Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0937 ATGGCCAATTTTTGGAGCATGATTTGTGGGAACTATGGTTCTTATGAGAATGACAAAGAAATTGGTGAGAGCCTTTGTGCTCCTTTAAATGGTCAGTTCAATGAAGTTGATTCTGTTAGCAATGTAACTCCATTTTCTAAATCTGGATTCATTAGTAAGATTTGGTTTTGGTGGTTGAATCCATTAATGAAAAGGGGTCAAGAAAAGACGCTTCTCGATGAGGAAATCCCAGGTTTAAGAGAGTCCGAGCGAGCAGAAACTTGTTATTTTTCATTTGTAGAACAGTTAAACAAACAAAATCAACATGAACCATCATCACATTCGTCCGTTTTATGGACAATAATTGCGTGCCACCAAAGAGAGATTTTGATAACCGGATTCTTTGCTTTGCTCAAGGTACTCACTCTATCTTCTGGTCCTTTACTTCTGAATGAGTTTATATTGGTTGCTGAAGGCAATAAAAGTTTTGAATATGAAGGTTATGTATTGGCAATATCACTTTTCTTTATAAAGATCCTAGAATCCTTATCGCAACGACAATGGTATTTCCGTAGTAGGCTTATAGGGATGAAGGTCAGATCACTACTTACTGCAGCCATTCATAAAAAAATATTAAGGCTATCCAACTCTGCTAGATTAGTTCACTCTAGTGGCGAGATAATGAATTATATGACTGTGGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCACAAGACTTGGACAACAATTCTTCAACTGTGTATTGCATTAGTGATTCTTTTTCGTGCAATCGGACTTGCAACCGTAGCTTCACTGGTAGTGATAATTCTCACCGTGCTTTGCAACACTCCGCTAGCAAAGCTACAACACAAGTTTCAGAGCAAACTAATGGTGGCGCAAGATGAGAGATTAAAAGCGAGTTCTGAGGCTCTTGTGAATATGAAAGTGTTGAAGCTATATGCATGGGAAACCCATTTTAAAAATTCCATATATTACCTAAGAAATGTGGAACTCAAGTTGTTATCTGCAGTGCAATTAAGAAGAACATACCTTGTCTTTCTTTTTTGGAGCTCACCGATGTTGGTGTCTTCGGCTTCTTTTCTGGTCTGTTACTTCTTGAAAGTTCCTTTGCATGCAAGTAATGTTTTCACTTTTGTGGCAACATTACGCCTTGTTCAAGATCCTATTACAGGTATTCCAGATGTTATTGCGGTGATTATTCAAGCAAAAGTTGCATTTGCTAGGATTGTTAATTTTCTCCAAGCACAAGAACTGCAAAGTGAAAATTTTAAGAACCGATGCTTAAATGATAACCTTAAAGGCTCAGTCTTTATCGAATCGGCTGACTTTTCATGGGAAAGTAATGCAATAAAGCCAACACTAAGAAGCATAAATTTGGACGTTAAACATGGACAAAGGGTGGCTATTTGTGGCGAAGTTGGCTCAGGAAAATCAACCATCTTAGCAACAATTCTTGGAGAAATTTCTAACACAAAAGGAGATATTGAAGTTCACGGGAAGTTTGCATATGTTTCTCAAACATCATGGATACAAACAGGTACAATACGGGAAAATATTTTATTTGGATCCGAATTGGATGATCAAAGATATCAAGAAACACTTCGAAGGTCTTCATTGGTAAAGGACCTCGAGTTGTTTCCCTATGGTGACCTCACTGAAATAGGTGAGAGAGGAGTTAATTTAAGTGGAGGTCAAAAACAACGAATTCAACTTGCTCGTGCTCTCTATCAAAATGCTGATTTATATCTATTGGATGATCCATTTAGTGCTGTTGATGCGCATACTGCAAAAAAATTGTTCAATGAATACATCATGGAAGGACTCAAAGGGAAAACTATCTTACTTGTGACTCATCAAGTCGACTTCCTCCCAGCATTTGATTACATTTTGTTGATGTCAGATGGCGTAATCCTACAAGCTGGTTCATATCACGATCTACTGACCTCAAGTACAGAATTCCAAGGCCTTGTCGGTGCTCACAAAAACACCGCTGGTTCTGACCAGCTTCTGAATGCTAATTTTTCACAGAGACATTCAACTTCTATAAAGATTACACAAGCTTTAGTGGAGAAGCGATTTGCAGCACCAAATGGAAAACAATTAATCAAGCAAGAAGAAAGAGAAAGAGGAGACTTAGGATTGAGGCCGTATTTACAATATATGAATCAGATGAAAGGCTATATATACTTTGTTGTGGCGTCCCTTTGTCACCTTATTTTTGTTGTCTGTCAAATATTTCAAAACTCATGGTTGGCGGCTAATGTTGACAATCCCCGTGTCAGCACGTTGCAATTGATTTTAGTTTATTTCCTTATCGGTGTTTCTTCAACATTTTTCTTACTGATCAGAAGTCTACTTTTGGTTGCTTTGGGTCTTCAATCATCGAAGAATTTATTTTCACTGTTGATGAACTCCCTCTTTCGTGCACCCATGTCCTTTTATGATTCTACACCATCAGGAAGGATACTTAGTAGGGTCTCATCTGATCTGAGCATTATGGATACTGACATCCCATTCAGCCTCACTTTTGCTGTGGCAGGAACTCTAGTATTTTATTCCAGTCTAACAGTTTTGGCAGTTGTCACTTGGCAAGTCTTGGTTCTTGCTATTCCAATGGTTTATGTTGCAATTTACTTGCAGCGATACTACTTTGCGGTAGCAAAAGAAGTAATGAGGATAAATGGCACAACAAAATCCTCTATAGCTAATCATGTAGCTGAAACTGTTGCTGGAGCTATGACAATAAGGGCTTTTAAGGAGGAGGCTCATTCTTTTGAGAAGAACCTTTGTCTAATTGATTTAAATGCTAGTGCTTTTTTCCATAGTTTTGCTTCAAATGAGTGGTTGATCCAACGGTTAGAAACAATCAGTGCAGTCGTTCTCACTGCTGCAGCACTTTGCATAGTTATGCTACCCTCTGGAACTTTCACCTCAGGAATTATTGGCATGGCTCTAACTTATGGCCTTTCACTAAACGGTGCCTTAATATTTTCAATTCAAAATCAATGCACTCTTGCAAATAACATAATATCAGTAGAGAGGCTAAATCAATATATGCATATAGAAAGTGAAGCGGAAGAAATAGTAGAAGAAAATCGTTCTCCTTCGAATTGGCCAGTTGCTGGCAAAGTAGAAATAAATGACTTGAAGATTCGTTACAGACCTGACGGACCACTAGTACTTCACGGGATCACATGCACATTCAAAGCAGGGCACAAGATTGGTATCGTCGGAAGAACAGGCAGCGGGAAATCCACTCTTATCAGTGCTTTATTTCGTCTTGTGGAACCAGCAGGAGGAAAAATTATAGTCGATGGAATAGACATATCATCTATTGGTCTTCATGATTTGAGGTCACGTTTTGGTATTATACCTCAGGAGCCTACCCTTTTTAATGGGACAGTAAGATATAATTTGGACCCTTTATCTCAACACACTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAAGTTGTCCAAGGAAAAGAAGAGGGTTTAAACTCATCAGTTGTTGAAGATGGATCAAATTGGAGCATGGGACAAAGGCAGTTATTTTGTTTGGGGCGTGTACTTTTGAGGCGAAGTAGGATATTGGTGTTGGACGAAGCAACTGCTTCAATTGATAATTCTACTGATCTTATTCTGCAGAAAACCATTAGGGCTGAGTTTGCAGATTGTACGGTGATCACAGTAGCACACAGGATACCAACTGTAATGGATTGCACTATGGTTCTTGCTATAAGTGATGGAAAACTAGCGGAGTATGACGAGCCAACGAACTTGATGAAGAGAGAAGAATCATTGTTCAGGAAGCTTGTCAAGGAATACTGGTCAAATTCTCAGTCTGCAGAATCGAATTAA 3879 0.3867 MANFWSMICGNYGSYENDKEIGESLCAPLNGQFNEVDSVSNVTPFSKSGFISKIWFWWLNPLMKRGQEKTLLDEEIPGLRESERAETCYFSFVEQLNKQNQHEPSSHSSVLWTIIACHQREILITGFFALLKVLTLSSGPLLLNEFILVAEGNKSFEYEGYVLAISLFFIKILESLSQRQWYFRSRLIGMKVRSLLTAAIHKKILRLSNSARLVHSSGEIMNYMTVDAYRIGEFPFWFHKTWTTILQLCIALVILFRAIGLATVASLVVIILTVLCNTPLAKLQHKFQSKLMVAQDERLKASSEALVNMKVLKLYAWETHFKNSIYYLRNVELKLLSAVQLRRTYLVFLFWSSPMLVSSASFLVCYFLKVPLHASNVFTFVATLRLVQDPITGIPDVIAVIIQAKVAFARIVNFLQAQELQSENFKNRCLNDNLKGSVFIESADFSWESNAIKPTLRSINLDVKHGQRVAICGEVGSGKSTILATILGEISNTKGDIEVHGKFAYVSQTSWIQTGTIRENILFGSELDDQRYQETLRRSSLVKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADLYLLDDPFSAVDAHTAKKLFNEYIMEGLKGKTILLVTHQVDFLPAFDYILLMSDGVILQAGSYHDLLTSSTEFQGLVGAHKNTAGSDQLLNANFSQRHSTSIKITQALVEKRFAAPNGKQLIKQEERERGDLGLRPYLQYMNQMKGYIYFVVASLCHLIFVVCQIFQNSWLAANVDNPRVSTLQLILVYFLIGVSSTFFLLIRSLLLVALGLQSSKNLFSLLMNSLFRAPMSFYDSTPSGRILSRVSSDLSIMDTDIPFSLTFAVAGTLVFYSSLTVLAVVTWQVLVLAIPMVYVAIYLQRYYFAVAKEVMRINGTTKSSIANHVAETVAGAMTIRAFKEEAHSFEKNLCLIDLNASAFFHSFASNEWLIQRLETISAVVLTAAALCIVMLPSGTFTSGIIGMALTYGLSLNGALIFSIQNQCTLANNIISVERLNQYMHIESEAEEIVEENRSPSNWPVAGKVEINDLKIRYRPDGPLVLHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIIVDGIDISSIGLHDLRSRFGIIPQEPTLFNGTVRYNLDPLSQHTDQEIWEVLGKCQLREVVQGKEEGLNSSVVEDGSNWSMGQRQLFCLGRVLLRRSRILVLDEATASIDNSTDLILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPTNLMKREESLFRKLVKEYWSNSQSAESN* 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0937 1292 CDD ABCC_MRP_domain1 440 637 - -
