Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0980 ATGGAAGGGAATTTATCACAAGGAGGTATAGTTCAAGGTGGTGGTGGTTCTTTTGGTGGTTTTGATTTGCCGGGATCGATGCGGGTTCATCGTCAAGGGCAACATCCACATACAATGAACCAACATCAAGCTCATCCATGTCAAGGGCCGGCGGTGCATTCTTCGATTAATGAAGGTTTTCCTCTTACAATGGGGACGTTGAAGAACTGTGATCAGACGATGTCGATGAACGAGTTTAGTCAGGGAGATAGAAACAAACACTCGGGAAGTGAGGAAGATGAGCCGGAGGAAGGTGGTGATGGTCATCATCAAGAAGGAAGTAGAGGGAAAAAGGGGTCGCCGTGGCAGCGTGTCAAGTGGACTGATAAGATGGTGAGGCTTTTGATAACGGCGGTCTCTTATATTGGCGAGGACGGGAGTTCTGAAGGTGGTAGTGGTGGAAGGAGAAAATTTGCAGTGTTGCAGAAAAAGGGTAAGTGGAAATCTATATCTAAGGTTATGGCTGAAAGAGGTTATCGTGTTTCGCCTCAGCAATGTGAGGATAAGTTCAATGATCTTAATAAAAGATATAAACGGCTTAACGATATGCTTGGAAGAGGAACTTCCTGTCAAGTTGTTGAAAATCCGGCTTTGTTGGATGTAATCGAATATCTTAACGAGAAAGAAAAGGATGATGTTAGAAAAATATTGAACTCGAAACATCTCTTCTATGAAGAAATGTGTTCTTACCATAATTGTAATAGATTGCATTTGCCGCACGATCCTGCATTGCAGCGGTCCTTGCAAATAGCTCTCCGAAATAGAGATGATCATGATAACGACGATGTGAGAAGGTCCTATCATGATGATCATGACGAGGACGATCATGATATGGAAACGGACGATCATGATGAGTTCGAAGAGAACTACGCTTCCCATGGTGACAGTCGAGTAATCTTTGGGGGATTGGGGGGAACTCCGAAAAGACTAAGACAAGGCCAAGGCCATGAAGATGCCACTACTTTTGGGAATTCTTTCAATTGTCAGGATTACCATAAAAGTCCGTATCCTCATGGACAGATGGTTCAACCGGATGGAAATCATGCTTTACCGGAAAACATGAAAGCAGCTTGGTTACAGAAGCAATGGATTGAATCTCGCTCGGTTCAGTTAGAAGAACAGAAGTTACAGATTCAGGTTGAGATGATGGAACTAGAGAAACAAAAATTCAAGTGGGAGAGGTTTAGCAAGAAAAAAGACCGAGAGTTGGAGAAGTTCAAGCTGGAAAATGACAGAATGAAGATTGAGAATGAACGTATTGCTTTAGAACTAAAGCGAAAGGAGATTGGTGGCACCAGCTTTAACTAG 1347 0.4306 MEGNLSQGGIVQGGGGSFGGFDLPGSMRVHRQGQHPHTMNQHQAHPCQGPAVHSSINEGFPLTMGTLKNCDQTMSMNEFSQGDRNKHSGSEEDEPEEGGDGHHQEGSRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGSSEGGSGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVIEYLNEKEKDDVRKILNSKHLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRRSYHDDHDEDDHDMETDDHDEFEENYASHGDSRVIFGGLGGTPKRLRQGQGHEDATTFGNSFNCQDYHKSPYPHGQMVQPDGNHALPENMKAAWLQKQWIESRSVQLEEQKLQIQVEMMELEKQKFKWERFSKKKDRELEKFKLENDRMKIENERIALELKRKEIGGTSFN* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0980 448 PANTHER FACTOR, PUTATIVE-RELATED 1 443 - -
Mtr6g0980 448 MobiDBLite consensus disorder prediction 271 286 - -
Mtr6g0980 448 MobiDBLite consensus disorder prediction 77 116 - -
Mtr6g0980 448 Coils Coil 409 438 - -
Mtr6g0980 448 MobiDBLite consensus disorder prediction 1 23 - -
Mtr6g0980 448 MobiDBLite consensus disorder prediction 33 50 - -
Mtr6g0980 448 PANTHER F16F4.11 PROTEIN-RELATED 1 443 - -
Mtr6g0980 448 MobiDBLite consensus disorder prediction 84 116 - -
Mtr6g0980 448 Coils Coil 381 401 - -
Mtr6g0980 448 MobiDBLite consensus disorder prediction 271 297 - -
Mtr6g0980 448 Gene3D - 120 192 - -
Mtr6g0980 448 MobiDBLite consensus disorder prediction 31 50 - -
Mtr6g0980 448 Pfam Myb/SANT-like DNA-binding domain 117 243 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0980 Mtr-Chr6 13081683 13084707 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr6g0980 Myb_DNA-bind_4 1.5e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0980 - - mtr:MTR_6g035315 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0980 6 13081683 13084707 Mtr1g3653 1 48219433 48223888 PCT