Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr6g0934 | ATGGAAAACTTTTGGAGCATGATTTGTGGAGACTGTGGTAATGTTGATAATGAAGGAAAACCTTTCTGTTATGATTTAGCACTTTTGAAAGATCCTTCTTCATGCATCAACCATGTGTTGGTCATTTCATTTGATGTGATAGTCCTTACCATGTTGATATTTATCATGATCCTGAAGTCTTCCTCGAGACCTTTTCGAAGTCTAGTACGATATTCAAACTTGCAGTTAGTTTCTGCCATAACCAATGGCTTTCTAGGTTTGTTGCATTTATCCTTAGGAGTTTGGATTTTAGAGGAGAAGTTAAGGAAAAACCATGAAGTCTTCCCTCTTAATTGGTGGTTGCTAGAACTCTTTCATGGTTTAACATGGTTGTCGATAAGTTTATCTGTCAGCCTTCAGATGAAACAACTTACAAGAGCATGGTTGTGGATGTTTTCTGCTCTCATGCTCTTTGTTTCTTTTATATTATGTGTTTTATCCGTGTCTTATGCGATTGGGAGCACCGAACTGTCCCTCGAGGCAGCTTTAGATGTTCTATCTTTTCTAGGAGCAACTTTGCTGTTGTTATGCACATACAAAGCATGTACATGTGAAGTCGATCCTGTAAATGGTGAAAGCCTTTATGCTCCTTTAAATGGCCAGTTCAATGAAGTTGATCCTGCTAGCAATGTAACCCCTTTTTCCAATGCTGGATTCTTTAGAAAGACTTCGTTTTGGTGGTTGAATCCATTGATGAAAACGGGTCTAGAGAAAACACTTCTAGACGATGATATCCCAAAGTTAAGAGTGTTTGACCGAGCAGAAAGTTGTTATTTTTCATTTGTTGAACAGTTAAACAAACAAAAACAACATGAACCATCATCACATTTGTCGGTTTTATGGACAATAATTTTGTGCCACAAGAGAGAGATTTTGATAACAGGATTCTTCGCTTTTCTCAAGGTACTCACACTATCTTCTGGTCCTATGATTCTGAATGAATTTATATTGGTTGCTGAAGGTAATGAAAGTTTCAAATATGAAGGTTATTTATTAGCCATATCAATCTTCCTTGTAAAGATCATAGAATCTATATCTCAAAGACAATGGTATTTCCGCAGTAGACTTGTTGGAGTGAAAATTCGATCTTTACTTACTGCAGCCACTTATAAAAAAATGTTAAGTCTATCAAATTCGGCTAGATTGAATCACTCTGGTGGTGAGATAATGAATTATGTTACTGTCGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCACCAGACTTGGACAACAAGCCTCCAATTGTGTATTGCATTGATAATTCTTTTCCGCACAATTGGACTAGCAACACTCGCATCATTGGTGGTGATAGTTCTCACTGTGCTTTGCAACGCTCCACTAGCAAACTTACAACACAAGTTTCAAACCCAACTTATGGTGGCGCAAGATGAGAGATTAAAGGCGAGTTCGGAGGCTCTTGTGAATATGAAAGTGTTGAAGCTATATGCATGGGAAACACATTTTAAAAATGTTGTAGATAATTTAAGAAATGTCGAACTCAATTTTTTATCTCCGGTGCAATTAAGAAGAACATACCATATATTTATCTTTATGACATCCCTGATGTTGGCGTCAACAGCATCTTTTTTTGCATGCTACTTCTTGAAGATTCCTCTGAATGCAAGTAATGTTTTCACATTGGTCGCAACTTTGCGCCTTGTTCAAGATCCAATTGCAAACATCCCAGAAGTTATTGCAGCGATCATTCAGGCGAAAGTTGCATTTGCTCGGATTGTTAATTTCCTTGAGGCACCAGAACTGCAGAGTGAAAATTTTAGGAACAGGTGCTTTAAAGATGACCTCAAAGACACAATTTCAATAAAATGTGCCGACTTTTCATGGGAAGGTAACTCGTCAAAGCCATCACTAAGGAACATAAATTTAGATGTTAGACATGGGCAAAAGGTGGCCATTTGTGGAGAAGTTGGTTCCGGAAAATCAACCATCTTAGCAACAATTCTTGGAGAAGTTTCTAAAACAAAGGGAACTATTGATGTTCATGGGAAGTTTGGATATGTTTCTCAAACAGCATGGATACAAACAGGCACGATACGTGAAAATATTTTGTTTGGATCTGAGTTGGATGATCAAAGATATCAAGAAACACTTCAGAGGTCTTCACTGGAAAAGGACCTTGAGTTGTTTCCCTATGGAGACCTCACTGAAATAGGCGAGAGAGGAGTTAATTTAAGCGGAGGTCAAAAGCAACGAATTCAACTTGCTCGCGCTCTTTATAAGAATGCTGATATATATCTTTTGGATGATCCATTTAGTGCCGTTGATGCACATACTGCAAAAAATTTGTTAAATGAATACATCATGGAAGGACTGAAAGGGAAAACTGTCTTACTCGTGACTCATCAAGTCGATTTCCTCCCCGCGTTTGATAATATATTGTTAATGTCTAATGGAGCAATACTACAAGCTGGTTCATATCAACAGCTATTGAGCTCAAGCCAAGAATTCCATAACCTTGTCAATGCTCACAAGGAGACTGCTGGTTCTAACCAACTTGTGAGTGTTACTTCTTCCGAGAGACATTCAACTTCCGGAAAGAGTACGCTGGATCGCGTGTTGAAAGAATTTATACCCCCAAGTGGAAATCAATTAATTCAGGAAGAAGAAAGAGAGATAGGAAATACAGGATTGAAGCCTTACTTACAATATCTAAATCGGACGAAAGGCTATATATTATTCTCTGTGGCTTCCCTTTGTTTCCTTTTTTCTGTGGTTTGTCAGATACTGCAAAACTCATGGATGGCTGCTAAAGTTGACGATCCCCTCGTCAGCACATTGCAATTGATTTTAGTTTATTTCGTTATTGGTGTTTTTTCAATAATTTTCTTGTTCATCAGATGTCTACTTGTAGTTGCTTTAGGTCTTCAATCGTCAAAAGATTTATTTTCACAGTTGATGAACTCCCTCTTCCGTGCACCCATGTCATTTTACGACTCTACACCATTAGGAAGAGTCCTTACTAGGGTCTCATCTGATCTTAGTATTATGGATATTGACATTCCATTTATCCTCAGTTTTGCCGTGGGGGGCACTATAGTTCTCTATTCTAATCTTATAGTTTTGGCTGTTGTCACATGGAAAGTCTTGATTGTGGCTATACCAATGGTTTATGTTGCATTTCGCTTGCAGAGATACTACTTTGCCTCAGCAAAAGAACTAATGCGGTTGAATGGCACAACAAAATCCTCTTTAGCGAATCATGTAGCCGAAACTGTTGCTGGAGCTGTAACAATAAGGGCTTTTGAGGGGGAAGATCGTTCTTTTGAGAAGAACCTTGATCTAATTGATAATAATGCAAGTGCTTTTTTTCATAGTTTTGCCTCAAACGAATGGTTGATCCAACGATTAGAAACACTCAGTGCAGTTGTTCTCGCCGCTGCAACACTTTGCATGGTTATGCTTCCTCCCGGAACATTCCCCTCAGGAATTATTGGCATGGCTCTAACTTATGGCCTATCACTAAACGGTGCCTTAATATTTGCAATTCAAAATCAATGCACTCTTGCTAATCACATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGCGAGGCCGAAGAAATTATAGAAGGAAATCGTCCTCCTTTGAATTGGCCAGTTGCTGGAGAAGTAGAAATAAATAACTTGAAGATACGATATAGACATGGCGGACCACTTGTACTTCATGGCATCACATGTACATTTAAAGCAGGTCACAAGATTGGTATTGTTGGCAGAACAGGCAGTGGGAAGTCCACTCTTATCGGTGCTTTATTTCGCCTTGTGGAACCAGCAGGTGGAAAAATTGTAGTTGATGGCATAGATATCTCATCTATTGGCCTACATGATTTGAGGTCACGTTTTGGTATTATACCTCAAGATCCTACACTTTTTAACGGGACAGTAAGATTTAACTTGGACCCTTTATCTCAACACACCGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAATTGCGAGAAGTCGTCCAAGAGAAAGAAGAGGGTTTAGATTCATCAGGTACATTTTCAAGTCTCATTGTCATAGCTACGTTAGAAGTTCATTGTGTTTCCAAGTTAGTATTAACTAGTGAAGATTGTTACGCAGTTGTTGAGGATGGATCAAACTGGAGCATGGGACAACGACAGTTATTCTGTTTGGGACGTGCTCTTTTGAGAAGAAGTAAGATTTTGGTATTGGACGAAGCAACTGCGTCAATTGATAATTCTACTGATCTGATTGTGCAGAAAACCATTAGGGCTGAGTTCGCAGATTGTACAGTAATCACTGTCGCACACAGAATACCAACTGTGATGGATTGCAATATGGTTCTTGCTATAAGTGATGGAAAATTGGCGGAGTACGACGAACCAACGAGCTTGATGAAGAGGGAAAACTCGATGTTCAGGCAGCTTGTCAAAGAATACTGGTCTCATTTTCAGTCCACAGAATCGCATTGA | 4512 | 