Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0902 ATGGAACAGAAACATGTTTTTTTGTCAGCATTGAGTGTTGGTGTTGGATTAGGTGTTGGACTTGGATTGAGTTCAGGACAAGCTGTCCAGAAATGGGTAGGAGGGATCCGCGATATCGACGAGGTTTCTGGTGAGCAGATTGTTGAAGAACTAAAGAGACTTGTTGTTGATGGAAAAGATAGTAAAGTTACATTTGATGAGTTTCCTTATTACCTAAGCGAAAAAACTCGAGTTTTGCTGACAAGTGCGGCATATGTTCATTTAAAACATCTTAACTTTTCCAAGCACACAAGGAACCTCTCACCGGCAAGCAGGGCTATTTTACTTTCTGGTCCTGCAGAACTTTATCAGCAAATGCTTGCCAAAGCTTTAGCACATTACTTCGATTCGAAGTTGCTATTATTAGATGTTACTGATTTCTCTGTGAAGTTGCAAAGCAGATTTGGAATTCCAAGAAAAGAAGCATATTTCAGAAGGTCAATATCCGAGATGACTTTGGAACGAATGTCTGGTTTGTTTGGTTCCTTTTCAATGATGCCTTCAACCGGTGAAACTAGAGGTACTTTGCGTCAACAAAACGTTGAAAGTTCGAATAATCCTCCAAGGCTTAGGAGGAATGCCTCTGCTGCTTCTGATCTAAGTAGCACTTCTTCCCAAAGTGGTTCAACAAATCCAGCTTCTTTAAGACGCACGAGTAGCTTGTGTTTTGATGAAAAGCTCTTTGTACAGTCACTTTACAAGGTTTTGGTTTCTATCTCAGGAACTGATTCCATCATTTTATACATAAGGGATGTTGAGAAGCTTGTTCTCAAATCACCAAGGTTATTTAATTTACTACAAAGAATGATAAATAAATTATCAGGCTCGGTGTTGATACTCGGTTCTCAGATATCTGATTTAGAATATGATTGCAAAGAATTGGATGAAAGGGTCGCTAGGTTATTCCCTTATAACATTGAGATCAAAGTTCCCGAAGATGAAACTCATCTCGGTAGCTGGAAAGGTCAACTCGAAGAAGACATGAAAATCATTCAGTTTCAAGATACTCGAAACCACATTGCTGAAGTACTCGCGGAAAATGACATTGATTGCGATGACTTAAATTCAATATGTCATGCAGACACTATGATACTCAGTAATTATATTGAAGAAATTGTTGTATCCGCGATTTCTTACCATTTGATGATTACTAAGGAACCAGAATACCGAAACGGAAAGCTAGTTATCTCGTCCAATAGTTTGTCGCAGGGATTGAGTCTGTTCGAGGAAGGCAAGAGTAGTGGAAATCTGAAGACTAATGATTCTAACAAGGAAAATGTTGACGATATTGCTGGCGTAAAGAATGATGTGAGGAATGAAAACAAAAGTGAGGGAGAGAAATCTATCCCTGTAACAAAAAAAGAAGGCGAAATTCCAGTGCCTGTAAAAGCGGAAGTTCCCGACAACGAATTCGAGAAGCGAATTAGACCTGAAGTTATCCCTGCAAATGAGATAGGTGTTACATTCGCAGATATCGGTGCATTAGATGAGATAAAAGAATCGCTTCAAGAGCTAGTAATGCTTCCCCTTAGAAGACCAGACCTTTTCAAAGGTGGACTTCTAAAGCCATGTAGAGGTATATTACTTTTCGGTCCACCTGGTACCGGAAAAACAATGCTAGCAAAGGCGATTGCGAATGAAGCAGGAGCAAGTTTCATTAACGTCTCGATGTCCACGATCACTTCAAAATGGTTCGGAGAAGATGAAAAGAATGTCCGAGCTTTGTTCACGCTAGCAGCTAAGGTTGCTCCGACTATTATATTCGTCGATGAAGTTGACAGCATGCTCGGTCAGCGTACTAGAGTCGGAGAACATGAGGCCATGAGGAAGATTAAAAATGAATTCATGACACATTGGGATGGACTACTATCAGGACCTAATGAACAAATTCTTGTTCTTGCTGCTACCAACAGACCATTTGATCTTGATGAAGCAATTATACGACGGTTTGAGCGCAGGATCATGGTTGGTCTTCCATCTGCTGAGAATAGGGAAATGATCCTTAAAACTCTTATGTCAAAGGAGAAACACGAAAACTTAGACTTCAAGGAACTAGCAACCATGACAGAAGGATTTAGTGGAAGTGATTTAAAGAATTTGTGCATAACTGCGGCTTATCGACCTGTTAGGGAGTTAATACAGCAGGAGAGAAAGAAGGAAATGGAAAAGAAGAAAAAAGAAGCAGAAAGTGTAAATTCCGAAGATGCTTCAAATAGTAACGATAACGATGAACCAGAAATTATCTTGAGGCCTTTAAGCATGGAAGACATGAAACAAGCGAAGAATCAGGTGGCTGCAAGTTTTGCATCAGAAGGTTCAGTAATGGCTGAGCTAAAACAATGGAATGAATTGTACGGCGAAGGCGGTTCAAGGAAAAAACAACAGCTCACATACTTCCTTTAA 