Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0963 ATGGAACAAAACAACTTCACAAGAAAACCACCACCAGTCATAATTGACTTAGAAACCATGCCACCATCACGTGGGACCCACCACCGCCGTTCACACTCAGACACCACCTTCCGTTTCGCAGCAAACTTCGACGATCTTCTCACCTTTGACCCTTCCGACTTCGATATCTCCAACCTCCCTCTTCTGTCCCCTGACGCTGTCCCGATGGACTCTGATGAGTCCATCGGGAAGTCAGCGTCAGAGGGACGGCATCTTAGGAGTTTATCTGTGGATTCTGAGTTTTTTGATGGGTTAGGGTTTGGTGGTGAAGGGGAAAAGGTTGAAGAGAGGAAGGTGAGTAGACATAGGTATAGTAGTTCGATGGATGGGTCTGAGATGGGGTTGTTTGAGGTTGGTGATGGTGTGAAGAAATCTATGCCAGCTGAGAAACTTGCTGAACTTGCTCTTATTGATCCTAAGAGAGCTAAAAGGATTCTTGCTAATAGGCAATCCGCTGCACGATCAAAAGAGAGGAAAACTCGATATACAAGTGAGCTGGAGAGGAAAGTGCAAACACTTCAAACTGAAGCAACTAACCTCTCTGCGCAACTTACAACCCTTCAGAGAGACACTACTGATTTGACTGCTCAGAATAAGGAGCTCAAAATGAAGTTAGATGCCTTCGAGCAACAAGCACAGCTTAGAGAAGATCTAAATGAAGCATTGAAGAAAGAACTTCAACGCCTTAGGGCACAAAAGAATCATTTGACTGCCGTAGCCGGTAATCCTTCATTCAACGGGATGTTCTCGCAATTTGCTACACAATTAACCATGCAACAGATGAGTAATCCTCAACCCCAGCAGACACAACCTGGCATGCCGCCTTCTCGTTCTGATCAACCCTTCAACGGTCGTGGCCGCTCTAACTTCATGGACTTCAATTACCAAAAGTAG 933 0.463 MEQNNFTRKPPPVIIDLETMPPSRGTHHRRSHSDTTFRFAANFDDLLTFDPSDFDISNLPLLSPDAVPMDSDESIGKSASEGRHLRSLSVDSEFFDGLGFGGEGEKVEERKVSRHRYSSSMDGSEMGLFEVGDGVKKSMPAEKLAELALIDPKRAKRILANRQSAARSKERKTRYTSELERKVQTLQTEATNLSAQLTTLQRDTTDLTAQNKELKMKLDAFEQQAQLREDLNEALKKELQRLRAQKNHLTAVAGNPSFNGMFSQFATQLTMQQMSNPQPQQTQPGMPPSRSDQPFNGRGRSNFMDFNYQK* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0963 310 SMART brlzneu 149 213 IPR004827 GO:0003700|GO:0006355
Mtr6g0963 310 Pfam bZIP transcription factor 153 211 IPR004827 GO:0003700|GO:0006355
Mtr6g0963 310 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 12 302 - -
Mtr6g0963 310 SUPERFAMILY Leucine zipper domain 153 205 IPR046347 GO:0003700|GO:0006355
Mtr6g0963 310 MobiDBLite consensus disorder prediction 272 310 - -
Mtr6g0963 310 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 12 302 - -
Mtr6g0963 310 Gene3D - 152 205 - -
Mtr6g0963 310 CDD bZIP_plant_RF2 154 203 IPR044759 GO:0003700|GO:0006355
Mtr6g0963 310 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 151 214 IPR004827 GO:0003700|GO:0006355
Mtr6g0963 310 Coils Coil 176 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0963 Mtr-Chr6 12728373 12733863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0963 13 287 bZIP Transcription Factor Family AT1G43700 45.260 1.02e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr6g0963 bZIP_1 6.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0963 K20557 - gmx:778142 348.977