Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0934 ATGGAAAACTTTTGGAGCATGATTTGTGGAGACTGTGGTAATGTTGATAATGAAGGAAAACCTTTCTGTTATGATTTAGCACTTTTGAAAGATCCTTCTTCATGCATCAACCATGTGTTGGTCATTTCATTTGATGTGATAGTCCTTACCATGTTGATATTTATCATGATCCTGAAGTCTTCCTCGAGACCTTTTCGAAGTCTAGTACGATATTCAAACTTGCAGTTAGTTTCTGCCATAACCAATGGCTTTCTAGGTTTGTTGCATTTATCCTTAGGAGTTTGGATTTTAGAGGAGAAGTTAAGGAAAAACCATGAAGTCTTCCCTCTTAATTGGTGGTTGCTAGAACTCTTTCATGGTTTAACATGGTTGTCGATAAGTTTATCTGTCAGCCTTCAGATGAAACAACTTACAAGAGCATGGTTGTGGATGTTTTCTGCTCTCATGCTCTTTGTTTCTTTTATATTATGTGTTTTATCCGTGTCTTATGCGATTGGGAGCACCGAACTGTCCCTCGAGGCAGCTTTAGATGTTCTATCTTTTCTAGGAGCAACTTTGCTGTTGTTATGCACATACAAAGCATGTACATGTGAAGTCGATCCTGTAAATGGTGAAAGCCTTTATGCTCCTTTAAATGGCCAGTTCAATGAAGTTGATCCTGCTAGCAATGTAACCCCTTTTTCCAATGCTGGATTCTTTAGAAAGACTTCGTTTTGGTGGTTGAATCCATTGATGAAAACGGGTCTAGAGAAAACACTTCTAGACGATGATATCCCAAAGTTAAGAGTGTTTGACCGAGCAGAAAGTTGTTATTTTTCATTTGTTGAACAGTTAAACAAACAAAAACAACATGAACCATCATCACATTTGTCGGTTTTATGGACAATAATTTTGTGCCACAAGAGAGAGATTTTGATAACAGGATTCTTCGCTTTTCTCAAGGTACTCACACTATCTTCTGGTCCTATGATTCTGAATGAATTTATATTGGTTGCTGAAGGTAATGAAAGTTTCAAATATGAAGGTTATTTATTAGCCATATCAATCTTCCTTGTAAAGATCATAGAATCTATATCTCAAAGACAATGGTATTTCCGCAGTAGACTTGTTGGAGTGAAAATTCGATCTTTACTTACTGCAGCCACTTATAAAAAAATGTTAAGTCTATCAAATTCGGCTAGATTGAATCACTCTGGTGGTGAGATAATGAATTATGTTACTGTCGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCACCAGACTTGGACAACAAGCCTCCAATTGTGTATTGCATTGATAATTCTTTTCCGCACAATTGGACTAGCAACACTCGCATCATTGGTGGTGATAGTTCTCACTGTGCTTTGCAACGCTCCACTAGCAAACTTACAACACAAGTTTCAAACCCAACTTATGGTGGCGCAAGATGAGAGATTAAAGGCGAGTTCGGAGGCTCTTGTGAATATGAAAGTGTTGAAGCTATATGCATGGGAAACACATTTTAAAAATGTTGTAGATAATTTAAGAAATGTCGAACTCAATTTTTTATCTCCGGTGCAATTAAGAAGAACATACCATATATTTATCTTTATGACATCCCTGATGTTGGCGTCAACAGCATCTTTTTTTGCATGCTACTTCTTGAAGATTCCTCTGAATGCAAGTAATGTTTTCACATTGGTCGCAACTTTGCGCCTTGTTCAAGATCCAATTGCAAACATCCCAGAAGTTATTGCAGCGATCATTCAGGCGAAAGTTGCATTTGCTCGGATTGTTAATTTCCTTGAGGCACCAGAACTGCAGAGTGAAAATTTTAGGAACAGGTGCTTTAAAGATGACCTCAAAGACACAATTTCAATAAAATGTGCCGACTTTTCATGGGAAGGTAACTCGTCAAAGCCATCACTAAGGAACATAAATTTAGATGTTAGACATGGGCAAAAGGTGGCCATTTGTGGAGAAGTTGGTTCCGGAAAATCAACCATCTTAGCAACAATTCTTGGAGAAGTTTCTAAAACAAAGGGAACTATTGATGTTCATGGGAAGTTTGGATATGTTTCTCAAACAGCATGGATACAAACAGGCACGATACGTGAAAATATTTTGTTTGGATCTGAGTTGGATGATCAAAGATATCAAGAAACACTTCAGAGGTCTTCACTGGAAAAGGACCTTGAGTTGTTTCCCTATGGAGACCTCACTGAAATAGGCGAGAGAGGAGTTAATTTAAGCGGAGGTCAAAAGCAACGAATTCAACTTGCTCGCGCTCTTTATAAGAATGCTGATATATATCTTTTGGATGATCCATTTAGTGCCGTTGATGCACATACTGCAAAAAATTTGTTAAATGAATACATCATGGAAGGACTGAAAGGGAAAACTGTCTTACTCGTGACTCATCAAGTCGATTTCCTCCCCGCGTTTGATAATATATTGTTAATGTCTAATGGAGCAATACTACAAGCTGGTTCATATCAACAGCTATTGAGCTCAAGCCAAGAATTCCATAACCTTGTCAATGCTCACAAGGAGACTGCTGGTTCTAACCAACTTGTGAGTGTTACTTCTTCCGAGAGACATTCAACTTCCGGAAAGAGTACGCTGGATCGCGTGTTGAAAGAATTTATACCCCCAAGTGGAAATCAATTAATTCAGGAAGAAGAAAGAGAGATAGGAAATACAGGATTGAAGCCTTACTTACAATATCTAAATCGGACGAAAGGCTATATATTATTCTCTGTGGCTTCCCTTTGTTTCCTTTTTTCTGTGGTTTGTCAGATACTGCAAAACTCATGGATGGCTGCTAAAGTTGACGATCCCCTCGTCAGCACATTGCAATTGATTTTAGTTTATTTCGTTATTGGTGTTTTTTCAATAATTTTCTTGTTCATCAGATGTCTACTTGTAGTTGCTTTAGGTCTTCAATCGTCAAAAGATTTATTTTCACAGTTGATGAACTCCCTCTTCCGTGCACCCATGTCATTTTACGACTCTACACCATTAGGAAGAGTCCTTACTAGGGTCTCATCTGATCTTAGTATTATGGATATTGACATTCCATTTATCCTCAGTTTTGCCGTGGGGGGCACTATAGTTCTCTATTCTAATCTTATAGTTTTGGCTGTTGTCACATGGAAAGTCTTGATTGTGGCTATACCAATGGTTTATGTTGCATTTCGCTTGCAGAGATACTACTTTGCCTCAGCAAAAGAACTAATGCGGTTGAATGGCACAACAAAATCCTCTTTAGCGAATCATGTAGCCGAAACTGTTGCTGGAGCTGTAACAATAAGGGCTTTTGAGGGGGAAGATCGTTCTTTTGAGAAGAACCTTGATCTAATTGATAATAATGCAAGTGCTTTTTTTCATAGTTTTGCCTCAAACGAATGGTTGATCCAACGATTAGAAACACTCAGTGCAGTTGTTCTCGCCGCTGCAACACTTTGCATGGTTATGCTTCCTCCCGGAACATTCCCCTCAGGAATTATTGGCATGGCTCTAACTTATGGCCTATCACTAAACGGTGCCTTAATATTTGCAATTCAAAATCAATGCACTCTTGCTAATCACATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGCGAGGCCGAAGAAATTATAGAAGGAAATCGTCCTCCTTTGAATTGGCCAGTTGCTGGAGAAGTAGAAATAAATAACTTGAAGATACGATATAGACATGGCGGACCACTTGTACTTCATGGCATCACATGTACATTTAAAGCAGGTCACAAGATTGGTATTGTTGGCAGAACAGGCAGTGGGAAGTCCACTCTTATCGGTGCTTTATTTCGCCTTGTGGAACCAGCAGGTGGAAAAATTGTAGTTGATGGCATAGATATCTCATCTATTGGCCTACATGATTTGAGGTCACGTTTTGGTATTATACCTCAAGATCCTACACTTTTTAACGGGACAGTAAGATTTAACTTGGACCCTTTATCTCAACACACCGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAATTGCGAGAAGTCGTCCAAGAGAAAGAAGAGGGTTTAGATTCATCAGGTACATTTTCAAGTCTCATTGTCATAGCTACGTTAGAAGTTCATTGTGTTTCCAAGTTAGTATTAACTAGTGAAGATTGTTACGCAGTTGTTGAGGATGGATCAAACTGGAGCATGGGACAACGACAGTTATTCTGTTTGGGACGTGCTCTTTTGAGAAGAAGTAAGATTTTGGTATTGGACGAAGCAACTGCGTCAATTGATAATTCTACTGATCTGATTGTGCAGAAAACCATTAGGGCTGAGTTCGCAGATTGTACAGTAATCACTGTCGCACACAGAATACCAACTGTGATGGATTGCAATATGGTTCTTGCTATAAGTGATGGAAAATTGGCGGAGTACGACGAACCAACGAGCTTGATGAAGAGGGAAAACTCGATGTTCAGGCAGCTTGTCAAAGAATACTGGTCTCATTTTCAGTCCACAGAATCGCATTGA 4512 0.3879 MENFWSMICGDCGNVDNEGKPFCYDLALLKDPSSCINHVLVISFDVIVLTMLIFIMILKSSSRPFRSLVRYSNLQLVSAITNGFLGLLHLSLGVWILEEKLRKNHEVFPLNWWLLELFHGLTWLSISLSVSLQMKQLTRAWLWMFSALMLFVSFILCVLSVSYAIGSTELSLEAALDVLSFLGATLLLLCTYKACTCEVDPVNGESLYAPLNGQFNEVDPASNVTPFSNAGFFRKTSFWWLNPLMKTGLEKTLLDDDIPKLRVFDRAESCYFSFVEQLNKQKQHEPSSHLSVLWTIILCHKREILITGFFAFLKVLTLSSGPMILNEFILVAEGNESFKYEGYLLAISIFLVKIIESISQRQWYFRSRLVGVKIRSLLTAATYKKMLSLSNSARLNHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCIALIILFRTIGLATLASLVVIVLTVLCNAPLANLQHKFQTQLMVAQDERLKASSEALVNMKVLKLYAWETHFKNVVDNLRNVELNFLSPVQLRRTYHIFIFMTSLMLASTASFFACYFLKIPLNASNVFTLVATLRLVQDPIANIPEVIAAIIQAKVAFARIVNFLEAPELQSENFRNRCFKDDLKDTISIKCADFSWEGNSSKPSLRNINLDVRHGQKVAICGEVGSGKSTILATILGEVSKTKGTIDVHGKFGYVSQTAWIQTGTIRENILFGSELDDQRYQETLQRSSLEKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYKNADIYLLDDPFSAVDAHTAKNLLNEYIMEGLKGKTVLLVTHQVDFLPAFDNILLMSNGAILQAGSYQQLLSSSQEFHNLVNAHKETAGSNQLVSVTSSERHSTSGKSTLDRVLKEFIPPSGNQLIQEEEREIGNTGLKPYLQYLNRTKGYILFSVASLCFLFSVVCQILQNSWMAAKVDDPLVSTLQLILVYFVIGVFSIIFLFIRCLLVVALGLQSSKDLFSQLMNSLFRAPMSFYDSTPLGRVLTRVSSDLSIMDIDIPFILSFAVGGTIVLYSNLIVLAVVTWKVLIVAIPMVYVAFRLQRYYFASAKELMRLNGTTKSSLANHVAETVAGAVTIRAFEGEDRSFEKNLDLIDNNASAFFHSFASNEWLIQRLETLSAVVLAAATLCMVMLPPGTFPSGIIGMALTYGLSLNGALIFAIQNQCTLANHIISVERLNQYMHIQSEAEEIIEGNRPPLNWPVAGEVEINNLKIRYRHGGPLVLHGITCTFKAGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIVVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRFNLDPLSQHTDQEIWEVLGKCQLREVVQEKEEGLDSSGTFSSLIVIATLEVHCVSKLVLTSEDCYAVVEDGSNWSMGQRQLFCLGRALLRRSKILVLDEATASIDNSTDLIVQKTIRAEFADCTVITVAHRIPTVMDCNMVLAISDGKLAEYDEPTSLMKRENSMFRQLVKEYWSHFQSTESH* 1504
