Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0941 ATGGAGGATTATTGGAGCATTATTTGTTCCGAGAATGGAGGAAATCTTTTCGGTTATGATTTCAAGTTATTGACCGATCCCTCCTCGTGCATTAATCATTTTTTGCTCATTTTCTTTGATTTCTTAATGGTGATAATGTTAACAATCATCATGTTCCAAAATTCTTCCTCGAGACCCTTTTGGAGTCTAGTAAGATATTCAAACTTGCAGCTAGTTTCTTCCATAACCAACGGCTCTCTTGGTTTCTTGCATTTATGCTTAGGAATTAGGGACTTAGAACAAAAGATAAGGAAAAACCACAATGCCTTTCCTATTAATTGGTGGTTACTCGAACTCTTTCACGGTTCAACATGGTTGTTTGTAAGTTTAACTATAAGTCTTCGGATAAAACAACTTCCACGAGCATGGTTGTTACTGTTTTCTATTGTAATGTTCATTGTTGCTTGTATATTATGTGTTTTATCAATGTTGTATGCAATTGGAAGCAGAGAATTGTCTCTCAAAGCCGCTTTAGATGTTATATCTTTTCCAGGAGCAACTTTGCTTCTGTTATGCACTTACAAAGCATGTAAACGTGAAGACGGCGATGCTGACAGAGAAACTACTGAAAGGCTTTATACTCCCTTAAATAGCCAGTTCAATGATATTTCTCAATGTCATGTCACCCCATTTGCCAAAGCTGGATTCTTTAGTAAGATATCTTTTTGGTGGTTGAATCCGTTGATGAAAAGGGGTCAACAAAAAACACTTCAAGATGACGATATCCCAAAGTTAAAAGAGTCTGAACGAGCAGAAAATTGTTATTTTGCCTATGAAGCATCAAGACACTCATCGGTATTATGGACAATAATTTTGTGCCATAGGAGAGATATTCTGATAACGGGATTCTTCGCTTTGCTCAAGGTACTTGCAATATCTTGTGGCCCTCTACTTCTGAATGCGTTTATATTAGTTTCTGAAGGTAATGAAAGTTTCAAATATGAAGGCTATGCATTGGTTATATTACTTTTCTTCATAAAGATCATAGAGTCCTTATCACAAAGACAATGGTATTTCCAATGTAGACTTGTTGGGATGAAAGTGAGATCACTACTTACCGCAAACATTTATAAAAAGATACTAAGGCTATCCAATTCTGCTAGATTGATTCACTCTAGTGGTGAGATAATGAATTACATAACTGTGGATGCTTATAGAATTGGAGAATTTCCATTCTGGTTTCACCAGACATGGACGACAATCCTTCAATTGTGTATTGCATTAGTAATTCTTTACCGAGCAATTGGACTAGCAACAATAGCTTCAATGGTGGTGATAGTTCTGACTGTGCTTTGCAACACTCCAATAGCAAAGTTACAAAACAAGTTTCAGAGCGAACTTATGGTGGCACAAGACGAGAGATTGAAGGCTAGTTCCGAGGCTCTTGTGAATATGAAAGTGCTCAAGTTATATGCATGGGAAAACCATTTTAAAAATGCTATAGAAAAGTTGAGAAATGCAGAACTCAAATTGATATCATCGGTTCAATTAAGTAGGGCATACCTTCTCTTCCTCTTTTGGAGCTCACCGGTGTTGGTGTCTGCTGCTTCTTTTCTAGCATGTTACTTCCTTAAAATTCCTTTGCATGCAAGTAATGTTTTCACTTTTGTGGCAACATTAGGCCTTGTTCAAGTGCCAATTACAGGTATACCGGATGTTATTACGGTGATCATTCAAGCAAAAGTTGCATTTGCTCGGATATGTAATTTCCTTGAGGCACCAGAACTAAAGAGTGAAAGTTTCAATAACATCATCTGTAATGACAACCTCAGGGGCTCAGTTTTAATAAAATCAGCCGACTTTTCATGGGAAGGTAATGCATCAAAGCCAACACTAAGAAACATAAACTTGGATGTTAGACGTGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCAGGAAAATCAACGATTGATATTTACGGGAAGTTCGCATATGTTTCTCAAACAGCATGGATACAAACAGGTACAATACGGGAAAATATTTTGTTTGGATCGGAGTTGGATGATCAAAGATATCAAGAAACACTTCAAAGGTCATCATTGGTAAAGGACCTTGAGTTACTTCCCTATGGCGATCTCACAGAAATAGGCGAGAGAGGAGTTAATTTAAGCGGAGGTCAGAAGCAGCGAATTCAACTAGCTCGTGCTCTTTATGAGAACGCTGATATATATCTCTTGGATGATCCGTTTAGTGCTGTTGATGCACATACGGCAAAAAGTTTGTTCAATGAATACATCATGGAAGGACTCAAAGGGAAAACCGTCTTACTCGTGACTCATCAAGTCGACTTTCTGCCAGCATTTGATTTTGTTTTGTTAATGTCAGAAGGGGTAATCCTACAAGAAGGTCCATATCAGCAGCTTTTGACGACAAGCCAAGAATTCCAAGACCTTGTCAATGCTCACAAGGTTACCGATGGTTCAAACCAGCTTGCAAATGCTACTTTTTCTCAAGCTTCTATAAAGATTACACAAGCTTTAGTAGAAAATAAGGGTAAAGAAGCAAATGGAAATCAATTAATCAAGCAAGAAGAAAGAGAGAAAGGAGACAAAGGGTTGAAGCCGTACTTACAATATCTGAATCAGATGAAAGGCTATATATTCTTCTTCGTGGCTTCCCTTGGTCACCTTATTTTTCTGGTTTGTCAGATATTGCAAAACTCATGGATGGCTGCTAATGTAGACAATCCTCGTGTCAGCACGTTGCAGTTGATTTTAGTTTACTTCCTACTTGGAGCTTCTTCGGCATTTTTCATGTTGACTAGAAGTCTATTTGTAGTTGCTTTGGGTCTTCAATCCTCAAAATTCTTATTTCTACAGTTGATGAACTCCCTCTTTCGTGCACCGATGTCTTTTTATGACGCTACACCATTGGGAAGGATACTAAGTAGGGTTTCATCTGATCTGAGCATTATGGATCTTGACATCCCATTTAGCCTCACTTTTGCGGTTGGAACCACTATGAATTTTTATTCTAGTCTTGCAGTTTTAGGAGTTGCAACTTGGCAAGTATTGATTGTTGCGATACCAATGGTTTACGTTACAGTTCGCTTGCAGAGATACTACTTCACCGCAGCAAAAGAAGTGATGCGGATAAGTGGCACAACGAAATCCTTTCTAGCTAATCATGTAGCTGAAACTGTTGCCGGAGCAGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTCTTTCAGAAGAATCTTGATCTAATTGACATTAATGCTAGTGCATTTTTTCATAATTTTGCCTCAAACGAGTGGTTGATCCAACGGTTAGAAACAATTGGTGCAGGTGTTCTTGCCTCTGCAGCACTTTGCATGGTTATACTTCCATCAGGGACTTTCACCTCTGGATTTATTGGCATGGCTCTATCTTATGGCCTTGCACTAAATTCTTACTTAGTAAATTCAATTCAATGTCAGTGCACTCTTGCAAATCAGATAATATCAGTTGAGAGGCTAGATCAATATATGCATATACAAAGTGAGGCCAAAGAAATCGTAGAAGGAAATCGCCCTCCTTTGAACTGGCCAATTGCAGGCAAAGTAGAAATAAATGACTTGAAGATACGATACAGGCCTGACGGACCACTTGTACTTCATGGTATCACATGCACATTTGAAGCAGGTCACAAGATTGGTATTGTCGGAAGAACAGGCAGCGGGAAATCCACTCTTATTAGTGCTTTATTTCGTCTTGTGGAACCAACAGGAGGAAACATTATGGTTGATGGCATAGACATCTCATCTATTGGCCTTCATGATTTGAGGTCGCATTTTGGGATTATACCTCAAGATCCTACGCTTTTTAACGGGACAGTCAGATATAACTTGGACCCTTTATCTCAACACAGTGATCAAGAGATATGGGAGGTTCTTGGAAAGTGTCAATTGCGAGAAGTTGTCCAAGAGAGAGACGAGGGCTTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCGCTTTTAAGGAGAAGTCGAATATTGGTACTCGATGAAGCAACTGCATCGATTGATAACTCAACTGATCTGATTCTGCAGAAAACCATTAGAACTGAGTTTGCAGATTCTACGGTGATCACAGTAGCTCACAGGATACCGACTGTGATGGATTGCACTATGGTTCTTTCAATCAGTGATGGAAAACTGGCGGAGTATGACGAGCCAACAAACTTGATGAAGAGAGAAGAATCGTTGTTCAGGAAACTTGTCAAGGAATACTGGTCTCATTTTCAGTCTCCAGAGTCACATTGA 4332 0.3917 MEDYWSIICSENGGNLFGYDFKLLTDPSSCINHFLLIFFDFLMVIMLTIIMFQNSSSRPFWSLVRYSNLQLVSSITNGSLGFLHLCLGIRDLEQKIRKNHNAFPINWWLLELFHGSTWLFVSLTISLRIKQLPRAWLLLFSIVMFIVACILCVLSMLYAIGSRELSLKAALDVISFPGATLLLLCTYKACKREDGDADRETTERLYTPLNSQFNDISQCHVTPFAKAGFFSKISFWWLNPLMKRGQQKTLQDDDIPKLKESERAENCYFAYEASRHSSVLWTIILCHRRDILITGFFALLKVLAISCGPLLLNAFILVSEGNESFKYEGYALVILLFFIKIIESLSQRQWYFQCRLVGMKVRSLLTANIYKKILRLSNSARLIHSSGEIMNYITVDAYRIGEFPFWFHQTWTTILQLCIALVILYRAIGLATIASMVVIVLTVLCNTPIAKLQNKFQSELMVAQDERLKASSEALVNMKVLKLYAWENHFKNAIEKLRNAELKLISSVQLSRAYLLFLFWSSPVLVSAASFLACYFLKIPLHASNVFTFVATLGLVQVPITGIPDVITVIIQAKVAFARICNFLEAPELKSESFNNIICNDNLRGSVLIKSADFSWEGNASKPTLRNINLDVRRGQKVAICGEVGSGKSTIDIYGKFAYVSQTAWIQTGTIRENILFGSELDDQRYQETLQRSSLVKDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYENADIYLLDDPFSAVDAHTAKSLFNEYIMEGLKGKTVLLVTHQVDFLPAFDFVLLMSEGVILQEGPYQQLLTTSQEFQDLVNAHKVTDGSNQLANATFSQASIKITQALVENKGKEANGNQLIKQEEREKGDKGLKPYLQYLNQMKGYIFFFVASLGHLIFLVCQILQNSWMAANVDNPRVSTLQLILVYFLLGASSAFFMLTRSLFVVALGLQSSKFLFLQLMNSLFRAPMSFYDATPLGRILSRVSSDLSIMDLDIPFSLTFAVGTTMNFYSSLAVLGVATWQVLIVAIPMVYVTVRLQRYYFTAAKEVMRISGTTKSFLANHVAETVAGAVTIRAFEEEDRFFQKNLDLIDINASAFFHNFASNEWLIQRLETIGAGVLASAALCMVILPSGTFTSGFIGMALSYGLALNSYLVNSIQCQCTLANQIISVERLDQYMHIQSEAKEIVEGNRPPLNWPIAGKVEINDLKIRYRPDGPLVLHGITCTFEAGHKIGIVGRTGSGKSTLISALFRLVEPTGGNIMVDGIDISSIGLHDLRSHFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLREVVQERDEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLILQKTIRTEFADSTVITVAHRIPTVMDCTMVLSISDGKLAEYDEPTNLMKREESLFRKLVKEYWSHFQSPESH* 