Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0874 ATGGCTTGTAACACATTGATGAGTTCTGCTATCTCAGCATTTCCATCACTTCTTTCTTCCTCAAAATCAAGATTTTCAACTTCACTTCCACTTCCTTGTACTGCTTCTACAAATGCTTCTTCTAGATTCACCATGACTTCTGATTGGATGCCTGGCCAGCCTAGACCATCTTACCTTGATGGTTCAGCTCCAGGTGACTTTGGGTTTGATCCTCTACGTCTTGGTGAAGTACCTGAGAATCTTGAGAGATTCAAAGAGTCTGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCATTGGGATTAGGCAACTGGGTGAAAGCACAAGAATGGGCTGCACTTCCTGGAGGACAAGCAACCTACCTAGGCAACCCTGTTCCATGGGGCACCCTACCCACCATTTTGGTCATTGAGTTCCTTTCTATTGCTTTTGTTGAGCACCAAAGGAGTATGGAGAAAGACCCTGAAAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAAGACCCTAAAAAGTTCCATGAATACAAAATCAAAGAAGTTAAGAATGGACGTCTTGCTTTGTTGGCATTTGTTGGAATCGTTGTTCAACAAACAGCATATCCAGGAACTGGACCTTTGGAGAATTTGGCTACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATGTCCTTATTCCACCACAATAG 729 0.439 MACNTLMSSAISAFPSLLSSSKSRFSTSLPLPCTASTNASSRFTMTSDWMPGQPRPSYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGIVVQQTAYPGTGPLENLATHLADPWHNNIGNVLIPPQ* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0874 242 Pfam Chlorophyll A-B binding protein 56 210 IPR022796 -
Mtr6g0874 242 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 20 235 IPR001344 GO:0009765|GO:0016020
Mtr6g0874 242 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 20 235 - -
Mtr6g0874 242 SUPERFAMILY Chlorophyll a-b binding protein 39 238 - -
Mtr6g0874 242 Gene3D Chlorophyll a/b binding protein domain 50 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0874 Mtr-Chr6 11162881 11165484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0874 1 197 Chloroplast and Mitochondria Gene Families AT3G54890 79.899 4.74e-108 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0874 K08907 - gmx:100305992 425.631