Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0909 ATGATTGTTGTTAACTATAATGACGAGGAAAAGCATTTTGCTGCAGAAGAAATCTCATCCATGGTATTGACAAAAATGGGCGAGATTGCTGAAGCTTACCTTGGATCAACAGTGAAGGATGTTGTTATAATTGTGCCTACATACTTTAATGATTCACAACGTCGCCAGTCTACTTGAGATGCGGGTGCTATTGCTGGCCTCAATGTTTTGCGAATAATCAATGAGCCTTCTGCAGCTGCAATTGCATATGGTCTTGACATGAAACCTTTTAATCATGGATGTAGAAATGTTTTCATTTTTTATTTAGGTGGTGGTACTCTGGATGTGTCCATTCTCACATTTGAGAATGGTGCTATCAATGTTAAGGCGATTGCAGGAGACACTCACCTTGGGGGACAAGACTTTGATAATACAATGGTGAACCATTTTGTGAAAGAGTTCTCGAGGAAGTATAAAATCGACATTAGTGGAGATCCAAGAGCCCTTAGGAGGTAGAAGTCTGCTTGCGAGAAAGCAAAAAGGATACTTTCTTCCAATACTACGACCACCATTGAGATAGAGAGTTTAAATCAAGGTATAGATTTCTACTCATCGATTAGTCGCGCAAAGTTTGAGGAACTCAACAAGAATCACTTCGACAAGTGCATGGAGATTGTAGAAAAGTGTATAATTGATAGTGGGATGGACAAGAGTAGCATTCATGATGTTGTCCTTGTTGGTGGCTCTACTAGGATTGTAAAAGTGCAACAAATGGTGAGTGATTTCTTTGGGAGGAAGCTTTTATGCAAAAGCATCAATGTTGATGAGGCAGTGGCATATGGCGCTGCTGTCCATGCTTCTATATTGAGTGGTGAGCGTAGTGAGAAGGTTCAAGATTTACTATTGTCGGAGGTCATTCCTTTGTCCCTTGGATTGGAGACTCAGGGGGGGATTATGAACACAATAATCCCTAGGAATACCAAAATTCCTGCCAAAATGGAACATGTATTCACCACACATTTGCACAACCACATGAATATTCTAATTCATGTTTATGAAGGTGAGAGGAAAATAACTAGGGAAAACACTTTACAAAAAAAATGCTCTTCCGACTCTGGAGTATTTGCGAACCGTAGAAATTTGTAG 1125 0.3991 MIVVNYNDEEKHFAAEEISSMVLTKMGEIAEAYLGSTVKDVVIIVPTYFNDSQRRQST*DAGAIAGLNVLRIINEPSAAAIAYGLDMKPFNHGCRNVFIFYLGGGTLDVSILTFENGAINVKAIAGDTHLGGQDFDNTMVNHFVKEFSRKYKIDISGDPRALRR*KSACEKAKRILSSNTTTTIEIESLNQGIDFYSSISRAKFEELNKNHFDKCMEIVEKCIIDSGMDKSSIHDVVLVGGSTRIVKVQQMVSDFFGRKLLCKSINVDEAVAYGAAVHASILSGERSEKVQDLLLSEVIPLSLGLETQGGIMNTIIPRNTKIPAKMEHVFTTHLHNHMNILIHVYEGERKITRENTLQKKCSSDSGVFANRRNL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0909 372 Gene3D - 2 21 - -
Mtr6g0909 372 SUPERFAMILY Actin-like ATPase domain 94 282 IPR043129 -
Mtr6g0909 372 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 277 362 IPR029047 -
Mtr6g0909 372 PRINTS 70kDa heat shock protein signature 104 114 - -
Mtr6g0909 372 PRINTS 70kDa heat shock protein signature 231 247 - -
Mtr6g0909 372 PRINTS 70kDa heat shock protein signature 263 283 - -
Mtr6g0909 372 PRINTS 70kDa heat shock protein signature 41 61 - -
Mtr6g0909 372 PRINTS 70kDa heat shock protein signature 290 309 - -
Mtr6g0909 372 Gene3D Actin; Chain A, domain 4 131 212 - -
Mtr6g0909 372 PANTHER HEAT SHOCK PROTEIN 70KDA 1 358 IPR013126 GO:0005524|GO:0140662
Mtr6g0909 372 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 1 358 - -
Mtr6g0909 372 Gene3D - 87 260 - -
Mtr6g0909 372 Pfam Hsp70 protein 4 354 IPR013126 GO:0005524|GO:0140662
Mtr6g0909 372 Gene3D - 22 276 - -
Mtr6g0909 372 SUPERFAMILY Actin-like ATPase domain 2 86 IPR043129 -
Mtr6g0909 372 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 286 354 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0909 Mtr-Chr6 11741015 11742324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0909 1 355 Calmodulin-binding Proteins AT3G12580 68.820 5.11e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0909 K03283 - gmx:100798636 492.271