292 - -
Mtr6g0982 646 CDD GT1 54 119 - -
Mtr6g0982 646 MobiDBLite consensus disorder prediction 228 247 - -
Mtr6g0982 646 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 19 639 - -
Mtr6g0982 646 PANTHER - 19 639 - -
Mtr6g0982 646 SMART sant 461 523 IPR001005 -
Mtr6g0982 646 SMART sant 52 114 IPR001005 -
Mtr6g0982 646 ProSiteProfiles Myb-like domain profile. 457 521 IPR001005 -
Mtr6g0982 646 Pfam Myb/SANT-like DNA-binding domain 463 550 IPR044822 -
Mtr6g0982 646 Pfam Myb/SANT-like DNA-binding domain 54 140 IPR044822 -
Mtr6g0982 646 Gene3D - 56 117 - -
Mtr6g0982 646 Gene3D - 465 526 - -
Mtr6g0982 646 MobiDBLite consensus disorder prediction 616 633 - -
Mtr6g0982 646 ProSiteProfiles Myb-like domain profile. 54 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0982 Mtr-Chr6 13125509 13129078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0982 442 583 Trihelix Transcription Factor Family AT1G76880 65.584 2.07e-60 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr6g0982 Myb_DNA-bind_4 7e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0982 - - gmx:547624 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0982 6 13125509 13129078 Mtr1g3652 1 48196771 48200272 PCT