Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0919 ATGACAGGAAATTGTGAGAATTATGCAATCGGAATCGACTTAGGAACAACCCGTTCTTGTGTTGCTGTATATATGCCTGATCATGATCGGGTAGATATCATAGGAACAACGCTTTCTTCTGTTTCCTTCACTGATACTGAAAAAATTATTGGTGGTTTTTCTCGAAACGCCACCAAAACTGTTTATGATGCAAAAAGACTAATCGGTATGAAATTTAGCGACGATGTAGTTCAGAGTGATATGAAGTTTTTGCTATTTAAATTAATTAGTGACGTCAATGACGAACTCAAGATTGTTGTCAATTACAAAAAAACGGAAAGACATTTTACACCGGAGAAAATTTCATCGATGGTATTGGCAAAATTGAAAGAGATTGCTGAAGCTAAACTTGGAAGAGTCAAAGACGTTGTTATTAGTGTCCCGGCTTGTTTCAGTAACTCCCAACGCGAGTCAACTCGAAAGGCAGGTACTATGGTAGGTTTTAATGTCATGCAAATAATCAATGAACCTAGTGCTGCAGCCATTGCATATATTCACACTAAACCTAGTAATCATAGCCGTAGAAATGTTTTCATCTTCGATTTGGGTGGCGGTACTTTGGATGTGTCTATTCTCACACTTGAGAATGGTGCCATCAAAGTTAGGGCCGTTGGCGGAGACACTCACCTTGGGGGACAAGACTTCAATAATACAATGGTGAAATATTTTGTGGAAGTGTTCCGGAAGAGGTATAAAATAGACATTAGTGGAGATTTAACATCCCTTAGGAGGTTGAAGTCAGCTTGCGAGAAAGCAAAATTGATATTGTCATATAAATATGAGACCACCATTGTGATAAAATCTTTAAACCGAGGTGAAAATCTCGAATCAAAAATTAGTCGCGCAAAGTTTGAAGAACTCAACGAACATCACATCAAAAAGTGCATGAAGATTGTAGAAAAGTGTCTAGAGGATAGTGGGATGGTCAAGAGTGACATTCATGATGTTGTGCTTGTTGGCGGCTCTACTAGGATTGTAAAGCTGCATCGACGTTTAAGTGGTTTCTTTGGTGAGAAGAAATTATGCAAAAGCATCAATGCTGATAAGGCGGTTGCATATGGCGCTGCTGTCCACGCTGCTATGTTGAGTGTTAAGCAGAAGTTTCCTTTGAGGGAGGTCATTCCTTTGTCCCTGGGATTGAAAACACCAGGAGAAATCATGGACATAATAAGTCCTAGGAACACCAAAATTCCTAGGAATATGGAAAAGGTGATCACCACATATTTTCCCAACCAAGTCAATATTCCGATTCAAGTTTATGAGGGTGATCAGTTGAAAACTTTGCTAGGAAGTTTTGAGATTGAAATTCCTCCAGTTCCAGCAGGTGTTCCTAAGATTCGAATCAACTTCCAAATTGATCATGATGGCATATTACATGTCTATGTCTCGGAAAAACATCTTGGAATTCATAATAAGAAGCTTGTAATCACTGTAAGTGACAAGGTAAGGCGGTCAATGAAGGAAATTGAGAGGAAGATCAACGAAGCTGAGAAGTACAAAGACGAAGTTAAGAGACGTAGGATGATGGTAGAAGCGGACAAGAGACGTAGGAAGAACGCGATAAATGCAGTAAAAAGGTATGCATACAAGATGAAGGATGCCATTAATGATAAGGATATTAGCTTTATGCTTTTGTCAAAAGAAAAGAAAAAGATCAATGATGCAATTGGTTTGACTTTACTCTGGCTTCGTGTTAATCATGAGGATGCAAAACAACATGAAATTGAGGAACATAGGAGAATGCTTTCAAGTGTGTTTGATGGAATTATTGTGAAGAAGATAAAGGATGAGGAGCATGGTGTGCAAGAAAACAAGAAAAAGAATCATTGGTTACCGTTATTACTAAAATATACTTTCCAGGTAGTGTATATAGCTGCAACAAATGACATCACTGGCTTAATATCTTCCATATTTGTGTCTAATTAA 1965 0.3817 