Mtr6g0937 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1037 1279 IPR027417 -
Mtr6g0937 1292 CDD ABC_6TM_ABCC_D1 124 411 IPR044746 GO:0140359
Mtr6g0937 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 660 IPR027417 -
Mtr6g0937 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 733 1009 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0937 1292 SUPERFAMILY ABC transporter transmembrane region 111 411 IPR036640 GO:0005524|GO:0016021
Mtr6g0937 1292 Pfam ABC transporter transmembrane region 730 995 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0937 1292 Pfam ABC transporter transmembrane region 123 380 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0937 1292 CDD ABCC_MRP_domain2 1044 1264 - -
Mtr6g0937 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 123 403 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0937 1292 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 15 1291 - -
Mtr6g0937 1292 ProSitePatterns ABC transporters family signature. 563 577 IPR017871 GO:0005524
Mtr6g0937 1292 Gene3D - 1029 1281 IPR027417 -
Mtr6g0937 1292 Gene3D - 434 666 IPR027417 -
Mtr6g0937 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 440 661 IPR003439 GO:0005524
Mtr6g0937 1292 Gene3D ABC transporter type 1, transmembrane domain 93 419 IPR036640 GO:0005524|GO:0016021
Mtr6g0937 1292 Gene3D ABC transporter type 1, transmembrane domain 695 1028 IPR036640 GO:0005524|GO:0016021
Mtr6g0937 1292 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 15 1291 - -
Mtr6g0937 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1046 1280 IPR003439 GO:0005524
Mtr6g0937 1292 SUPERFAMILY ABC transporter transmembrane region 729 1028 IPR036640 GO:0005524|GO:0016021
Mtr6g0937 1292 CDD ABC_6TM_ABCC_D2 732 1021 IPR044726 GO:0140359
Mtr6g0937 1292 Pfam ABC transporter 1063 1211 IPR003439 GO:0005524
Mtr6g0937 1292 Pfam ABC transporter 456 590 IPR003439 GO:0005524
Mtr6g0937 1292 SMART AAA_5 465 638 IPR003593 -
Mtr6g0937 1292 SMART AAA_5 1072 1264 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0937 Mtr-Chr6 12221830 12227481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0937 432 654 Calmodulin-binding Proteins AT2G36910 32.068 6.16e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0937 K05666 - gmx:100787314 1988