Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0878 ATGTCGCTGGAGCCGATACCGTTGGATCGAAAAAGCTCGTCGTTGAGAGAGAGGAAGCAGGGGAGTTCGGAGTCTTTAGGATCAGTAGCAAGATGGAGAGGTTCACCGTCACCTTCTCATCATAATCGACGACCGCATGAGTTTAATCGGTCTGGTGATTTTCGGAGACTGGCAGGTCATCGTAGGATGGGTAGTTGGCAACAATTTCCAGAAGAACGTGAACACATGTTTTCTCGATCTTGTGACAAGAAGCTGGAGGAAGATAACTATCGGCCGTCATTCTCTCGAGGAGAAGGAAGGTATGAAAGGGGAAATAAGGAAAGTAGAGGAACCTTTAGCCAGAGAGAATGGAGAGGACGTTCATCGGAAAATGTGAACAACGCTCCGAATATGTCCAGGAGGCAAACCGGTGCAAGTAATGACCGCAAGTCAGTTGATGATATGCTAACGTATTCCTCTCGTCCAAATTCCGACTTAGTAAATACTTGGGAGCAACATCAAATGAAAGACCAACATAATAAGATGGATGGTGTTAATCGGTTTGGTATAGGTCAAAGATGTGATAGGGATAGTTCTATGGGTACAGTTGACTGGAAGCCACTTAAATGGACCCGACCTGGATCTTCACGAGACTCTGGTTTTAGCCGTTCAAGTGGCATGAGGAGCTTAGGAGGGACAAGTTTGTTGGGAAGCTGTGAAGGTAAGGTTGGGTTGCAACAAAAATTTGTAACTGCTGATGAGTCATATTCAAGGGAAGCTGCTACATTTCGTACTTCTTCTGCTCCATCTGAAGAGACAAATTCTAAGAAGCCTAGGTTAAATTGGGGCGAGGGACTTGCAAAGTTTGAAAAAAAACAAGTTGAGGTGCCTGAGGTAACTTCAAACAAAGATGACCCTGTCTCACCTCCTTTTAATATGGAATCCAATAATTTCCTCAGTCCTGGCTTAGTAGATAAAAGCCCAAAAGTTTTAGGAGTCGCAGGTTGTGCATCTCCTACAACTCTATCTTCTACACCTTGCAGCTCTTCACCAGCAGGTGCAGATGATAAATTGTTTGGAAAAGTTGCAACTTTGGACTGCGATGTTGAAAATTCGGGTTGTTCACCCGGTCCTGGGTGTCAAAGTCATCTGCAAATGTTTTCTTTCAACTTAGAGAAGGTGGATATTGATTCATTGACTAGGTTGGGCTCTTCTCTTGCTGAGTTATTACCACAATTTGATAATCTCAACTCTATCGATTGTAGTGTATTAAGTTCCACCACAATGAATAAGTTGATGTTATTGAAGGCTGACATTTCAAAGTTACTAGAGGTGACCGAAACTGAAATTGATTCACTTGAAACTGAACTTAGATCTCTAAAATCTAAATCTGAGGGTAGATTTTCATGTTCGACAGCGATTGGCTCTCTGGTATGTTGCAATTCAAAATCTTGTGATAAACATGTTGGAGCCTCTGACAAGGTTGCGCATTTTGAGCCATTGCAAATTGTATCTTCTGATGACCTTGTTGTGGAGAAGACACCTTTTTCTTCTAACTTGCTTGACAATCCTGAACCTGCAAGGTCTAAATTTGTAGAGCATCTTCCCATGATTAATGCAGTCTCTAGATGTGATGTGGGGAGATATGGTAATTGCCTTGAAGACTTGGATGGAATTCAATCTACTTCTGTACAATGCTTAGTTCCCTGTACTTATAGGCATGTTGCCAATGTTTCTTCTTGCGGTAATAATTCATCTTTGGAGGTTGTTTCTTCTTGCGGTGATAATAATTCATCTTTAGAGGTTAAAAATGGTGTGGATGCTAAGTCTAGTGCAAGCTTCTATTCTAGCACTGAGGATAATTTATATGATCAAATTATTTCTTGCAATAAAAAAATTGCAAAAGAAGCATCTGACGTAATTGCCAAGTTAATGCCTGAAAAATGTCGCAAGAATAATAATATCGGAGCTAGTAGTAGTTCATGCTCTCATGATGGCACGTTTATTATGGAAGGATTTGCAAAGAGAAGACGATCAGCAAGATTGAAGGAGAGAGTTGTAACACTTAAGTTTAAAGCATTGCAACACTTGTGGAAAGAAGACTCAAGCTTACTGTCTACTAGGAAACACCGCCCAAAATCTCAAAAGAAAATTGAATTAGATCTACGCACCACAAATAATGGTCATCAGAAGAAGCGGTCTTCTTTTCGTTTTCCTTCCCCTGCTGCAAACAAACTAAGATTGGTTCCAACATCTGAGATGATCAAGTATACAAGCCAACTTCTCTCAGAATCAAAACATGACATTCACAGAAGCACCTTGAAGATGCCAGCATTAATTTTGGATCAAAAAGAAAAAATGAATTCAATGTTTTTATCTAGTAATGGGCTGGTTGAAGATCCTCTGGCTATTGAGAAAGAAAGGGCCATGATAAACCCTTGGACTTCAGAAGAGAAAGAGGTTTTCTTGGAGAAATTTGCTGCCTTTGGAAAAGATTTTCAAAAAATTTCTACTTTCCTTGACCACAAGACAACAGCGGACTGTGTGGAATTCTACTACAAAAATCACAAGTCTGATTGTTTTGAGAAAATCAAGAAGAAAGATGATGACAAGGTAGGGAAATTTTTTAACGCCAAAACTGAACTGATAAAATGGAATTCTGAAGCAAACACTTCTTCGCTTGAAGTTTTGAGAGCAGCTTCAGTGACGGCAGATGGTATTGCGCTTAATCGGAAAATGCGTTCTGGACGTTCCCTATGGAGGGGTTATGATAATAAGACCATGTCAAAGGGAGACAAAATCATTGCAGAGAAGCCAAACAGTCATGCCATTATTCAAGAGGAAAGAGAGACTAATGCAGCTGCTGATGTATTGGCTAGTATATGTGATGATTTTCATTTACCTGAGGCAGCGAGTTCCTCCATAACTAGTTCAGCTGATCCTGTGAAAGGCAAAAGGGTCAGGAAGTCGGTGAAAGCGAGGGCCATATGCAAGCAACCTCCGATGCCAGTCATGACTCAAAGTATTGATCCTGAAAGTTGTTCTGACGAGAGCTGCGGTGAAATGGAGCTTACCGATTGGACAGATGTGGAGAAGGCAGCATTTCTCCATGCTCTATCATCTTTTGGAAAGGATTTTGCAAAGATTGCTCAGTGTGTTGGAACAAGATCCCAATTCCAGTGCAGAGCATTTTTTTGCAAGACTCACAAACGCATTGGAATGGATCTCATGGGTGAAAGAGCTGGAGTTGTCGGATCACCGGGGGATGATGATGTGGATGGTGGCAGGAGCGATGCAGATAATGCATGCATTCCAGAGACAGCTTCAGCCAATGGTTCTGATACGTCAGGTTCTAAAACAGTTGTTGACCAGCCTGCATATGATAAGAACCTGTATCAAGAGGAATCTAATCCTTTGGTAGCCAGGAACCTGTCAGCTGAGTCAGATGAATCTGAGGAAATTAACGGAAAAGCTGATCGCAAAGAAGTAAATATTTTTTCTAATGAATACGTGACCGGCAGTGAATCTAAACTGGGCACGGATTGTAATGCAGCTGCCTTGTACAGTTTTGATGGGCCTGGTACTGTCCAGCACCAGAGTGCTATAGTTATCTCGGATAGCACAGAAATTGTAAAAGATAAGCCGAGTGAAGGTGGAGGTGCTGTTACAGAATTGGTGTCTGATATGGGGACAATTGAACCATGCTGCTCTAATTCTGCTGCTGAGGGTAGACTGGTTTCTGATGGTTCTTCTGGGCTTCAGGGAAATGAATTGGAAGCTTCAACTGTATGTCGAGTTGATACAGATGAAGTTGTTACAGATGTTGTAATTGAACTGAAAGACAATGTCCACAATTCAAGAACTTCAGGGAATACTTCACTATCACCCGTGGAAGCATCTTGTTCAAGATTGAGTGCTGATGCTGAAAACGAGCCCCAACTATGCCTTGAAAAACCTCAATTCTCAGGTTTGTCAGAGGGTCCTGTCACAAAATTGAATATGAATATGATCTGCAGCAGTTCAGCAACTGAGTTACCGCTTTTGCCACAAAAGGTTGAACAACAAGGTCCTCACAAAAGTCTGCAGTGTTTGCCAAATTCAGAAGATACACCCAATGTGAAAATATTCGGGAAGGTACTAACCATTCCTTCATCCACCCAGAAGCCTAATTCAAGTGCCAAGAGAAACGAAGAAAATGGTACCCATGATAATACTGGTACAGAATCAGCGAAGCTGAAGGTTTATGACAATGATTTCCGGGGCATTGATTTCAATGCCCCCATCATGAATTCTGGTCATGGGAGCACAGTACAGCCTGCATTTTCACCACCACTTCCGGATTTCAATGCTCCTTATATGGGCTGTAGTCATGGGAATACAATACAGTCTGGTTTCTCATCACTCCCTGCTTCTTCCATTTTGCTCGCGAAGTATCCTGCTGCATTTGGTCTGAATGCGCAGCCATTTATAGATGACGACATGCGGAGAGCAAATGGTTCAGAAGAGAAAGAGGATCCGAGTAGTTAG 4506 0.4186 MSLEPIPLDRKSSSLRERKQGSSESLGSVARWRGSPSPSHHNRRPHEFNRSGDFRRLAGHRRMGSWQQFPEEREHMFSRSCDKKLEEDNYRPSFSRGEGRYERGNKESRGTFSQREWRGRSSENVNNAPNMSRRQTGASNDRKSVDDMLTYSSRPNSDLVNTWEQHQMKDQHNKMDGVNRFGIGQRCDRDSSMGTVDWKPLKWTRPGSSRDSGFSRSSGMRSLGGTSLLGSCEGKVGLQQKFVTADESYSREAATFRTSSAPSEETNSKKPRLNWGEGLAKFEKKQVEVPEVTSNKDDPVSPPFNMESNNFLSPGLVDKSPKVLGVAGCASPTTLSSTPCSSSPAGADDKLFGKVATLDCDVENSGCSPGPGCQSHLQMFSFNLEKVDIDSLTRLGSSLAELLPQFDNLNSIDCSVLSSTTMNKLMLLKADISKLLEVTETEIDSLETELRSLKSKSEGRFSCSTAIGSLVCCNSKSCDKHVGASDKVAHFEPLQIVSSDDLVVEKTPFSSNLLDNPEPARSKFVEHLPMINAVSRCDVGRYGNCLEDLDGIQSTSVQCLVPCTYRHVANVSSCGNNSSLEVVSSCGDNNSSLEVKNGVDAKSSASFYSSTEDNLYDQIISCNKKIAKEASDVIAKLMPEKCRKNNNIGASSSSCSHDGTFIMEGFAKRRRSARLKERVVTLKFKALQHLWKEDSSLLSTRKHRPKSQKKIELDLRTTNNGHQKKRSSFRFPSPAANKLRLVPTSEMIKYTSQLLSESKHDIHRSTLKMPALILDQKEKMNSMFLSSNGLVEDPLAIEKERAMINPWTSEEKEVFLEKFAAFGKDFQKISTFLDHKTTADCVEFYYKNHKSDCFEKIKKKDDDKVGKFFNAKTELIKWNSEANTSSLEVLRAASVTADGIALNRKMRSGRSLWRGYDNKTMSKGDKIIAEKPNSHAIIQEERETNAAADVLASICDDFHLPEAASSSITSSADPVKGKRVRKSVKARAICKQPPMPVMTQSIDPESCSDESCGEMELTDWTDVEKAAFLHALSSFGKDFAKIAQCVGTRSQFQCRAFFCKTHKRIGMDLMGERAGVVGSPGDDDVDGGRSDADNACIPETASANGSDTSGSKTVVDQPAYDKNLYQEESNPLVARNLSAESDESEEINGKADRKEVNIFSNEYVTGSESKLGTDCNAAALYSFDGPGTVQHQSAIVISDSTEIVKDKPSEGGGAVTELVSDMGTIEPCCSNSAAEGRLVSDGSSGLQGNELEASTVCRVDTDEVVTDVVIELKDNVHNSRTSGNTSLSPVEASCSRLSADAENEPQLCLEKPQFSGLSEGPVTKLNMNMICSSSATELPLLPQKVEQQGPHKSLQCLPNSEDTPNVKIFGKVLTIPSSTQKPNSSAKRNEENGTHDNTGTESAKLKVYDNDFRGIDFNAPIMNSGHGSTVQPAFSPPLPDFNAPYMGCSHGNTIQSGFSSLPASSILLAKYPAAFGLNAQPFIDDDMRRANGSEEKEDPSS* 