MTGNCENYAIGIDLGTTRSCVAVYMPDHDRVDIIGTTLSSVSFTDTEKIIGGFSRNATKTVYDAKRLIGMKFSDDVVQSDMKFLLFKLISDVNDELKIVVNYKKTERHFTPEKISSMVLAKLKEIAEAKLGRVKDVVISVPACFSNSQRESTRKAGTMVGFNVMQIINEPSAAAIAYIHTKPSNHSRRNVFIFDLGGGTLDVSILTLENGAIKVRAVGGDTHLGGQDFNNTMVKYFVEVFRKRYKIDISGDLTSLRRLKSACEKAKLILSYKYETTIVIKSLNRGENLESKISRAKFEELNEHHIKKCMKIVEKCLEDSGMVKSDIHDVVLVGGSTRIVKLHRRLSGFFGEKKLCKSINADKAVAYGAAVHAAMLSVKQKFPLREVIPLSLGLKTPGEIMDIISPRNTKIPRNMEKVITTYFPNQVNIPIQVYEGDQLKTLLGSFEIEIPPVPAGVPKIRINFQIDHDGILHVYVSEKHLGIHNKKLVITVSDKVRRSMKEIERKINEAEKYKDEVKRRRMMVEADKRRRKNAINAVKRYAYKMKDAINDKDISFMLLSKEKKKINDAIGLTLLWLRVNHEDAKQHEIEEHRRMLSSVFDGIIVKKIKDEEHGVQENKKKNHWLPLLLKYTFQVVYIAATNDITGLISSIFVSN* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0919 654 Pfam Hsp70 protein 9 602 IPR013126 GO:0005524|GO:0140662
Mtr6g0919 654 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mtr6g0919 654 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 533 610 IPR029048 -
Mtr6g0919 654 Gene3D Actin; Chain A, domain 4 224 307 - -
Mtr6g0919 654 Gene3D - 527 608 IPR029048 -
Mtr6g0919 654 PANTHER HEAT SHOCK PROTEIN 70KDA 6 587 IPR013126 GO:0005524|GO:0140662
Mtr6g0919 654 SUPERFAMILY Actin-like ATPase domain 187 375 IPR043129 -
Mtr6g0919 654 Coils Coil 492 519 - -
Mtr6g0919 654 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 381 525 IPR029047 -
Mtr6g0919 654 Gene3D - 10 373 - -
Mtr6g0919 654 Gene3D - 62 117 - -
Mtr6g0919 654 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 6 587 - -
Mtr6g0919 654 ProSitePatterns Heat shock hsp70 proteins family signature 2. 192 205 IPR018181 -
Mtr6g0919 654 SUPERFAMILY Actin-like ATPase domain 8 180 IPR043129 -
Mtr6g0919 654 PRINTS 70kDa heat shock protein signature 8 21 - -
Mtr6g0919 654 PRINTS 70kDa heat shock protein signature 136 156 - -
Mtr6g0919 654 PRINTS 70kDa heat shock protein signature 198 208 - -
Mtr6g0919 654 PRINTS 70kDa heat shock protein signature 326 342 - -
Mtr6g0919 654 PRINTS 70kDa heat shock protein signature 358 378 - -
Mtr6g0919 654 PRINTS 70kDa heat shock protein signature 380 399 - -
Mtr6g0919 654 PRINTS 70kDa heat shock protein signature 456 472 - -
Mtr6g0919 654 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 384 526 IPR029047 -
Mtr6g0919 654 Gene3D - 182 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0919 Mtr-Chr6 11875965 11884466 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0919 1 605 Calmodulin-binding Proteins AT3G12580 49.522 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0919 K03283 - gmx:100798636 603.594