Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0943 ATGTTTCAATTTTTTGAGCAAAGTTTTCACTCTAAAGATATGATTATGTTGCAGATTTTTTTTTACCACAAAAGAGAAGGTAAAGATAAAATGCAAGATATTTGGAACGTGATTTGTGGCGATGATGATTCAGCTTGTTCTTTACTTCAAGGAAAACCTTTCTGTTTCGATTTCGAGGTTCTGATGAATCCTTCTTCATGCATCAACCATTTGTTGATCATTTTTCTTAATCTGTTGTTGCTAATAATGTTGACATTTGTTATGATTCAAAAGTCTTTGGCGAGGTCAATTCAGGATCAGACTAGAGTGGAAAGGTATTCAAAGTTGCAGCTAGTTTCTGCAATAACCAATGGCTCTCTTGGTTTGTTGCATTTTTTCTTAGGCATTTGGATTTTAGAGGAGAAGTTAAGGAAAAACCTCACTGTTTTTCCTCATACTTGGTGGCCACTACAACTTCTTCACGGATTTACATGGATCTTAGTTGCTTTAACTATAAGTCTTCTGCCGAAACAACTTCCAAGAACATGCTTGAGACTGTTTACTATGCTTATATTTTTTGTTTCTGGTATTTTATGTGCTTTGTCCTTATCTTTTGCACTTAGCAGCAAGGAACTGTCCCTTAAGATAGCTTTAGATGTTCTATCTTTTTTGGGAGTACTTTTACTGCTCTTCTGCACATACAAAGTATGTAAAGATGAAGATACTGACAAGGAAGTAGATGGAAGTCTATATGCCCCTTTGAATAGCCGGGTCCTTGATGTTGATCCTGTTCGACATATAAGTCTAACCCCATTTGCCAAAGCTGGACTCCTTAGTCGGATGTCATTTTGGTGGTTGAATCCACTGATGAAAAAGGGTCAAAAGAAAACACTCGAGGGCAAAGACATCCCAAAGTTGCAAGAGTCGGATAGAGCAGAAGTATGTTATTCGTTATTTATAGAACAATTGAATAGAAAAAAGCAGAAGGATCCATCATCTCGATCATCGGTGTTATGGACAATTGTTTTTTGCCACCGGAGAGAGATTTTGATATCTGGATTCTTTGCATTTCTCAAGGTACTCACTCTTTCTTCTTGTCCTATAATATTGAATGCCTTTATACTGGTGGCTGAGGGTAATCAAAGTTTCAAATTTGAAGGTTACTTTTTGGCAATCTCACTTTTGTTTATCAAGATTTTAGAGTCCCTATCTCAAAGGCAATGGTATTTTCGCTCAAGGGTTATTGGTATGAAAGTTAGGTCATTACTTATTGCATCAATTTATAAGAAACAATTGAAATTATCCAATGCTGCTAGATTGATTCACTCTAGCGGTGAGATAATGAACTATGTGAACGTGGATGCCTATAGAATCGGAGAATTTCCGTTTTGGTTTCACCAGACATGGACAACAGTCCTCCAACTATCAATTGCATTAGTAATTCTTTTTCGCGCTATTGGATTGGCAACAATTGCATCGTTGGTGGTGATATTTTTGACCGTGCTTTTGAATGCTCCACTAGCAAAGTTACAACATAAGTATCTAAGTAAACTTCTGGTGGCCCAAGATGAAAGGTTGAAAGCTAGTTCTGAGGCTCTGGTGAACATGAAAGTGCTAAAGTTATATGCATGGGAAATGCATTTTAAAAATTCCATTGAAATCCTAAGAATTGTTGAAGAAAAATTGTTATCTTCAGTGCTATTACAAAAGGCATACAGCCTTATGCTCTTTTGGTTTTCACCTACTTTGGTCTCTGCTGCTACCTTTTTGGCTTGTTACCTCTTGAAAGTTCCTCTCCATGCAAATAATGTTTTCACATTTATCACAACCGTGCGCCTTGTGCAAGATCCTATTTCAACCATTGGAGATGTTATTGGAGTGATCATTCAAGCAAAGGTTGCTTTTTCTCGGGTTGTGAAATTTCTCGAGGCACCTGAGCTTCAAACTACTAGTGTCAGAAAGAGCTACAATGATGAGAAGTTAAAGGGTTCAATTTTAATTAAGTCTGCAGATTTTTCATGGGAGTATAATATATTGATGGCAACAATACGAAACATTAATTTAACGGTTAGAGCAGGGCAAAAAATAGCTATTTGTGGAGAAGTTGGCTCAGGAAAATCAACTTTATTAGCAGCAATTCTCGGAGAAGTACCAAATACTAAGGGGAAAATTGAAGTTTATGGAAAGTTTGCTTATGTTTCTCAAACAGCTTGGATTCAAACTGGAACAATACAGGAAAATGTTTTGTTTGGATCACCTTTGGATACTCAAAGGTATGAAGAATCACTTCATAGGTCTTCACTGATGAAGGACCTTGAGTTGTTTCCGTATGGTGATCTAACCGAGATAGGAGAGAGAGGTGTTAATCTAAGTGGGGGTCAAAAGCAGAGAATTCAACTTGCTCGAGCTCTTTATCAAAATGCTGATGTATATCTCTTGGATGATCCTTTCAGTGCTGTTGATGCGCACACTGCAAAAAATTTGTTCAATGAATACATATTGGAAGGACTCTCTGAAAAGACAGTCGTTTTTGTGACTCATCAAGTTGACTTTCTCCCGTCATTTGATTCTATTTTGTTGATGTCAGGTGGGAAAATCCAACAAGCTTCTACATATCATGATCTACTAATCTTTAGCCAAGAATTTAAGGACCTTGTTAATGCACACAAAAATATTGGCAACCCTAATCATCTTTTAGACGTTACTTCAACCCCAATACATTCAAAGTCTAGTCGAGAGATTAAACAATATTCCATAGAGAAGTCGTCTAATGCTAAATATGGTGATCAATTCATTGAGCAAGAAGAGAGAGAAAAAGGAGACGCAGGGTGGAAGCCTTACTTACAGTATCTGAATCAGAAAAGCGGCTACATATACTTCTTCGTCGGTTCTCTTTCTTATGTGATATTTGTGATCTGCCAGATATCGCAAAACTCATGGATGGCTGCTAATGTTGACGATCCTCAAGTCAGCACATTGCAATTGATTACAGTTTACTTGTTGATTGGAGTTAGTTCTACGGTTTTCATTATAATCAGAGCTCTACCTGCAGCTGCTTTGGGAATTCAATCATCAAAGGTTTTATTTAGACAGTTAATGAATTCTCTTTTTCATGCACCAATGTCTTTCTATGACACCACACCCTTGGGAAGGATACTTAGTAGGGTATCATTAGATCTGAGCATTGTGGATCTTGATATCTCTTTTAACCTCTCATATTATATAGCATCCAATATAACTTACTATTCAGGTCTAATAGTCTTAACATCGGTCGCTTGGCAAGTCTTGTTTGTGTGTATACCAATGGCTTATGTTATTATTCGTTTACAGAGACACTACTATGCATGTGCAAAAGAACTTATGCGGATGAATGGCACGACTAAATCCGCTGTAGCTAATCATGTAGCTGAAACTACTGCTGGAGCAATGACAATAAGGGCTTTTGAGGAAGAAGACCGTTTTTTCAACAAGAATCTTGATTTAATTGATGTCAATGCTAGTGCTTTCTTCCACAGTTTTTCCTCAAATGAGTGGTTGATCCAACGAGTAGAAACAGCGTATGCAATTGTTCTTGCCTCTGCAGCATTTTCTATTGCTATGCTTCCATTAGACACTTTATCATCTGGTTTTATTGGTATGGCCCTTTCTTATGGCTTTTCATTAAACAGTGCCTTAGTATATACCATTCAATACCAATGCATTCTCGAAAATTATATAGTATCAGTAGAAAGGATAAATCAATACTCTCATATACCAAGTGAGGCCCAAGAAGTGAGTGAAGGAAATCATCCTCCAATCAATTGGCCAGATGTTGGAAAAGTTGAAATAAAAGACTTGAAGATACAATATAGGCCTAATGCACCTCTTGTACTACATGGTATCAATTGCATCTTTGAAGGAGGGCACAAGATTGGTATTGTCGGTAGAACTGGCAGCGGAAAATCTACACTGATAGGTGCTTTGTTTCGTCTTGTGGAGCCCGTGGGAGGCAAAATTATAGTCGATGGAATAGACATATCATCTATTGGCCTTCATGACTTGAGGACAAGTTTTGGCATAATACCTCAGGATCCTACGCTTTTCTTTGGGACAGTTAGATATAACATGGATCCTTTATCTCAACATTCTGATCAAGAAATATGGGAGGTTCTTCGAAAGTGTCAGTTACGAGAATCTGTCAAAGATAAAGGTGGCTTAGATTCCTCAGTTGTCGAAGATGGATCAAACTGGAGCATTGGACAAAGGCAACTATTCTGTTTAGGGCGCGCTCTTTTGAGGAGAAATAGGATATTGGTGTTGGATGAAGCAACTGCATCAATCGATAATGCGACTGATTTAATTCTTCAAAATACCATTAGAAAAGAGTTTGCAGATTGTACAGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCAATATGGTTCTTTCCATAAGTGACGGAAAGTTGGCTGAGTATGATGAGCCAATGAAGTTAATGAAGAAAGAAAAATCATTATTTGGACAACTTGTAAAGGAATATTGGTCTCATTTTCAGTAG 4524 0.3747 MFQFFEQSFHSKDMIMLQIFFYHKREGKDKMQDIWNVICGDDDSACSLLQGKPFCFDFEVLMNPSSCINHLLIIFLNLLLLIMLTFVMIQKSLARSIQDQTRVERYSKLQLVSAITNGSLGLLHFFLGIWILEEKLRKNLTVFPHTWWPLQLLHGFTWILVALTISLLPKQLPRTCLRLFTMLIFFVSGILCALSLSFALSSKELSLKIALDVLSFLGVLLLLFCTYKVCKDEDTDKEVDGSLYAPLNSRVLDVDPVRHISLTPFAKAGLLSRMSFWWLNPLMKKGQKKTLEGKDIPKLQESDRAEVCYSLFIEQLNRKKQKDPSSRSSVLWTIVFCHRREILISGFFAFLKVLTLSSCPIILNAFILVAEGNQSFKFEGYFLAISLLFIKILESLSQRQWYFRSRVIGMKVRSLLIASIYKKQLKLSNAARLIHSSGEIMNYVNVDAYRIGEFPFWFHQTWTTVLQLSIALVILFRAIGLATIASLVVIFLTVLLNAPLAKLQHKYLSKLLVAQDERLKASSEALVNMKVLKLYAWEMHFKNSIEILRIVEEKLLSSVLLQKAYSLMLFWFSPTLVSAATFLACYLLKVPLHANNVFTFITTVRLVQDPISTIGDVIGVIIQAKVAFSRVVKFLEAPELQTTSVRKSYNDEKLKGSILIKSADFSWEYNILMATIRNINLTVRAGQKIAICGEVGSGKSTLLAAILGEVPNTKGKIEVYGKFAYVSQTAWIQTGTIQENVLFGSPLDTQRYEESLHRSSLMKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTAKNLFNEYILEGLSEKTVVFVTHQVDFLPSFDSILLMSGGKIQQASTYHDLLIFSQEFKDLVNAHKNIGNPNHLLDVTSTPIHSKSSREIKQYSIEKSSNAKYGDQFIEQEEREKGDAGWKPYLQYLNQKSGYIYFFVGSLSYVIFVICQISQNSWMAANVDDPQVSTLQLITVYLLIGVSSTVFIIIRALPAAALGIQSSKVLFRQLMNSLFHAPMSFYDTTPLGRILSRVSLDLSIVDLDISFNLSYYIASNITYYSGLIVLTSVAWQVLFVCIPMAYVIIRLQRHYYACAKELMRMNGTTKSAVANHVAETTAGAMTIRAFEEEDRFFNKNLDLIDVNASAFFHSFSSNEWLIQRVETAYAIVLASAAFSIAMLPLDTLSSGFIGMALSYGFSLNSALVYTIQYQCILENYIVSVERINQYSHIPSEAQEVSEGNHPPINWPDVGKVEIKDLKIQYRPNAPLVLHGINCIFEGGHKIGIVGRTGSGKSTLIGALFRLVEPVGGKIIVDGIDISSIGLHDLRTSFGIIPQDPTLFFGTVRYNMDPLSQHSDQEIWEVLRKCQLRESVKDKGGLDSSVVEDGSNWSIGQRQLFCLGRALLRRNRILVLDEATASIDNATDLILQNTIRKEFADCTVITVAHRIPTVMDCNMVLSISDGKLAEYDEPMKLMKKEKSLFGQLVKEYWSHFQ* 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0943 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 660 881 IPR003439 GO:0005524
