Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0914 ATGGATAATGAGTGTGTGGAAAATTCCAATGTTGAGTGTTTAGAAGACCATGAGATAGTTGATGATGTGTCTAATGATTTAGAACCAAATTCAGAAAATTCCAAGTCGCCTGAAGCTAATATTTGTCCTATTGTTGATATGGAATTTGACTCCATTGCGGATGTAAAAGAATTCTACACATCATTTGCCAAGAAAGAAGGTTTTGGAGTTCGTGTTCGGTCTACTAAGCAAAATTTTTGCATGTTTGTATGCGCTAATGAAGGTACACATATAATGAAGGGTGAAAATGAAGAAGGGAAGAGAAAGCGTTCAACCTCAAGAACTGATTGTAAAGCATCACTTACTGTTTCAAAAGCAGGGAAGAGAAGTAAATGGGTTATAAAAAGGATAAACAATGTTCACAATCATGGAATGGTTAGTCCTAAGAGTGTGGCCTATCTTCGGTCTCATAAGAAAATGACTACAACAACTAAAAGCCTCGTTGGAAGTTTGATGAAGAAGGAGTACCTACAGGGAAAGTTGCTACAATGTTTCAGGGTGAAGATAATGCTTTTTCTAGTTGGGATTGCTGGAATCATCTTAGAAATCTATGAAGAAGAAATCTTGATGTGGAAGATGCTCAAGCTATGCACTTTTTTTGCCGGCATGAACACTACACAAAGGAGTGAGAGTATTAATGCCTTTTTTGATTCTTTTGTTAATTCTTCAACAACACTACAAGGTTTTGTAGTTAAATTTGACAAGGCAATGGATAGCCGCTATGAAAAACAAAGAAGAGAGGATTTTGAATCAAGGCATCGATTGCGACTCGTAGTTGTTAAGTCAAAAATTGAGGAGCATGCAGCATCAATATATACAAGAAACATTTTTGGGAAGTTTCACGATGAGTTTATAAAGATTATTCAATTTAGGAGGGAAAAACTTGAAAAATAA 933 0.3569 MDNECVENSNVECLEDHEIVDDVSNDLEPNSENSKSPEANICPIVDMEFDSIADVKEFYTSFAKKEGFGVRVRSTKQNFCMFVCANEGTHIMKGENEEGKRKRSTSRTDCKASLTVSKAGKRSKWVIKRINNVHNHGMVSPKSVAYLRSHKKMTTTTKSLVGSLMKKEYLQGKLLQCFRVKIMLFLVGIAGIILEIYEEEILMWKMLKLCTFFAGMNTTQRSESINAFFDSFVNSSTTLQGFVVKFDKAMDSRYEKQRREDFESRHRLRLVVVKSKIEEHAASIYTRNIFGKFHDEFIKIIQFRREKLEK* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0914 310 Pfam FAR1 DNA-binding domain 57 139 IPR004330 -
Mtr6g0914 310 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 163 IPR031052 GO:0006355
Mtr6g0914 310 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 211 309 IPR031052 GO:0006355
Mtr6g0914 310 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 34 163 - -
Mtr6g0914 310 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 211 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0914 Mtr-Chr6 11835493 11845822 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g0914 FAR1 3.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0914 - - mtr:MTR_1g019850 326.635