Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0906 ATGGGCGAGATTGCTGAAGCTTACCTTGGATCAACAGTGAAGGATGTTGTTATAATTGTGCCTACATACTTTAATGTTTCACAACGTGGTGGTACTTTGGACGTGTCTATTCTCACATTTGAGATTGGTGCTATCAATGTTAAGGCGATTGCAGGAGACACTCACCTTCGGGGACAAGACTTTGATAATACAATGGTGAACCATTTTGTGAAAGAGTTCTCGAGGAAGTATAAAATCGACATTAGTGGAGATCCAAGAGCCCTTAGGAGGTTGAACTCTGCTTGCGAGAAAGCAAAAAGGATACTTTCTTCCAATACTACGACCACCATTGAGATAGAGAGTTTAAATCAAGGAATAGATTTCTACTCATCGATTAGTCGCGCAAAGTTTGAGGAACTCAACAAGAATCACTTCGACAAGTGCATGGAGATTGTAGAAAAGTGTATAATTGATAGTGGGATGGACAAGAGTAGCATTCATGATGTTGTCCTTGTTGGTGGCTCTACTAGGATTGTAAAAGTGCAACAAATGGTGAGTGATTTCTTCGGGGGGGAAGCTTTTATGCAAAAGCATCAATGTCGATGA 585 0.4068 MGEIAEAYLGSTVKDVVIIVPTYFNVSQRGGTLDVSILTFEIGAINVKAIAGDTHLRGQDFDNTMVNHFVKEFSRKYKIDISGDPRALRRLNSACEKAKRILSSNTTTTIEIESLNQGIDFYSSISRAKFEELNKNHFDKCMEIVEKCIIDSGMDKSSIHDVVLVGGSTRIVKVQQMVSDFFGGEAFMQKHQCR* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0906 194 Gene3D - 26 187 - -
Mtr6g0906 194 Gene3D Actin; Chain A, domain 4 60 140 - -
Mtr6g0906 194 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 30 186 - -
Mtr6g0906 194 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 1 29 - -
Mtr6g0906 194 PRINTS 70kDa heat shock protein signature 31 41 - -
Mtr6g0906 194 PRINTS 70kDa heat shock protein signature 159 175 - -
Mtr6g0906 194 PANTHER HEAT SHOCK PROTEIN 70KDA 30 186 IPR013126 GO:0005524|GO:0140662
Mtr6g0906 194 PANTHER HEAT SHOCK PROTEIN 70KDA 1 29 IPR013126 GO:0005524|GO:0140662
Mtr6g0906 194 Pfam Hsp70 protein 30 186 IPR013126 GO:0005524|GO:0140662
Mtr6g0906 194 SUPERFAMILY Actin-like ATPase domain 30 187 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0906 Mtr-Chr6 11702752 11703492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0906 1 185 Calmodulin-binding Proteins AT5G02500 54.936 1.29e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0906 K03283 - sind:105171901 240.736