Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0910 ATGTCATCAGGAATAGGTAAGAAAGTTGCAATAGGAATCGACCTAGGAACAACCTATTCTTGTGTTGCAGTGTGTAAGAAGAATGGAGAGGTACATATAATAGTGAACGACCAAGGGAACAGAACAACACCTTCTTGTGTTGCATTCAAAAACTATGAAAGAATTATTGGTGATGCTGCTTTCAATACGGCTGCTTCAAACCCTACAAACACTATTTTCGATGCAAAGAGGCTAATTGGTCGGAAATTTTGCGACCCCATAGTAGAAAGTGATGTGAAGTTGTGGCCATTCAAAGTAATTGGCGACCTAAATGACAAACCCATGATTGTTGTTAACTATAAAGACGAGGAAAAGCATTTTGCTGCTGAAGAAATCTCATCCATGGTATTGGCGAAAATGCGAGAGACAGCAGAAGCCTTCCTTGGATCAACAGTGGATGATGTTGTTATAACTGTGCCTGCATACTTTAATGACTCACAACGCCAGTCTACTCGAGATGCGGGTGCTATTGCTGGCCTCAATGTTTTGCGAATACTCAATGAGCCTACTGCAGCTGCAATTGCATATGGCTTTGGCATGAAACCATTTAATCATGGACGTAGAAATGTTTTCATATTTGACTTAGGTGGTGGTACTTTGGACGTGTCTGTTCTCACATTTGAGGATGGTGATATCAATGTTAAGGCTATTGCAGGAGACACTCACCTCGGGGGACAAGACTTTGATAATGCAATGGTGAACCATTTTGTGAAAGAGTTCTTGAGGAAGGAAAAAATGGACATTAGTGGAAATCCAAGAGCCCTTAGGAGGCTGAAGACTGCTTGCGAGAGAGCAAAAAGGATACTTTCTGTCAATACTGCGACTAACATTGAGATAGATTGTTTAAATGAAGGTAAAGATTTTTTGTCAACGATTAGTCGTGCAAAGTTCGACGATCTCAACAAGAGTCTTTTTGACCAGTGCATGGAGATTGTAGAAAAGTGTATAGAAGATAGTGGGATAGTGAAGAGTAACATTCATGATGTTGTGCTTGTTGGCGGGTCTACCAGGATTGTAAAAGTGCAACAACTTTTGATTGATTTCTTTGGAATTAAAAAAGGTAGTGGGACGGAGTTATGTAAAAGCATCAATGCAGATGAGGCAGTTGCATATGGCGCTGCTGTCCATGCTTTTATAGCAAGTGGTGAGATTTGTGAAAAGTTTCAAGATTTGACATTGAGGGAAGTCAATCCTTTGTCCCTTGGAATTAATATCAAAGGGGGCCTCATGAGCGTAATAATTCCTAGGAATACCACGATTCCTACCAATATGGAAGATGTATACACCACCAGTGAACCCAACCAAAATAGTTTATCAATTTCCGTTTATGAGGGTGAGAGGCAAACAACTAAGGACAACAACTTGCTAGGATCTTTTGAGTTTGAAATTCCTCCATGTCCAAAAGGTGATCAAAAATTCGTGGTCAACTTCCAAATTAACGATGATGGCATCTTAGACGTCTCTGTTACGGAGAAAGCCTTCGGAATCGATAAAAGGTTTAAAATAGTAAATGACAAGGGAAGACTGTCAAAGGAGGAAATTGAGAGGATGATCAGTGAAGCTGAGAAATACAAAGATGAAGACATGAGGCATAGGAAGAAGGTTGAATCGAGAAATGCACTAGAGAAGTACGCATACAATATGAGGGATTCCATAAATGATCCAGAAGTTAGCTCGAAGCTTTCGTCAAAAGAAAAGGAAAAGATCAATAACGCAGTTGATTTGGTCTTCATGTGGCTTGACGCTAATAAGGTAGTAGAACAACAAGATTTTGAGTGTTATAGGAGCATTCTTTCAAGTGTGTTTGATCCAATTATTTTGAAGATGATAAAGGATGAGGGGCATGGTGTGGAAGAAGGTACTATGGTTGGGCATCCAGTGAAGAAAAAGAAGAATCGTTGGTTACCATTATTAGCCAAATATTGTTTCCAGACAGTGTATGCAGCTGCAACAGGTGACATCACCGGGATAGTTTCTTCTGGAATTGTTGACTTTATAAAAAGTTAA 2046 0.3978 