Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0915 ATGATTAAGAGATCTGGACGCGATACAATTGTTTTTTTCATAGTGTACACAACTCTCTTTTGTTTTGTAGATGCAAAGAGGCTAATTGGTCGGAAATTTTGCGATCCCATAGTAGAAAGTGATGTGAAGTTGTGGCCATTCATACATAAACCCATGATTGTTGTTAACTATAATGACGAGGAAAAGCATTTTGCTGCTGAAGAAATCTCATCCATGGTATTGGCGAAAATGCGCGAGACAGCAGAAGCCTTCCTTGGATCAACAGTGGAGGATGTTGTTATAACTGTGCCTGCATACTTTAATGACTCACAACGCCAATCTACTCGAGATGCAGGTGCTATTGCTGGCCTCAATGTTTTGGGAATACTCAATGAGCCTACTGCAGCTGCAATTGCATATGGCTTTGACACAAAACCATCACATGGACATAGAAATGTTTTCATTTTTGACTTAGGTGGTGGTACTTTGGACGTGTCTGTTCTCAAATTTGAGAATGGTGATATCAATGTTAAGGCTATTGTAGGAGACACTCACCTCAGGGGGCAAGACTTTGATAACGCAATGGTGAACCATTTTGTGAAAGTGTTCTTAAGGAAGTATAAAATCGACATTAGTGGAGATCCAAGAGCCGTTAGGAGGCTGAAGACTGCTTGTGAGAGATCAAAAAGGATACTTTCTGTCAATACTTAGACTACCATTGAGATAGAGTGTTTAAACCAAGGTACAAATTTCTCCTCGTCGATTAGTCGTGCAAAGTTTGATGATCTCAACAAGAGTCTTTTTAACCAGTGCATGGAGAGTGTAGAAAACTGTATAGCAGATAGTGGGATAAACAAGAGTAACTTTCATGATGTTGTCCTTGTTGGCGGCTCTACAAGGATTGTAAAAGTTCAAGGCCTTTTGGTTGATTTCTTTGAAATTAATGAGCATAGTAGGACGAAGTTATGCAAAAGCATCAATGCAGATGAGGCGGTTGCATATGGTGCTTCTATAGGACAGCAACCAGCTGCTGGTAACGGAGAGGTGAGAATGCTGGAGACCTTCTTGAGGAATCATCCACCGGCTTTTAAGGGGAGGGATTTTGAAGTAGATTTAGTTTGCTTACCACTGACGGGGATGGATGTTATATTTGGGATGAATTGGTTAGAGTATAACCGAGTTCATGTCAACTGCTTTAACAAGACCGTGCATTTTTCTTCTGCTGAAGAAGAGAGTGGAGTTGAGATTTTATCTACAAAGGAGATGAAGCAGCTAGAACGAGATGAGATTCTGATGTATTCCCTAATGGCATGTTTGTCGTTAGAAAACCAAGCTGTGATCGACAGGTTTATTGAGGGATTCTCAAGGTTAGCTTTGCCGTTGACTCAGTTAACCTGTAAGGGTAAGTCGTTTGTATGGGATGCTCAATGTGAGAGTAGCTTCAATGAGTTGAAGAGGAAGTTGACAACCGCGCCTGTTTTAATTTTGCCTAAGCCGGATGAACCTAATCAAACTGAAGATGGTGATTTCAAGGTTGATGAACACGGTGTGTTGAGGTTCTGA 1542 0.4105 MIKRSGRDTIVFFIVYTTLFCFVDAKRLIGRKFCDPIVESDVKLWPFIHKPMIVVNYNDEEKHFAAEEISSMVLAKMRETAEAFLGSTVEDVVITVPAYFNDSQRQSTRDAGAIAGLNVLGILNEPTAAAIAYGFDTKPSHGHRNVFIFDLGGGTLDVSVLKFENGDINVKAIVGDTHLRGQDFDNAMVNHFVKVFLRKYKIDISGDPRAVRRLKTACERSKRILSVNT*TTIEIECLNQGTNFSSSISRAKFDDLNKSLFNQCMESVENCIADSGINKSNFHDVVLVGGSTRIVKVQGLLVDFFEINEHSRTKLCKSINADEAVAYGASIGQQPAAGNGEVRMLETFLRNHPPAFKGRDFEVDLVCLPLTGMDVIFGMNWLEYNRVHVNCFNKTVHFSSAEEESGVEILSTKEMKQLERDEILMYSLMACLSLENQAVIDRFIEGFSRLALPLTQLTCKGKSFVWDAQCESSFNELKRKLTTAPVLILPKPDEPNQTEDGDFKVDEHGVLRF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0915 512 Pfam Retroviral aspartyl protease 354 402 - -
Mtr6g0915 512 PANTHER HEAT SHOCK PROTEIN 70KDA 22 426 IPR013126 GO:0005524|GO:0140662
Mtr6g0915 512 Gene3D - 21 330 - -
Mtr6g0915 512 Pfam Hsp70 protein 22 338 IPR013126 GO:0005524|GO:0140662
Mtr6g0915 512 PRINTS 70kDa heat shock protein signature 154 164 - -
Mtr6g0915 512 PRINTS 70kDa heat shock protein signature 92 112 - -
Mtr6g0915 512 PRINTS 70kDa heat shock protein signature 281 297 - -
Mtr6g0915 512 SUPERFAMILY Actin-like ATPase domain 19 137 IPR043129 -
Mtr6g0915 512 SUPERFAMILY DNA/RNA polymerases 440 496 IPR043502 -
Mtr6g0915 512 Gene3D - 23 72 - -
Mtr6g0915 512 Gene3D - 138 315 - -
Mtr6g0915 512 SUPERFAMILY Actin-like ATPase domain 143 330 IPR043129 -
Mtr6g0915 512 Gene3D - 430 495 IPR043128 -
Mtr6g0915 512 ProSitePatterns Heat shock hsp70 proteins family signature 2. 148 161 IPR018181 -
Mtr6g0915 512 Gene3D Actin; Chain A, domain 4 181 262 - -
Mtr6g0915 512 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 22 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0915 Mtr-Chr6 11846342 11855329 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0915 24 345 Calmodulin-binding Proteins AT5G02500 62.727 3.69e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0915 K03283 - sspl:121761843 400.593