Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0966 ATGGCATCACTAAACCAACAAGCCAAATATGATCTTGAGCAAAATTCAACAACCCTAGAAGTTGAAACAAAAGATTTTGACTACTCAAAAAGATCACAATGGCTAAGAGCAGCTGTTTTAGGCGCTAACGATGGATTAGTCTCTACAGCTTCGCTAATGATGGGTGTCGGTGCAGTCAAGCAAGACATCAAAGCAATGATCTTAACCGGTTTTGCCGGGTTGGTAGCCGGTGCATGCAGCATGGCAATAGGTGAATTTGTCTCTGTGTACTCACAATTAGACATTGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAGAGGAAGAGAAATCAATGATGATGAAGAGAAAGAAAGTTTACCTAATCCTCTACAAGCTGCAGCTGCATCAGCTTTAGCTTTTTCTATTGGTGCAATGGTGCCATTACTTGCAGCTTTTTTTATAAGGGATTATAAGGTGAGAGTTGGTGTTGTTGTAGCTGCAGTTAGTTTTGCTTTGCTTGTTTTTGGTTGGTTAGGAGCTGTGTTGGGTAAGGCTCCAATTTTTAGGTCTGTTTTGAGGGTTTTGTTTGGTGGTTGGATGGCTATGTCCATTACTTTTGGGCTTACTAAGTTGATTGGGACAAGTGGACTTTAG 633 0.406 MASLNQQAKYDLEQNSTTLEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGREINDDEEKESLPNPLQAAAASALAFSIGAMVPLLAAFFIRDYKVRVGVVVAAVSFALLVFGWLGAVLGKAPIFRSVLRVLFGGWMAMSITFGLTKLIGTSGL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0966 210 CDD Nodulin-21 33 179 - -
Mtr6g0966 210 Coils Coil 97 117 - -
Mtr6g0966 210 Pfam VIT family 116 202 IPR008217 GO:0005384|GO:0030026
Mtr6g0966 210 Pfam VIT family 35 115 IPR008217 GO:0005384|GO:0030026
Mtr6g0966 210 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 207 IPR008217 GO:0005384|GO:0030026
Mtr6g0966 210 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 15 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0966 Mtr-Chr6 12776091 12777223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0966 1 210 Nodulin-like Gene Family AT3G43660 67.619 2.67e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0966 K22736 - gmx:100815165 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0966 6 12776091 12777223 Mtr1g3660 1 48279305 48280291 PCT