0.3879 | MENFWSMICGDCGNVDNEGKPFCYDLALLKDPSSCINHVLVISFDVIVLTMLIFIMILKSSSRPFRSLVRYSNLQLVSAITNGFLGLLHLSLGVWILEEKLRKNHEVFPLNWWLLELFHGLTWLSISLSVSLQMKQLTRAWLWMFSALMLFVSFILCVLSVSYAIGSTELSLEAALDVLSFLGATLLLLCTYKACTCEVDPVNGESLYAPLNGQFNEVDPASNVTPFSNAGFFRKTSFWWLNPLMKTGLEKTLLDDDIPKLRVFDRAESCYFSFVEQLNKQKQHEPSSHLSVLWTIILCHKREILITGFFAFLKVLTLSSGPMILNEFILVAEGNESFKYEGYLLAISIFLVKIIESISQRQWYFRSRLVGVKIRSLLTAATYKKMLSLSNSARLNHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCIALIILFRTIGLATLASLVVIVLTVLCNAPLANLQHKFQTQLMVAQDERLKASSEALVNMKVLKLYAWETHFKNVVDNLRNVELNFLSPVQLRRTYHIFIFMTSLMLASTASFFACYFLKIPLNASNVFTLVATLRLVQDPIANIPEVIAAIIQAKVAFARIVNFLEAPELQSENFRNRCFKDDLKDTISIKCADFSWEGNSSKPSLRNINLDVRHGQKVAICGEVGSGKSTILATILGEVSKTKGTIDVHGKFGYVSQTAWIQTGTIRENILFGSELDDQRYQETLQRSSLEKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYKNADIYLLDDPFSAVDAHTAKNLLNEYIMEGLKGKTVLLVTHQVDFLPAFDNILLMSNGAILQAGSYQQLLSSSQEFHNLVNAHKETAGSNQLVSVTSSERHSTSGKSTLDRVLKEFIPPSGNQLIQEEEREIGNTGLKPYLQYLNRTKGYILFSVASLCFLFSVVCQILQNSWMAAKVDDPLVSTLQLILVYFVIGVFSIIFLFIRCLLVVALGLQSSKDLFSQLMNSLFRAPMSFYDSTPLGRVLTRVSSDLSIMDIDIPFILSFAVGGTIVLYSNLIVLAVVTWKVLIVAIPMVYVAFRLQRYYFASAKELMRLNGTTKSSLANHVAETVAGAVTIRAFEGEDRSFEKNLDLIDNNASAFFHSFASNEWLIQRLETLSAVVLAAATLCMVMLPPGTFPSGIIGMALTYGLSLNGALIFAIQNQCTLANHIISVERLNQYMHIQSEAEEIIEGNRPPLNWPVAGEVEINNLKIRYRHGGPLVLHGITCTFKAGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIVVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRFNLDPLSQHTDQEIWEVLGKCQLREVVQEKEEGLDSSGTFSSLIVIATLEVHCVSKLVLTSEDCYAVVEDGSNWSMGQRQLFCLGRALLRRSKILVLDEATASIDNSTDLIVQKTIRAEFADCTVITVAHRIPTVMDCNMVLAISDGKLAEYDEPTSLMKRENSMFRQLVKEYWSHFQSTESH* | 1504 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr6g0934 | 1503 | Gene3D | ABC transporter type 1, transmembrane domain | 880 | 1210 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr6g0934 | 1503 | PANTHER | ABC TRANSPORTER C FAMILY PROTEIN | 1385 | 1503 | - | - | |
Mtr6g0934 | 1503 | PANTHER | ABC TRANSPORTER C FAMILY PROTEIN | 69 | 1356 | - | - | |
Mtr6g0934 | 1503 | SUPERFAMILY | ABC transporter transmembrane region | 902 | 1210 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr6g0934 | 1503 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 916 | 1191 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr6g0934 | 1503 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 69 | 1356 | - | - | |