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0878 1501 MobiDBLite consensus disorder prediction 1373 1405 - -
Mtr6g0878 1501 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1315 - -
Mtr6g0878 1501 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1330 1480 - -
Mtr6g0878 1501 MobiDBLite consensus disorder prediction 117 156 - -
Mtr6g0878 1501 ProSiteProfiles SANT domain profile. 802 853 IPR017884 -
Mtr6g0878 1501 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1330 1480 - -
Mtr6g0878 1501 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1315 - -
Mtr6g0878 1501 SMART sant 803 851 IPR001005 -
Mtr6g0878 1501 SMART sant 1016 1064 IPR001005 -
Mtr6g0878 1501 SUPERFAMILY Homeodomain-like 1018 1066 IPR009057 -
Mtr6g0878 1501 MobiDBLite consensus disorder prediction 1 156 - -
Mtr6g0878 1501 Coils Coil 429 456 - -
Mtr6g0878 1501 MobiDBLite consensus disorder prediction 1373 1387 - -
Mtr6g0878 1501 MobiDBLite consensus disorder prediction 1097 1115 - -
Mtr6g0878 1501 ProSiteProfiles SANT domain profile. 1015 1066 IPR017884 -
Mtr6g0878 1501 MobiDBLite consensus disorder prediction 40 116 - -
Mtr6g0878 1501 MobiDBLite consensus disorder prediction 1076 1115 - -
Mtr6g0878 1501 Pfam Myb-like DNA-binding domain 1019 1060 IPR001005 -
Mtr6g0878 1501 CDD SANT 1020 1060 IPR001005 -
Mtr6g0878 1501 Gene3D - 783 855 - -
Mtr6g0878 1501 SUPERFAMILY Homeodomain-like 790 850 IPR009057 -
Mtr6g0878 1501 MobiDBLite consensus disorder prediction 198 220 - -
Mtr6g0878 1501 Gene3D - 977 1074 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0878 Mtr-Chr6 11199053 11211006 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr6g0878 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0878 - - cam:101505283 1672.52