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0934 1503 Gene3D ABC transporter type 1, transmembrane domain 880 1210 IPR036640 GO:0005524|GO:0016021
Mtr6g0934 1503 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 1385 1503 - -
Mtr6g0934 1503 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 69 1356 - -
Mtr6g0934 1503 SUPERFAMILY ABC transporter transmembrane region 902 1210 IPR036640 GO:0005524|GO:0016021
Mtr6g0934 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 916 1191 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0934 1503 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 69 1356 - -
Mtr6g0934 1503 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1385 1503 - -
Mtr6g0934 1503 CDD ABCC_MRP_domain1 620 819 - -
Mtr6g0934 1503 Gene3D ABC transporter type 1, transmembrane domain 290 596 IPR036640 GO:0005524|GO:0016021
Mtr6g0934 1503 ProSitePatterns ABC transporters family signature. 745 759 IPR017871 GO:0005524
Mtr6g0934 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 843 IPR027417 -
Mtr6g0934 1503 SMART AAA_5 647 820 IPR003593 -
Mtr6g0934 1503 SMART AAA_5 1254 1475 IPR003593 -
Mtr6g0934 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 305 585 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0934 1503 Gene3D - 1212 1493 IPR027417 -
Mtr6g0934 1503 Pfam ABC transporter transmembrane region 305 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0934 1503 Pfam ABC transporter transmembrane region 919 1171 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0934 1503 Pfam ABC transporter 638 772 IPR003439 GO:0005524
Mtr6g0934 1503 Pfam ABC transporter 1245 1422 IPR003439 GO:0005524
Mtr6g0934 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 622 843 IPR003439 GO:0005524
Mtr6g0934 1503 SUPERFAMILY ABC transporter transmembrane region 293 598 IPR036640 GO:0005524|GO:0016021
Mtr6g0934 1503 CDD ABCC_MRP_domain2 1226 1475 - -
Mtr6g0934 1503 CDD ABC_6TM_ABCC_D1 306 593 IPR044746 GO:0140359
Mtr6g0934 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1228 1491 IPR003439 GO:0005524
Mtr6g0934 1503 Gene3D - 597 861 IPR027417 -
Mtr6g0934 1503 CDD ABC_6TM_ABCC_D2 910 1203 IPR044726 GO:0140359
Mtr6g0934 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1218 1491 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr6g0934 Mtr-Chr6 12166706 12175185 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0934 614 877 Calmodulin-binding Proteins AT2G36910 30.847 6.43e-28 121
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0934 K05666 - gmx:100787314 2224.9