Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0935 ATGGAAAACTTTTGGAGCATGATTTGTGGAGACTGTGGTAATGTTGATAATGAAGGAAAACCTTTCTGTTATGATTTAGCACTTTTGAAAGATCCTTCTTCATGCATCAACCATGTGTTGGTCTTTTCATTTGATGTGATAGTCCTTACCATGTTGATATTTATCATGATCCTGAAGTCTTCCTCGAGACCTTTTCGAAGTCTAGTACGATATTCAAACTTGCAGTTAGTTTCTGCCATAATCAATGGCTTTCTAGGGTTGTTGCATTTATCCTTAGGAGTTTGGATTTTAGAGGAGAAGTTAAGGAAAAACCATGAAGTCTTTCCTCTTAATTGGTGGTTGCTAGAACTCTTTCATGGACTCACATGGTTGTCGATAAGTTTATCTATAAGTCTTCGGATAAAACAACTCTCAAGAGCATGGTTGTGGATGTTTTCTGTTCTCGTATTCTTTGTTTCCGGTATATTATGTGCTTTATCGATATCTTATGCAATTGGAAGCAAAGAATTGTCACTCAAGGTAGGTTTAGATGTTATATCATTTGTAGGAGCAATTTTGTTGCTTTTATGCACATACCAAACATGTAAACGCAAAGATGTTGAAACGGAAATCGATGATAGTCTTCGTGCGCCTTTAATAGGCCAATTCGATGAAATTAATCCTGTTAGCCATGTTACTCCATTTGGCAATGCTGGATTCTTGAGTAAGATTTGGTTTTGGTGGTTAAATACATTGATGAAAACAGGTCAAACGAAAACACTTCAAGATGAGGATATCCCGAAATTAAGAGAGTCTGACCGAGCAGAAATTTGTTATTCGTCATTTCTGGAACAGTTAAACAAACAAAGACAATGTGAGTCGTCATATCAATCATCGGTTTTATGGACCATCTTTTTGTGCCATTGGAGAGAGATTTTGGTAACCGGATTCTTTGCGTTGTTTAAGGTACTCGCTCTATCTTCTACTCCTCTACTTCTTAATGCCTTCATATTGGTTGCCGAGGGTAACGAAAGTTTCAAATATGAAGGTTATGTATTGGCCGTTTCACTCTTTGTTATAAAAATCATAGAATCCCTATCACAAAGACAATGGTATTTCCACACTAGACTTGTTGGGATGAAAGTTAGATCACTACTTAATGCAGCCATTTATAAGAAAATATTACGGCTATCGAATTCTGCTAGGTTGATTCACTCTGGTGGTGAGATAATGAATTACATGATCGTAGATGCTTATAGAATCGGAGAATTTCCATTCTGGTTTCACCAGACATGGACAACAATTCTCCAATTGTGTATTGCATTAGTAATTCTTTTCCGCACAATTGGACTAGCAACGCTTGCATCATTGGCGGTGATAGTTCTCACTGTGATTTGCAATTATCCACTAGCAAAGTTACAACACAAGTATCAGAGCAAACTTATGGTGGCACAAGATGAGAGATTAAAGGCTAGTTCGGAGGCTCTTGTGAATATGAAAGTGTTGAAGTTGTATGCGTGGGAAAATCATTTTAAAAATGTTGTCGATTTTTTAAGAAATGCGGAACTGAAAATGTTATATGCAGTGCAATTAAGACGAACATATAACGTCTTTCTCTTTTGGACCTCGCCGATGTTGGTGTCTACTGCTTCTTTTCTAGCATGTTACTTCTTGGATATTCCTTTACATGCAAGTAATGTTTTCACTTTTGTGGCAACTGTGCGCCTTGTTCAAGAGCCAATTACAAGTATTCCAGATGTCATTGCGGTGATCATTCAGGCAAAAGTTGCATTTGCTCGAATTGTTACTTTCCTTGATGCACCAGAACTGCAGAGTGAAAATTTGAAGAACGAGTGCTTTGATGACAACCTCAAAGGATCAATTTCAATAAAATCTGCTAACTTTTCATGGGAAGGTAATGCATCAAAGCCAACCCTGCGGAACATAAATTTAGAGGTTAAGCACGGCCAAAAAGTGGCTATCTGTGGAGAAGTTGGCTCCGGCAAATCAACCCTCTTAGCAACAATTCTTGGAGAAGTTACCAAAATAAAAGGAATCGTTGATGTTTACGGGAGGTTTGCATATGTTTCTCAAACACCATGGATACAAACAGGTACAATACGGGAAAACATTTTGTTTGGATCTGAATTGGATGATCAAAGATATCAAGAAACACTTCAAAGGTCTTCATTGAAAAAGGACTTTGAGTTGCTTCCCTATGGCGACCTCACTGAAATAGGTGAAAGAGGAGTTAATTTAAGTGGAGGTCAAAAACAGCGAATTCAACTAGCTCGTGCTCTTTATCAGAATGCTGACATATATCTATTGGATGATCCATTTAGCGCTGTTGATGCACATACTGCAAAAAATTTGTTTGATGAATATATCATGGAAGGACTCAAAGGGAAAACAGTCTTACTTGTGACTCATCAAGTCGACTTCCTCCCTGCGTTTGATTCTGTTTTGTTGATGTCAGAGGGGGTAATCCAGCAAGCTGGTCCATATCACCAGCTATTAACCTCAAGCCAAGAATTCCAGGACCTCGTCAATGCTCACAAGGAGACTGCTGGTTCTAACGAGCTTGTGGATGTTACTTTTTCTCAGAGACATTCATCTTCAAGAAAGGCTACACAAGATTCCGTGGAACAGCAGTTTAAAGAAACCAATGGAAATCAATTAATTAAGCAAGAAGAAAGAGAGAAAGGAGACGCAGGGTTGAAGCCTTACTTACAATATTTGAATGAGATGAGAGGCTACATATTCTTCTCATTGGCATCCCTTTGTCACCTTCTCTTCGTTGTTTGTCAGATATTGCAAAACTCGTGGATGGCTGCTAAAGTTGACGACCCCCTCATCAGCACATTGAAATTGATTTTAGTTTATTTCCTAATTGGTTCTTTTTCAGTAGTTTTCTTGTTCACTAGAAGTCTACTTGTAGTTTCTTTGGGTCATCAATCATCAAAAAATTTATTTTCACAGTTGATGAACTCCCTCTTTCGTGCACCGATGTCATTTTACGATTCTACACCATTGGGAAGGATACTTAGTAGGGTCTCATCTGATCTGAGCATTATGGATCTCGACCTTCCATTTAGCCTCACGTTTGCAATGGGAGGCACAATCGTTTTTTGTTCTAGTCTGACAGTTTTGGCAGTCGTCTCATGGCAAGTCTTGATTGTGGCTATACCAATGGTTTGTGTTGCAATTCGCATGCAGAGATACTACTTTGCCTTGGCAAAAGAACTAATGCGGATGAATGGCACAACAAAATCATCATTAGCTAATCATGTAGCTGAAACTGTTGCCGGAGCTGCAACAATTAGGGCTTTTGAGGAGGAAGATCGTTCTTTTGAGAAGAACCTTGATCTAATTGATAATAATGCAAGTGCTTTTTTCCATAGTTTTGCCTCGAATGAGTGGTTGATCCAACGGTTAGAAACAATCAGTGCAGTTCTTCTCACTGCTGCAGCACTTTGCATGGTTATGCTTCCCCCTGGAACATTCACCTCAGGAATTATCGGCATGGCTCTATCTTATGGCCTTTCATTAAACAATTCCTTAGTATTTTCAATTCAAAATCAATGCACTGTTGCTAATCACATAATATCAGTAGAGAGGCTAAAACAATACATGCATATAGAAAGTGAGGCGAAAGAAATAGTAGAAGAAAACCGTCCTCCTTCGTATTGGCCAGTTGCCGGCAAAGTAGAAATAAATAATTTGAAGATACGATACAGGTCTAATGGACCACTTGTACTTCATGGGATCACATGCACATTTGAAGCAGGGCATAAGATTGGTATCGTCGGAAGAACAGGCAGTGGGAAATCCACTCTTATCAGTGCTTTATTTCGTCTTGTGGAACCAGCAGGAGGCAAAATTATAGTTGATGGAATAGACATATCATCTATTGGTCTTCATGATTTGAGGTCACGTTTTGGTATTATACCTCAGGATCCTACCCTTTTTAATGGGACAGTAAGATATAATTTGGACCCTTTATCTCAACACACTGATCAAGAAATATGGGAGGTTCTCGGGAAGTGTCAGTTGCGAGAAGTTGTCCAAGGGAAAGAAGAGGGTTTAAACTCGTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCGCTTTTGAGGAGAAGTCGAATATTGGTGTTGGATGAAGCAACTGCTTCGATTGATAATTCTACTGATCTTATTCTCCAGAAAACCATTAGGGCTGAGTTTGCAGATTGTACAGTGATCACAGTGGCACATAGGATACCAACTGTGATGGATTGCAGTATGGTTCTTGCCATAAGTGATGGAAAATTGGCGGAGTATGACGAGCCAAAGAACTTGATGAAGAGAGAAGAATCGTTGTTCAGGAAGCTTGTCAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCGCATTGA 4428 0.3914 MENFWSMICGDCGNVDNEGKPFCYDLALLKDPSSCINHVLVFSFDVIVLTMLIFIMILKSSSRPFRSLVRYSNLQLVSAIINGFLGLLHLSLGVWILEEKLRKNHEVFPLNWWLLELFHGLTWLSISLSISLRIKQLSRAWLWMFSVLVFFVSGILCALSISYAIGSKELSLKVGLDVISFVGAILLLLCTYQTCKRKDVETEIDDSLRAPLIGQFDEINPVSHVTPFGNAGFLSKIWFWWLNTLMKTGQTKTLQDEDIPKLRESDRAEICYSSFLEQLNKQRQCESSYQSSVLWTIFLCHWREILVTGFFALFKVLALSSTPLLLNAFILVAEGNESFKYEGYVLAVSLFVIKIIESLSQRQWYFHTRLVGMKVRSLLNAAIYKKILRLSNSARLIHSGGEIMNYMIVDAYRIGEFPFWFHQTWTTILQLCIALVILFRTIGLATLASLAVIVLTVICNYPLAKLQHKYQSKLMVAQDERLKASSEALVNMKVLKLYAWENHFKNVVDFLRNAELKMLYAVQLRRTYNVFLFWTSPMLVSTASFLACYFLDIPLHASNVFTFVATVRLVQEPITSIPDVIAVIIQAKVAFARIVTFLDAPELQSENLKNECFDDNLKGSISIKSANFSWEGNASKPTLRNINLEVKHGQKVAICGEVGSGKSTLLATILGEVTKIKGIVDVYGRFAYVSQTPWIQTGTIRENILFGSELDDQRYQETLQRSSLKKDFELLPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKNLFDEYIMEGLKGKTVLLVTHQVDFLPAFDSVLLMSEGVIQQAGPYHQLLTSSQEFQDLVNAHKETAGSNELVDVTFSQRHSSSRKATQDSVEQQFKETNGNQLIKQEEREKGDAGLKPYLQYLNEMRGYIFFSLASLCHLLFVVCQILQNSWMAAKVDDPLISTLKLILVYFLIGSFSVVFLFTRSLLVVSLGHQSSKNLFSQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIMDLDLPFSLTFAMGGTIVFCSSLTVLAVVSWQVLIVAIPMVCVAIRMQRYYFALAKELMRMNGTTKSSLANHVAETVAGAATIRAFEEEDRSFEKNLDLIDNNASAFFHSFASNEWLIQRLETISAVLLTAAALCMVMLPPGTFTSGIIGMALSYGLSLNNSLVFSIQNQCTVANHIISVERLKQYMHIESEAKEIVEENRPPSYWPVAGKVEINNLKIRYRSNGPLVLHGITCTFEAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHTDQEIWEVLGKCQLREVVQGKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLILQKTIRAEFADCTVITVAHRIPTVMDCSMVLAISDGKLAEYDEPKNLMKREESLFRKLVKEYWSHFQSAESH* 1476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0935 1475 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 844 IPR003439 GO:0005524
Mtr6g0935 1475 SMART AAA_5 648 821 IPR003593 -
Mtr6g0935 1475 SMART AAA_5 1255 1447 IPR003593 -
Mtr6g0935 1475 Pfam ABC transporter transmembrane region 306 564 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0935 1475 Pfam ABC transporter transmembrane region 930 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0935 1475 CDD ABC_6TM_ABCC_D2 911 1204 IPR044726 GO:0140359
Mtr6g0935 1475 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1229 1463 IPR003439 GO:0005524
Mtr6g0935 1475 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 917 1192 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0935 1475 SUPERFAMILY ABC transporter transmembrane region 294 601 IPR036640 GO:0005524|GO:0016021
Mtr6g0935 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 844 IPR027417 -
Mtr6g0935 1475 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 586 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0935 1475 ProSitePatterns ABC transporters family signature. 746 760 IPR017871 GO:0005524
Mtr6g0935 1475 CDD ABCC_MRP_domain1 621 820 - -
Mtr6g0935 1475 CDD ABC_6TM_ABCC_D1 307 594 IPR044746 GO:0140359
Mtr6g0935 1475 SUPERFAMILY ABC transporter transmembrane region 902 1209 IPR036640 GO:0005524|GO:0016021
Mtr6g0935 1475 Gene3D - 1212 1464 IPR027417 -
Mtr6g0935 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1218 1462 IPR027417 -
Mtr6g0935 1475 CDD ABCC_MRP_domain2 1227 1447 - -
Mtr6g0935 1475 Pfam ABC transporter 639 773 IPR003439 GO:0005524
Mtr6g0935 1475 Pfam ABC transporter 1246 1394 IPR003439 GO:0005524
Mtr6g0935 1475 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 67 1475 - -
Mtr6g0935 1475 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 67 1475 - -
Mtr6g0935 1475 Gene3D ABC transporter type 1, transmembrane domain 876 1211 IPR036640 GO:0005524|GO:0016021
Mtr6g0935 1475 Gene3D - 596 867 IPR027417 -
Mtr6g0935 1475 Gene3D ABC transporter type 1, transmembrane domain 293 595 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0935 Mtr-Chr6 12179839 12186894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0935 615 874 Calmodulin-binding Proteins AT2G36910 31.900 1.21e-27 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0935 K05666 - gmx:100787314 2239.54