Mtr6g0934 | 1503 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 1385 | 1503 | - | - | |
Mtr6g0934 | 1503 | CDD | ABCC_MRP_domain1 | 620 | 819 | - | - | |
Mtr6g0934 | 1503 | Gene3D | ABC transporter type 1, transmembrane domain | 290 | 596 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr6g0934 | 1503 | ProSitePatterns | ABC transporters family signature. | 745 | 759 | IPR017871 | GO:0005524 | |
Mtr6g0934 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 615 | 843 | IPR027417 | - | |
Mtr6g0934 | 1503 | SMART | AAA_5 | 647 | 820 | IPR003593 | - | |
Mtr6g0934 | 1503 | SMART | AAA_5 | 1254 | 1475 | IPR003593 | - | |
Mtr6g0934 | 1503 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 305 | 585 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr6g0934 | 1503 | Gene3D | - | 1212 | 1493 | IPR027417 | - | |
Mtr6g0934 | 1503 | Pfam | ABC transporter transmembrane region | 305 | 566 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr6g0934 | 1503 | Pfam | ABC transporter transmembrane region | 919 | 1171 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr6g0934 | 1503 | Pfam | ABC transporter | 638 | 772 | IPR003439 | GO:0005524 | |
Mtr6g0934 | 1503 | Pfam | ABC transporter | 1245 | 1422 | IPR003439 | GO:0005524 | |
Mtr6g0934 | 1503 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 622 | 843 | IPR003439 | GO:0005524 | |
Mtr6g0934 | 1503 | SUPERFAMILY | ABC transporter transmembrane region | 293 | 598 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr6g0934 | 1503 | CDD | ABCC_MRP_domain2 | 1226 | 1475 | - | - | |
Mtr6g0934 | 1503 | CDD | ABC_6TM_ABCC_D1 | 306 | 593 | IPR044746 | GO:0140359 | |
Mtr6g0934 | 1503 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1228 | 1491 | IPR003439 | GO:0005524 | |
Mtr6g0934 | 1503 | Gene3D | - | 597 | 861 | IPR027417 | - | |
Mtr6g0934 | 1503 | CDD | ABC_6TM_ABCC_D2 | 910 | 1203 | IPR044726 | GO:0140359 | |
Mtr6g0934 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1218 | 1491 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr6g0934 | Mtr-Chr6 | 12166706 | 12175185 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr6g0934 | 614 | 877 | Calmodulin-binding Proteins | AT2G36910 | 30.847 | 6.43e-28 | 121 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr6g0934 | K05666 | - | gmx:100787314 | 2224.9 |