Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0894 ATGTCTTCAACCATGGATGCAACACCTCCCACCAAGAACAACAATGACAAGGCTTCCTCCCTTGAATTGGATAGTGTCCAGCCTGTTTCCAGCCCCCTTCGAAAGATGGTCGTCGTGGCGTCCATCGCCGCCGGCATTCAATTCGGATGGGCCCTACAGCTCTCCCTTTTGACCCCATACGTGCAGACTCTTGGAGTTCCGCACGTATGGTCTTCTTTTATTTGGCTCTGTGGCCCAATCTCTGGACTCCTTGTCCAACCTATTGTTGGATACTATAGTGACCGAAGCACTTCACGCTTCGGTCGCAGACGCCCATTTATTTTTAGTGGAGCTCTAGCTGTGGCTATTGCCGTCTTCCTTATCGGTTATGCGGCTGACCTTGGTCACTCTTTTGGCGATGACCTGTCGAAGAAAACCCGGCCACGGGCTGTTACATTCTTTGTCATTGGATTTTGGATCCTCGACGTTGCGAATAACATGCTCCAAGGACCGTGCCGTGCTTTCCTTGCCGACCTTGCTGCCGGTGACGAGAAAAAAATGAGAACAGCAAATGGTTTCTTCTCTTTCTTTATGGCCGTCGGAAACATCCTCGGGTATGCTGCCGGATCCTACAGCAAACTCCACAAAATCTTCCCCTTCACCGAAACCGAAGCATGTAATGTCTTCTGCGCGAATCTTAAGAGTTGCTTCTTTTTCTCCATCCTCCTCTTAATCATCCTTGCCACGTTTGCCCTCATCTACGTCGAGGACACACCAAAGACAAAGCCAGAGGTGAAGGATGCTGATGAGACACCGGTTACTTGTTTCGGAGAGTTGTTTGGTGCATTCAAGGAATTAAAGAGACCAATGTGGATATTGATGTTAGTAACAGCCGTGAACTGGATCGCGTGGTTCCCGTTCTTCTTGTTCGACACTGACTGGATGGGCCGTGAGGTGTACGGAGGAGTTTCAGGAGAGAAAGCATATGATACTGGTGTGAGAGTTGGTTCTTTGGGACTTATGCTTAATGCTGTTGTTCTTGGTTTAATGTCTTTGGCTGTGGAGCCATTGGGGAAATTGGTTGGAGGAATTAAGAGGCTTTGGGGAATAGTTAATTTTATTTTGGCTATTTGTTTGGCAATGACTGTCCTCATTACCAAGATAGCTGAGCATGAGCGTCAGACATCCGGTGGTGCAACCATCGGACATCCTTCTGATGGTATCAAGGTCGGGGCCATGCTCTTCTTCGCAATTCTTGGAATCCCTATGGCGATTACTTTCAGTGTTCCATTTGCTCTAGCATCAATATACAGCAGTGCTTCAGGGGCAGGACAAGGTTTATCTATTGGAGTCTTGAATCTTGCAATTGTGGTACCACAGATGTTTGTGTCAGCACTAAGTGGACCTTGGGATGCAATATTTGGTGGTGGTAATTTGCCGGCGTTCGTGGTGGGAGCCGTGGCTGCTGCCGTCAGTGCGGTATTGGCGATGGTCTTGTTGCCGTCAGTAAAACCAGCTGATGAGGCCAAGGTTAGCCTTGCCCCAGGCTTTCACTGA 1536 0.4876 MSSTMDATPPTKNNNDKASSLELDSVQPVSSPLRKMVVVASIAAGIQFGWALQLSLLTPYVQTLGVPHVWSSFIWLCGPISGLLVQPIVGYYSDRSTSRFGRRRPFIFSGALAVAIAVFLIGYAADLGHSFGDDLSKKTRPRAVTFFVIGFWILDVANNMLQGPCRAFLADLAAGDEKKMRTANGFFSFFMAVGNILGYAAGSYSKLHKIFPFTETEACNVFCANLKSCFFFSILLLIILATFALIYVEDTPKTKPEVKDADETPVTCFGELFGAFKELKRPMWILMLVTAVNWIAWFPFFLFDTDWMGREVYGGVSGEKAYDTGVRVGSLGLMLNAVVLGLMSLAVEPLGKLVGGIKRLWGIVNFILAICLAMTVLITKIAEHERQTSGGATIGHPSDGIKVGAMLFFAILGIPMAITFSVPFALASIYSSASGAGQGLSIGVLNLAIVVPQMFVSALSGPWDAIFGGGNLPAFVVGAVAAAVSAVLAMVLLPSVKPADEAKVSLAPGFH* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0894 511 PANTHER SUGAR TRANSPORTER 20 499 - -
Mtr6g0894 511 TIGRFAM GPH_sucrose: sucrose/H+ symporter 32 497 IPR005989 GO:0005887|GO:0008515|GO:0015770
Mtr6g0894 511 Gene3D MFS general substrate transporter like domains 31 493 IPR036259 -
Mtr6g0894 511 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 20 499 - -
Mtr6g0894 511 MobiDBLite consensus disorder prediction 1 22 - -
Mtr6g0894 511 CDD MFS_SLC45_SUC 36 472 - -
Mtr6g0894 511 Pfam MFS/sugar transport protein 45 296 - -
Mtr6g0894 511 SUPERFAMILY MFS general substrate transporter 36 498 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0894 Mtr-Chr6 11491217 11493857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0894 10 511 Sucrose Transporter Gene Family AT1G22710 65.558 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0894 K15378 - gmx:100784153 748.429