2442 0.3984 MEQKHVFLSALSVGVGLGVGLGLSSGQAVQKWVGGIRDIDEVSGEQIVEELKRLVVDGKDSKVTFDEFPYYLSEKTRVLLTSAAYVHLKHLNFSKHTRNLSPASRAILLSGPAELYQQMLAKALAHYFDSKLLLLDVTDFSVKLQSRFGIPRKEAYFRRSISEMTLERMSGLFGSFSMMPSTGETRGTLRQQNVESSNNPPRLRRNASAASDLSSTSSQSGSTNPASLRRTSSLCFDEKLFVQSLYKVLVSISGTDSIILYIRDVEKLVLKSPRLFNLLQRMINKLSGSVLILGSQISDLEYDCKELDERVARLFPYNIEIKVPEDETHLGSWKGQLEEDMKIIQFQDTRNHIAEVLAENDIDCDDLNSICHADTMILSNYIEEIVVSAISYHLMITKEPEYRNGKLVISSNSLSQGLSLFEEGKSSGNLKTNDSNKENVDDIAGVKNDVRNENKSEGEKSIPVTKKEGEIPVPVKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLSGPNEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLMSKEKHENLDFKELATMTEGFSGSDLKNLCITAAYRPVRELIQQERKKEMEKKKKEAESVNSEDASNSNDNDEPEIILRPLSMEDMKQAKNQVAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0902 813 Pfam ATPase family associated with various cellular activities (AAA) 540 670 IPR003959 GO:0005524|GO:0016887
Mtr6g0902 813 MobiDBLite consensus disorder prediction 425 460 - -
Mtr6g0902 813 Gene3D - 499 755 IPR027417 -
Mtr6g0902 813 Pfam AAA+ lid domain 692 735 IPR041569 -
Mtr6g0902 813 CDD AAA 538 671 - -
Mtr6g0902 813 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 813 - -
Mtr6g0902 813 SMART AAA_5 536 673 IPR003593 -
Mtr6g0902 813 MobiDBLite consensus disorder prediction 730 745 - -
Mtr6g0902 813 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 813 - -
Mtr6g0902 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 372 IPR027417 -
Mtr6g0902 813 Gene3D - 672 754 - -
Mtr6g0902 813 ProSitePatterns AAA-protein family signature. 643 662 IPR003960 GO:0005524|GO:0016887
Mtr6g0902 813 MobiDBLite consensus disorder prediction 435 460 - -
Mtr6g0902 813 MobiDBLite consensus disorder prediction 730 759 - -
Mtr6g0902 813 MobiDBLite consensus disorder prediction 183 228 - -
Mtr6g0902 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 728 IPR027417 -
Mtr6g0902 813 Coils Coil 722 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0902 Mtr-Chr6 11634582 11640727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0902 441 729 Calmodulin-binding Proteins AT3G56690 35.235 9.87e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0902 - - gmx:100817952 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0902 6 11634582 11640727 Mtr1g3689 1 48575948 48582559 PCT