Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0872 ATGGAGAAGAATATTGACGATCATTCAAACACTTTCCCTCACAAAGATGAGGAAAACAACACCAATGCTAATAACACCCCTCATTCGTTGTCGCCAAAAACCGAAGAAAACGCTAAAGAGGCAAAATCGGATGGTGAGAATGAAAAGGCTAATGATTTAGATCATGTTAAGGGAGAGCCCGAAGAGGGAGATAAGGAGGAGAAGGAGAATGAAGATGTTCTAACATTCGAGGTTACACCAGAGACTCCACCTCCAAACCTGGAGAAGGTTTCAGAAGACATTGATCAATTTCTTGCTACTCCACATGAGAACAATAACAACAATGTCAGTGATAACGAAGAGAAGATTCCTGAATTTGTTGACAAGTTTCTGGATCTCGTGGAAGAGAAAATGGCGAGGTATAAGTCTTGTGAAAAAAAGTGGGGTGAGACTGTGGAGGAAGATTCATCTTTCTTGGAAGACGTGAATCGTGTTTCAAAGCTAATGAAATTGTTGAAGAAACATGCAAAAAAGGATAATTCAATATTGTTTAACCGCGTGGATGCGATTCAACAACGAGCAATGTCGTATTTGGAGGAAGAGTTCCATTTGTTAATGGAAGAATCTAGAGTCGAAAATAAACCGGAACCCAATGGTGCCCATGACTCGAAAGGGAAAAATGTGGCAACACCAGAGTCATCAGAAAATGAACCAATAGAGACTCCTATGGATTTCCCGGGTTTTAAAGATGAGGCCATTACAAATTTGAACAAAATAGCGCGTGAAATGTTATTTGCAGGTTACGATTCAGAGTGTTGTCATGTGTACATTGTTTCTAGAAAGCACAGTTTTGGCGATGGTTTGCACAAGCTTGGGTATGAAAGGATCAGCATCGACGAGGTCCAAAGAATGCAATGGGAATCACTTGAAAGAGAGATTCCAACATGGATTAACACATTTAAAGAATGTGCCACTGTGTGGTTCCCCGGAGAAAGGAAGCTTGTTGCTTCAATTTTCTCTGAGGATCCATCGATGGCAGACACACTCTACACCAACCTGACGCGTGTAGTGGTGTTTCAGCTTCTCAATTTTGCTGAAAGTGTCGCGATGGCAAAACGCGCTGCGGAGAAGCTCTTTAAGTCTCTAGACATGTACGAGACTTTAAGAGATACAATTCCAAACTTGGAAAAACTCTTCCCAAAGGACATTGTCGATGAAATCAAAGCTGAAATGACATCAGCCAAGAATCGACTCGGAGAGGTTGCGGTGTTAATATTTTGCGAACTCGAAAACTCAATAAAAAATGATAATGGAAAAACCCCAGTTGCGGGGGGCGCAATTCATCCGCTAACTCGCTACATAATTAACTATCTACGACTCTCATGTGAGTATAAAGACACATTGGAAGAAGTGTTTCGCGAACATTCAAAAATTGAACGTTCAGATTCAACAAGTAGGCCACGTTATGAAAACGAAAATCAACATTCAAACGAGAAGGAAAATGAGTCACCTTTCACAGGACAATTGACACGTGTAATGGAATTACTGGACACAAATCTTGAAGGAAAAGCTAAGTTGTACAAAGAAGTACCATTAAGTTGCATCTTTATGATGAACAATGGAAGGTACATTGTTCAAAAAATAAAATCTTCAACTGAATTTTATCAAGTGATGGGTGAAACATGGTATCGTAAGAGATCAACAGAGCTGAGAACTTACCACAAAAACTATCAAATAGAAACATGGGGAAAGATATTAAATTGTTTAAGTCCAAAAGGACTAAATGATAATAACGGGAAGGTTCCAAAGCCAGCATTGAAGGAAAGGTTCAAGACTTTCAATACATTGTTTGATGAGATACATAAGACACAAAGCACTTGGGTTATGCATGATGAACAACTTAAATCTGAGCTAAGAGTTTCAATATCATCTCTTGTGATTCCTGCTTATAGATCATTTTTGGGGAGGTTTTCACAATATTTGGATCCAGGTAGACAAACAGAGAAGTATATTAAGTTTCAAGCTGAAGATATAGAGACTTACATTGATGAGTTATTTGATGGGAATCCTAACCATGGCACCATGGCAAGGAGGAGAGCATAA 2082 0.3929 MEKNIDDHSNTFPHKDEENNTNANNTPHSLSPKTEENAKEAKSDGENEKANDLDHVKGEPEEGDKEEKENEDVLTFEVTPETPPPNLEKVSEDIDQFLATPHENNNNNVSDNEEKIPEFVDKFLDLVEEKMARYKSCEKKWGETVEEDSSFLEDVNRVSKLMKLLKKHAKKDNSILFNRVDAIQQRAMSYLEEEFHLLMEESRVENKPEPNGAHDSKGKNVATPESSENEPIETPMDFPGFKDEAITNLNKIAREMLFAGYDSECCHVYIVSRKHSFGDGLHKLGYERISIDEVQRMQWESLEREIPTWINTFKECATVWFPGERKLVASIFSEDPSMADTLYTNLTRVVVFQLLNFAESVAMAKRAAEKLFKSLDMYETLRDTIPNLEKLFPKDIVDEIKAEMTSAKNRLGEVAVLIFCELENSIKNDNGKTPVAGGAIHPLTRYIINYLRLSCEYKDTLEEVFREHSKIERSDSTSRPRYENENQHSNEKENESPFTGQLTRVMELLDTNLEGKAKLYKEVPLSCIFMMNNGRYIVQKIKSSTEFYQVMGETWYRKRSTELRTYHKNYQIETWGKILNCLSPKGLNDNNGKVPKPALKERFKTFNTLFDEIHKTQSTWVMHDEQLKSELRVSISSLVIPAYRSFLGRFSQYLDPGRQTEKYIKFQAEDIETYIDELFDGNPNHGTMARRRA* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0872 693 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 58 684 - -
Mtr6g0872 693 MobiDBLite consensus disorder prediction 16 32 - -
Mtr6g0872 693 MobiDBLite consensus disorder prediction 202 237 - -
Mtr6g0872 693 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 684 IPR004140 GO:0000145|GO:0006887
Mtr6g0872 693 MobiDBLite consensus disorder prediction 1 15 - -
Mtr6g0872 693 MobiDBLite consensus disorder prediction 468 500 - -
Mtr6g0872 693 MobiDBLite consensus disorder prediction 33 75 - -
Mtr6g0872 693 Pfam Exo70 exocyst complex subunit 309 677 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr6g0872 693 Gene3D Exocyst complex component Exo70 132 688 - -
Mtr6g0872 693 SUPERFAMILY Cullin repeat-like 145 680 IPR016159 -
Mtr6g0872 693 MobiDBLite consensus disorder prediction 1 92 - -
Mtr6g0872 693 MobiDBLite consensus disorder prediction 468 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0872 Mtr-Chr6 11131812 11134025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0872 87 693 EXO70 exocyst subunit family AT5G13990 50.866 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0872 K07195 - gmx:100819960 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0609 7 9258815 9261332 Mtr6g0872 6 11131812 11134025 PCT