MSSGIGKKVAIGIDLGTTYSCVAVCKKNGEVHIIVNDQGNRTTPSCVAFKNYERIIGDAAFNTAASNPTNTIFDAKRLIGRKFCDPIVESDVKLWPFKVIGDLNDKPMIVVNYKDEEKHFAAEEISSMVLAKMRETAEAFLGSTVDDVVITVPAYFNDSQRQSTRDAGAIAGLNVLRILNEPTAAAIAYGFGMKPFNHGRRNVFIFDLGGGTLDVSVLTFEDGDINVKAIAGDTHLGGQDFDNAMVNHFVKEFLRKEKMDISGNPRALRRLKTACERAKRILSVNTATNIEIDCLNEGKDFLSTISRAKFDDLNKSLFDQCMEIVEKCIEDSGIVKSNIHDVVLVGGSTRIVKVQQLLIDFFGIKKGSGTELCKSINADEAVAYGAAVHAFIASGEICEKFQDLTLREVNPLSLGINIKGGLMSVIIPRNTTIPTNMEDVYTTSEPNQNSLSISVYEGERQTTKDNNLLGSFEFEIPPCPKGDQKFVVNFQINDDGILDVSVTEKAFGIDKRFKIVNDKGRLSKEEIERMISEAEKYKDEDMRHRKKVESRNALEKYAYNMRDSINDPEVSSKLSSKEKEKINNAVDLVFMWLDANKVVEQQDFECYRSILSSVFDPIILKMIKDEGHGVEEGTMVGHPVKKKKNRWLPLLAKYCFQTVYAAATGDITGIVSSGIVDFIKS* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0910 681 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 549 627 IPR029048 -
Mtr6g0910 681 PRINTS 70kDa heat shock protein signature 9 22 - -
Mtr6g0910 681 PRINTS 70kDa heat shock protein signature 38 50 - -
Mtr6g0910 681 PRINTS 70kDa heat shock protein signature 60 68 - -
Mtr6g0910 681 PRINTS 70kDa heat shock protein signature 148 168 - -
Mtr6g0910 681 PRINTS 70kDa heat shock protein signature 211 221 - -
Mtr6g0910 681 PRINTS 70kDa heat shock protein signature 376 396 - -
Mtr6g0910 681 PRINTS 70kDa heat shock protein signature 403 422 - -
Mtr6g0910 681 PRINTS 70kDa heat shock protein signature 483 499 - -
Mtr6g0910 681 Pfam Hsp70 protein 10 618 IPR013126 GO:0005524|GO:0140662
Mtr6g0910 681 Gene3D - 194 373 - -
Mtr6g0910 681 Gene3D Actin; Chain A, domain 4 237 320 - -
Mtr6g0910 681 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 399 555 IPR029047 -
Mtr6g0910 681 Gene3D - 551 624 IPR029048 -
Mtr6g0910 681 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 398 550 IPR029047 -
Mtr6g0910 681 PANTHER HEAT SHOCK PROTEIN 70KDA 7 630 IPR013126 GO:0005524|GO:0140662
Mtr6g0910 681 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Mtr6g0910 681 Gene3D - 73 128 - -
Mtr6g0910 681 Gene3D - 11 390 - -
Mtr6g0910 681 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 7 630 - -
Mtr6g0910 681 SUPERFAMILY Actin-like ATPase domain 200 391 IPR043129 -
Mtr6g0910 681 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Mtr6g0910 681 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0910 Mtr-Chr6 11746461 11750350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0910 3 627 Calmodulin-binding Proteins AT3G12580 62.620 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0910 K03283 - gmx:100798636 824.313