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0941 1443 Pfam ABC transporter transmembrane region 292 554 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0941 1443 Pfam ABC transporter transmembrane region 881 1139 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0941 1443 CDD ABC_6TM_ABCC_D1 293 580 IPR044746 GO:0140359
Mtr6g0941 1443 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 881 1160 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0941 1443 Gene3D ABC transporter type 1, transmembrane domain 276 590 IPR036640 GO:0005524|GO:0016021
Mtr6g0941 1443 SMART AAA_5 1223 1406 IPR003593 -
Mtr6g0941 1443 SMART AAA_5 634 792 IPR003593 -
Mtr6g0941 1443 SUPERFAMILY ABC transporter transmembrane region 868 1177 IPR036640 GO:0005524|GO:0016021
Mtr6g0941 1443 CDD ABC_6TM_ABCC_D2 879 1172 IPR044726 GO:0140359
Mtr6g0941 1443 Gene3D - 1181 1432 IPR027417 -
Mtr6g0941 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1197 1431 IPR003439 GO:0005524
Mtr6g0941 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 599 815 IPR027417 -
Mtr6g0941 1443 Pfam ABC transporter 1214 1362 IPR003439 GO:0005524
Mtr6g0941 1443 Pfam ABC transporter 656 744 IPR003439 GO:0005524
Mtr6g0941 1443 CDD ABCC_MRP_domain2 1195 1415 - -
Mtr6g0941 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1187 1430 IPR027417 -
Mtr6g0941 1443 Gene3D - 591 839 IPR027417 -
Mtr6g0941 1443 Gene3D ABC transporter type 1, transmembrane domain 845 1179 IPR036640 GO:0005524|GO:0016021
Mtr6g0941 1443 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 64 1443 - -
Mtr6g0941 1443 ProSitePatterns ABC transporters family signature. 717 731 IPR017871 GO:0005524
Mtr6g0941 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 815 IPR003439 GO:0005524
Mtr6g0941 1443 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 292 572 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0941 1443 SUPERFAMILY ABC transporter transmembrane region 280 588 IPR036640 GO:0005524|GO:0016021
Mtr6g0941 1443 CDD ABCC_MRP_domain1 607 791 - -
Mtr6g0941 1443 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 64 1443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0941 Mtr-Chr6 12257112 12264119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0941 579 840 Calmodulin-binding Proteins AT2G36910 28.669 1.04e-23 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0941 K05666 - gmx:100787314 2191.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0941 6 12257112 12264119 Mtr1g3675 1 48453841 48461146 PCT