Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0907 ATGTCAGGAAGAGGTAAGAAAGTAGCAATAGGAATCGACCTAGGAACAACCTATTCTTGTGTTGCAGTGTGTAAGAATGGAGAGATAGATATAATAGTGAACGACCTAGGGAAGAGAACAACACCTTCTTTTGTTGCATTCAAAGACTCTGAAAGAATGATTGGTGATGCTGCTTTCAATATAGCTGCTTCGAACCCAACAAACACTATTTTCGATGCAAAGAGGCTAATTGGTCGGAAATTTAGTGATCCCATAGTACAAAGTGATGTGAAGTTGTGGCCATTCAAAGTAATTGGTGACCTGAATGACAAACCCATGATTGTTGTTAACTATAATGACGAGGAAAAACATTTTGCTGCTGAAGAAATCTCATCCATGGTATTGGTGAAAATGCGCGAGATAGCAGAAACCTTCCTTGGATCAATAGTGGAGGATGTTGTTATAACTGTGCCTGCATACTTTAATGACTCACAACGCCAGTCTACTCGAGATGCGGGTGCTATTGCTGGCCTCAATGTTTTGCGAATACTCAATGAGCCTACTGCAGCTGCAATTGCATATGGCCTTGACTTGAAACCATTTAATCATGGATGTAGAAATGTTTTCATTTTTGACTTAGGTGGTGGTACTTTGGACGTGTCTGTTCTCACATTTGAGAATGGTGATATCAATGTTAAGGCCACTGGAGGAGACACTCACCTCGGGGGACAAGACTTTGATAATGCAATGGTGAACCATTTTGTGAAAGAGTTCTTGAGAAAACATAAACTCGACATTAGTGGAGATCCAAGAGCCATTAGGAGGCTGAAGACTGCTTGCGAGAGAGCAAAATGTACACTTTCATCCAATAATAAGACTGACATCGAGATAGATTGTTTATATAAAGGTGAAGATTTCTCCTCAGTGATTAGTCGTGGAATTTTCGACAATCTCAGTAAGAGTCTTTTTGACCGGTGCATGGAGAGTGTAGAAAAGTGTATAGAAGATAGTGGGATAGTGAAGAGTAAAATTCATGATGTTGTGCTTGTTGGCGGCTCTACCAGGATTGTAAAAGTGCAACAACGTTTGATTGATTTCTTTGGAATTAATAAGGGTAGTGGGACGGAGTTATGTAAAAGCATCAATGTAGATGAGGCGGTTGCATATGGCGCTGCTGTCCATGCTTTTATAGCAAGTGGTGCGATTTGTGAAAAGTTTCAAGATTTGACATTGAGGGATGTCAATCCTTTGTCCCTTGGAATTAATATGAAAGGGGACCTCATGGGCGTAATAATTCCTAGGAATACCACGATTCCTACCAATAGGGAAAAGTCATTCACCACAGCTGAAGACAACCTAAAAGTTATTTCGATTCATGTTTATGAGGGTGAGAGGCAAATAACTAAGGACAACAACTTGCTAGGAGCTTTTGAGTTTGAAATTCCTCCACGTCCAAAAGGTGTTCTACATTTCGTGGTCAACTTCCAAATTAACGATGATGGCATCTTAGACGTCTCTGTTACGGAAAAAGCCTCGGGAATTGATAAAAGGTTTAAAATAGTAAATGACAAGGGAAGACTGTCACAGGAGGAAGTTGATAGGATGATAAGAGAAGCTGACAAATACAAAGATGAAGACATGAGGCATAGGAAGAAGGTTGAAGCGAGAAATGCACTAGAGATGTACGCATACAATATGAGGGAATTCATAAATGATCCGGATATTAGCTCGAAGATTTCGTCAAAAGAAAAGGCAAACATCAATAACGCAACTGATTTGGTCTTTAAGTGGCTTGACGTTAATGTGGTTGCAGAACAACAAGATTTTGAACATTATAGTAGCATTCTTTCAAGTGTGTTTGATCCAATTGTTATAAAGATGATAAAGGATGAGGGACATTGTGTGCAAGAAGGTACTATGGTTGGACATCCCGTGAACAAAAAAAAGAATCGTTGGTTACCATTATTAGCCAAATATTGTTTCGAGACAGTGTATGCAGCTACAACAGGTGACATCACCGGAATAGTTTCTTCTGTAATGATTGACTTTATAAAAAGTTAA 2040 0.3936 MSGRGKKVAIGIDLGTTYSCVAVCKNGEIDIIVNDLGKRTTPSFVAFKDSERMIGDAAFNIAASNPTNTIFDAKRLIGRKFSDPIVQSDVKLWPFKVIGDLNDKPMIVVNYNDEEKHFAAEEISSMVLVKMREIAETFLGSIVEDVVITVPAYFNDSQRQSTRDAGAIAGLNVLRILNEPTAAAIAYGLDLKPFNHGCRNVFIFDLGGGTLDVSVLTFENGDINVKATGGDTHLGGQDFDNAMVNHFVKEFLRKHKLDISGDPRAIRRLKTACERAKCTLSSNNKTDIEIDCLYKGEDFSSVISRGIFDNLSKSLFDRCMESVEKCIEDSGIVKSKIHDVVLVGGSTRIVKVQQRLIDFFGINKGSGTELCKSINVDEAVAYGAAVHAFIASGAICEKFQDLTLRDVNPLSLGINMKGDLMGVIIPRNTTIPTNREKSFTTAEDNLKVISIHVYEGERQITKDNNLLGAFEFEIPPRPKGVLHFVVNFQINDDGILDVSVTEKASGIDKRFKIVNDKGRLSQEEVDRMIREADKYKDEDMRHRKKVEARNALEMYAYNMREFINDPDISSKISSKEKANINNATDLVFKWLDVNVVAEQQDFEHYSSILSSVFDPIVIKMIKDEGHCVQEGTMVGHPVNKKKNRWLPLLAKYCFETVYAATTGDITGIVSSVMIDFIKS* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0907 679 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mtr6g0907 679 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 547 625 IPR029048 -
Mtr6g0907 679 SUPERFAMILY Actin-like ATPase domain 7 191 IPR043129 -
Mtr6g0907 679 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 3 628 - -
Mtr6g0907 679 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 553 IPR029047 -
Mtr6g0907 679 SUPERFAMILY Actin-like ATPase domain 199 389 IPR043129 -
Mtr6g0907 679 Pfam Hsp70 protein 9 619 IPR013126 GO:0005524|GO:0140662
Mtr6g0907 679 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Mtr6g0907 679 Gene3D - 549 643 IPR029048 -
Mtr6g0907 679 Gene3D - 71 126 - -
Mtr6g0907 679 PRINTS 70kDa heat shock protein signature 8 21 - -
Mtr6g0907 679 PRINTS 70kDa heat shock protein signature 36 48 - -
Mtr6g0907 679 PRINTS 70kDa heat shock protein signature 58 66 - -
Mtr6g0907 679 PRINTS 70kDa heat shock protein signature 146 166 - -
Mtr6g0907 679 PRINTS 70kDa heat shock protein signature 209 219 - -
Mtr6g0907 679 PRINTS 70kDa heat shock protein signature 337 353 - -
Mtr6g0907 679 PRINTS 70kDa heat shock protein signature 401 420 - -
Mtr6g0907 679 PRINTS 70kDa heat shock protein signature 481 497 - -
Mtr6g0907 679 PANTHER HEAT SHOCK PROTEIN 70KDA 3 628 IPR013126 GO:0005524|GO:0140662
Mtr6g0907 679 Gene3D - 10 388 - -
Mtr6g0907 679 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 396 548 IPR029047 -
Mtr6g0907 679 Gene3D - 192 371 - -
Mtr6g0907 679 Gene3D Actin; Chain A, domain 4 235 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0907 Mtr-Chr6 11711117 11716411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0907 1 625 Calmodulin-binding Proteins AT3G12580 61.661 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0907 K03283 - gmx:100798636 788.104