Mtr6g0943 1507 Pfam ABC transporter transmembrane region 342 608 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0943 1507 Pfam ABC transporter transmembrane region 971 1192 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0943 1507 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 102 1507 - -
Mtr6g0943 1507 CDD ABCC_MRP_domain1 658 858 - -
Mtr6g0943 1507 Pfam ABC transporter 677 810 IPR003439 GO:0005524
Mtr6g0943 1507 Pfam ABC transporter 1284 1431 IPR003439 GO:0005524
Mtr6g0943 1507 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 102 1507 - -
Mtr6g0943 1507 SUPERFAMILY ABC transporter transmembrane region 940 1247 IPR036640 GO:0005524|GO:0016021
Mtr6g0943 1507 ProSitePatterns ABC transporters family signature. 783 797 IPR017871 GO:0005524
Mtr6g0943 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1267 1500 IPR003439 GO:0005524
Mtr6g0943 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1257 1497 IPR027417 -
Mtr6g0943 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 343 623 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0943 1507 CDD ABC_6TM_ABCC_D2 953 1242 IPR044726 GO:0140359
Mtr6g0943 1507 Gene3D ABC transporter type 1, transmembrane domain 916 1249 IPR036640 GO:0005524|GO:0016021
Mtr6g0943 1507 Gene3D ABC transporter type 1, transmembrane domain 313 640 IPR036640 GO:0005524|GO:0016021
Mtr6g0943 1507 CDD ABC_6TM_ABCC_D1 344 631 IPR044746 GO:0140359
Mtr6g0943 1507 SUPERFAMILY ABC transporter transmembrane region 331 636 IPR036640 GO:0005524|GO:0016021
Mtr6g0943 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 653 881 IPR027417 -
Mtr6g0943 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 954 1230 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0943 1507 CDD ABCC_MRP_domain2 1265 1484 - -
Mtr6g0943 1507 SMART AAA_5 685 858 IPR003593 -
Mtr6g0943 1507 SMART AAA_5 1293 1484 IPR003593 -
Mtr6g0943 1507 Gene3D - 653 887 IPR027417 -
Mtr6g0943 1507 Gene3D - 1250 1501 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0943 Mtr-Chr6 12305925 12311213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0943 652 869 Calmodulin-binding Proteins AT2G36910 30.603 3.76e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0943 K05666 - gmx:100787314 2050.79