Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0936 ATGGATAAATTTTGGAGCATGATTTGTGGGGACTGTCCTACTGAGAATGGAGGAAAGCCTTTTTGTTATGATGTAAAACTTTTAAAAGATCCATCCTCATGCATCAACCATTTGTTGGTAATTTTCTTTGATGTGTTCTTGTTGATCATATTATCATTCAACATGATCCTGAAGTCTTCTTCGAGGCCATTTCGGAGTCTAGTACAATATTCAAACTTGCAGCTAGTTTCTACCATTATCAATGGCTCTCTTGGGTTTTTGCATTTATGTTTAGGAATTTGGGTATTAGAAGAGAATATAAGGAAAAACCACGACGCATTTCCTCTTAATTGGTGGTTGCTCGAACTCTTTCATGGATCAACATGGTTGTTTGTAAGTTTAACTATAAGTCTTCAGATAAAACAACTGCCAAGAGCATGGTTTTGGATGTTTTCTATTCTCATATTTTTTGTTTCTTCTATATTATGTCCTTTATCCATATTTTATGCAATTGGCAGCAGAAAATTGTCCTTCAAGGCAACTTTAGATTTTTTATCTGCTATAGGAGCAACTTTACTGTTGTTATGCACATACAAAGCATGTCAATGTGAAGATGTTGATAGAGAAACTGTTGAAAGCCTTTATGCCCCCATAAATATGCAATTAAATGATGTTACTGATAGCCATTTAACCCCATTTGCCAAAGTTGGGTTCATTAGTAAAACATCGTTTTCGTGGTTGAATCCATTGATGAAAAGGGGTCAAGAAAAAGAACTTCAAGATGAGGATATCCCGAAGCTAAGAGAGTCCGAGAGAGCAAAAAGTTGTTATTCTTCATTCGAAGAACAGTTATACAAGCATAGGCAAAATGAACCATCATCAGATTCATCGGTTTTATGGACAATAGTTCGGTGCCACCGAAGAGAGATTTTAATAACAGGATTCTTTGCTTTGCTCAAGGTACTTGCTATATCTTGTGGCCCTTTACTTCTTAATGCTTTTATATTGGTTTCTGAGGGAAATGAAAGTTTCAAATATGAAGGTTATATATTGGCCATATCACTTTTCTTCATAAAGATCATAGAATCCATATCACAGAGACAATGGTATTTTCGCGGAAGACTTGTTGGCATGAAAGTTAGATCACTACTTACCGCAGTCGTTTATAAAAAAACATTAAGACTATCCAATTCTGCTAGATTGATTCACTCGAGTGGCGAGATAATGAATTATATGACTGTGGACACTTATAGAATTGGAGAATTTCCATTCTGGTTTCACCAGACTTGGACCACAATCCTCCAAATGTGTATTGCATTAGTAATTCTTTTTGGTGCAATTGGACCAGCAACAATAGCTTCAATGGCAGTGATAGTTCTCACGATGCTTTGCAACACTCCACTAGCAAAGTTGCAACACAAGTTTCAGAGTGAACTTATGGTGGCACAAGACGAGAGATTGAAGGCTAGTTCTGAGGCTCTTGTGAGTATGAAAGTGCTAAAGCTATATGCATGGGAAACACATTTTAAAAGTTCTATAGAAAAATTAAGAAATGTGGAACTCAAATTGCTATATGCAGTGCTACTAAGAAAGGCATACATTGTCTTTCTATTTTGGACCTCGCCGGTGTTGGTATCTGCTGCTTCTTTTATAGCATGTTACTTCCTGAAAGTTCCTTTGCGTGCAAGCAATGTTTTCACTTTCGTAGCAACTTTACGCCTTGTTCAAGAGCCAATTCTAGCAATCCCAGATGTTGTTGCTGTGATTATTCAAGCCAAAGTCGCATTTTCTCGGATTCAAAATTTTCTTGAGGCTCCAGAACTGCAGAGTGAAAATTTGAAGAACATGTGCAATAATGATAACCTCAAAGGCTCAGTTTTAATAAAATCAGCCGACTTTTCATGGGAAGGTAAGGCATCAAATCCAACACTAAGAAACATAAATTTGGACGTTAGACGTGGGCAAAAGGTGGCTATCTGTGGAGAAGTTGGCTCAGGAAAATCAACCCTCTTAGCAACAATTCTCGGAGAAGTTCCAAATACAAAGGGAACTATTGATGTTTATGGAAAGTTTGCATATGTTTCTCAAACAGCGTGGATACAAACAGGTACAATACGGGAAAATATTTTGTTTGGATCCGAGTTAGATGATCAAAGATATCAAGAAACACTTCAAAGGTCTGCACTGATAAAGGACCTTGAGTTGTTTCCCTATGGTGACCTCACCGAAATAGGCGAGAGAGGAGTTAACTTAAGTGGAGGTCAGAAGCAGCGAATTCAACTAGCTCGTGCTCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCAAAAAGTTTGTTTAATGAATACATCATGGACGGACTCAAAGGGAAGACTCTCGTACTCGTGACTCACCAAGTTGACTTTCTCCCAGAATTTGATTCTGTCTTGTTGATGTCAGATGGGGTAATCTTACAAGCCGGTCCTTATCATCAACTATTGACCACAAACAAGGAATTCGAAAACCTTGTCAATGCTCACAAGGAGACCGTTGATTCTAACCAGTTTCCGAACTTTTCTTTTTCTCAAGGATATTCAACTTCTAGAAAGATGGCTCAAGATATCATGGAAAATCCATTTAAAGAAACAAATGGAAATCAATTAATTAAGCAAGAAGAAAGAGAGAGAGGAGACAAAGGGTTGAAGCCTTACTTACAATATTTGAATAATATGAAAGGCTATATTTTCTTCTTTGTTTCTACATTTAGTCACCTTATTTTTGTGGTTTGTCAAATACTACAAAACTTGTGGATGGCTGCTAACGTTGACAATCCTCGTGTCAGCATGTTGCAGTTGATTTTAGTATATTCCCTGATTGGATTTTCTTCAGCATTTTTCATGTTGATACGAAGTCTATTTGTAGTTTCTTTAGGTCTTCAATCTTCAAAATATTTATTTTTACGATTGATGAAGTCCCTCTTTCGTGCACCAATGTCTTTTTATGACGCTACACCATTGGGAAGGATACTAAGTAGGGTTTCATCTGATCTTAGCATTTTGGATCTGGACATGCCATTTAGCTTATGTTTTTCGGTGGGAAGCACTATAATTTTCTATTCTACTCTTACAATTTTAGCTGTTGTCACTTGGCAAGTAATAATTGTGGTTATACCGATGGTTTATGTTACACTTCGCTTGCAGAGATACTACTTCACCGCTGCAAAAGAAGTGATGCGTATAAGTGGCACAACGAAATCCTATGTAGCTAATCATGTAGCTGAAACTGTTGCCGGAGCAGTGACAATAAGAGCTTTTGAGGAGGAAGATCGCTTTTTTGAGAAGAATCTTGATCTAATAGACATTAATGCTAGTGCATTTTTTCATAATTTTGCCTCAAATGAGTGGTTGATCCTACGGTTAGAAACAATAGGTGCAAGTCTTCTTGCCACTACAGCGCTTTGCATGGTTATGCTTCCATCGGGGACTTTCAGTTCCGGATATATCGGCATGGCTTTGTCTTATGGTCTTACACTAAATGCTTCCTTGGTATATACAACTCAAATTCAATGCACTCTTGCAAATCATATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCTAAAGAAATTGTAGAAGGAAATCATCCTCCTTTGAATTGGCCAGTTGCAGGCAAAGTCGAAATATGTGACCTGAAGATACGATACAGGCCTGATGGACCACTTGTACTTCACGGGATCACATGCACATTTGAAGCAGGTCACAAGATTGGTATTGTTGGAAGAACAGGCAGTGGGAAATCCACTCTTATCAGTGCTTTATTTCGTCTTGTGGAACCAACCGAAGGAAAAGTCGTAGTTGATGGCATAGACATCTCATCTATTGGCCTTCATGATTTGAGGTCACGTTTTGGAATTATACCTCAAGATCCTACACTTTTTAACGGGACAGTAAGATTTAACTTGGACCCTTTATCTCAACACACCGATCAAGAGATATGGGAGGTTCTTGGAAAGTGTCAATTGCGAGAAGTTGTCCAAGAGAAAGGCGAGGGCTTAAACTCCACAGTTGTTGATGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCACTTTTAAGGAGAAGTCGAATATTGATACTTGATGAAGCAACTGCATCGATTGATAACTCAACTGATCTGATTCTGCAGAAAACTATTAGAACTGAGTTTGCAGATTGTACGGTGATCACAGTAGCTCACAGGATACCAACTGTGATGGACTGCAATATGGTTCTTTCAATCAGTGATGGAAAATTGGCGGAGTATGACGAGCCAATGAACTTGATGAAGAGAGAAGAATCGATGTTTAGGAAGCTTGTAAAAGAATATTGGTCTCATTCTCAGTCTGGAAATTTGCATTGA 4422 0.3801 MDKFWSMICGDCPTENGGKPFCYDVKLLKDPSSCINHLLVIFFDVFLLIILSFNMILKSSSRPFRSLVQYSNLQLVSTIINGSLGFLHLCLGIWVLEENIRKNHDAFPLNWWLLELFHGSTWLFVSLTISLQIKQLPRAWFWMFSILIFFVSSILCPLSIFYAIGSRKLSFKATLDFLSAIGATLLLLCTYKACQCEDVDRETVESLYAPINMQLNDVTDSHLTPFAKVGFISKTSFSWLNPLMKRGQEKELQDEDIPKLRESERAKSCYSSFEEQLYKHRQNEPSSDSSVLWTIVRCHRREILITGFFALLKVLAISCGPLLLNAFILVSEGNESFKYEGYILAISLFFIKIIESISQRQWYFRGRLVGMKVRSLLTAVVYKKTLRLSNSARLIHSSGEIMNYMTVDTYRIGEFPFWFHQTWTTILQMCIALVILFGAIGPATIASMAVIVLTMLCNTPLAKLQHKFQSELMVAQDERLKASSEALVSMKVLKLYAWETHFKSSIEKLRNVELKLLYAVLLRKAYIVFLFWTSPVLVSAASFIACYFLKVPLRASNVFTFVATLRLVQEPILAIPDVVAVIIQAKVAFSRIQNFLEAPELQSENLKNMCNNDNLKGSVLIKSADFSWEGKASNPTLRNINLDVRRGQKVAICGEVGSGKSTLLATILGEVPNTKGTIDVYGKFAYVSQTAWIQTGTIRENILFGSELDDQRYQETLQRSALIKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKSLFNEYIMDGLKGKTLVLVTHQVDFLPEFDSVLLMSDGVILQAGPYHQLLTTNKEFENLVNAHKETVDSNQFPNFSFSQGYSTSRKMAQDIMENPFKETNGNQLIKQEERERGDKGLKPYLQYLNNMKGYIFFFVSTFSHLIFVVCQILQNLWMAANVDNPRVSMLQLILVYSLIGFSSAFFMLIRSLFVVSLGLQSSKYLFLRLMKSLFRAPMSFYDATPLGRILSRVSSDLSILDLDMPFSLCFSVGSTIIFYSTLTILAVVTWQVIIVVIPMVYVTLRLQRYYFTAAKEVMRISGTTKSYVANHVAETVAGAVTIRAFEEEDRFFEKNLDLIDINASAFFHNFASNEWLILRLETIGASLLATTALCMVMLPSGTFSSGYIGMALSYGLTLNASLVYTTQIQCTLANHIISVERLNQYMHIQSEAKEIVEGNHPPLNWPVAGKVEICDLKIRYRPDGPLVLHGITCTFEAGHKIGIVGRTGSGKSTLISALFRLVEPTEGKVVVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRFNLDPLSQHTDQEIWEVLGKCQLREVVQEKGEGLNSTVVDDGSNWSMGQRQLFCLGRALLRRSRILILDEATASIDNSTDLILQKTIRTEFADCTVITVAHRIPTVMDCNMVLSISDGKLAEYDEPMNLMKREESMFRKLVKEYWSHSQSGNLH* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0936 1473 CDD ABC_6TM_ABCC_D1 305 592 IPR044746 GO:0140359
Mtr6g0936 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 584 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0936 1473 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 66 1473 - -
Mtr6g0936 1473 CDD ABCC_MRP_domain2 1225 1445 - -
Mtr6g0936 1473 ProSitePatterns ABC transporters family signature. 744 758 IPR017871 GO:0005524
Mtr6g0936 1473 SUPERFAMILY ABC transporter transmembrane region 292 597 IPR036640 GO:0005524|GO:0016021
Mtr6g0936 1473 Pfam ABC transporter 637 771 IPR003439 GO:0005524
Mtr6g0936 1473 Pfam ABC transporter 1244 1392 IPR003439 GO:0005524
Mtr6g0936 1473 Gene3D - 617 850 IPR027417 -
Mtr6g0936 1473 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 66 1473 - -
Mtr6g0936 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 914 1190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0936 1473 SUPERFAMILY ABC transporter transmembrane region 899 1207 IPR036640 GO:0005524|GO:0016021
Mtr6g0936 1473 Gene3D - 1211 1463 IPR027417 -
Mtr6g0936 1473 Pfam ABC transporter transmembrane region 304 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0936 1473 Pfam ABC transporter transmembrane region 911 1176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0936 1473 CDD ABC_6TM_ABCC_D2 909 1202 IPR044726 GO:0140359
Mtr6g0936 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 842 IPR027417 -
Mtr6g0936 1473 Gene3D ABC transporter type 1, transmembrane domain 272 601 IPR036640 GO:0005524|GO:0016021
Mtr6g0936 1473 Gene3D ABC transporter type 1, transmembrane domain 875 1209 IPR036640 GO:0005524|GO:0016021
Mtr6g0936 1473 SMART AAA_5 1253 1445 IPR003593 -
Mtr6g0936 1473 SMART AAA_5 646 819 IPR003593 -
Mtr6g0936 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1216 1460 IPR027417 -
Mtr6g0936 1473 CDD ABCC_MRP_domain1 619 818 - -
Mtr6g0936 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 621 842 IPR003439 GO:0005524
Mtr6g0936 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1227 1461 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0936 Mtr-Chr6 12211879 12220069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0936 613 1468 Calmodulin-binding Proteins AT2G36910 24.761 3.01e-57 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0936 K05666 - gmx:100787314 2218.74