Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0860 ATGGCTTTAAATAAGACAGGAAAATTGCTAGGTAACAACACCGGAGACGAGCATGGTTTGTTTCCGCAATACACCCAACCAGAAGTATGCAGCAGTGCTGCAAATGTACATAATAATATCCCTAAACAGGTAGGGGGGAAAATTTCTGCGAGTAATGTTCGTGATGGAGTTGGTGGTGGAAGAGTTCTTGACACATCTCGAAATCGTGAGAGTAGGTTTGGGTTGAATAGGGAGAACGGACATGTGAGATACGAAGATCTTACCAATATTTTAGGGTTGAAGAGAATGGACTCTGAAAGTTTTTCTGATATAAGCAATTTTATCCCTAACAAACAGCCAGCAGCACAAGAGATAGAAAACGGTGTTTCTCCGAACATTTTAAGCAAAACTCAAAAGGGAGACGGCGAAAACAGTGGCCTTGGTGCATTGAGGAAGACCTTTAGTGAAACAATTTGCGACAAAACCGGTACTAGACAAGGTGTATCATCGCCCATTTACAGACATGAAAGATCTCACTCCAATGGGTTTTCCGGTTCTGGAACTTTAGACGATTCTTTGTCTGGTGGGAAAATGAAGTTTCTTTGCAGCTTCGGCGGAAAAATATTACCAAGGCCAGGTGATGGTAAACTCAGATATGTTGGTGGAGAAACTCACATTATATCTATTCGAAATGATATTTCGTGGCAAGAGCTTATGAACAAGACTTTAGGTATTTGCAGTCAGCCTCACACGATAAAATACCAACTTCCAGGGGAAGATCTCGATGCTCTAATATCTGTTTCCTCTGACGAGGATCTTCAAAATATGATAGAGGAATACCATGGACTTGAAAGTCGTGAAGGTTCTCAGAAACTTCGAATATTTTTAGTTCCTCTCGGTGAATCTGAAGAGTCACCGTCAGCCAATGGAAACACCGTTCTTCAGAATGACCCTGATTATCAATACTTTGTTGCTTTAAACGGCGTAATAGACCATAGTCCTAAGAAAAACATCAGTGGACCGAGTTTGATCAACGAAGCAAATCATTCAGCGAAAACTTTCAATTTCACCCCAACAGTTACCTCTTCTCCTTTGGAGATCAGGGATGGTAATGGTGGTATGAATGCTTTAAACCTTCAAAGTCCGTTGCGAATTTCTCCTACTCCAGTTCAAGTTGCAGGTTCTAGTACAGGTTATATTCAATTGCTCGGTAACAACTCATGCCAGGGAAGTATTGACAGCAATGCGTCATTTGTTACCGCTCAGATACACTCCGGAAACTCGAGCATTAACACTGCTGATTGCAGATACCCTCAACAACCATCTGTTACTTTGGTAAGTGACTGCCATCCTCGTCAACACGGCAATGTTGGTCAGCCCAATAATCTCAATGGACAGTATTTTGACAACTACAGTAGTGTATATGTTAGCCAAAGTAATGGTTACGGTGATGAAGCTCTCGGTGGAACTTTGCATAAGGATACAATATTCTACTCTGGAAATTCAATCGCTCAACAGACGGAATCTTATGGAACTAATAATGATCCGCCTCATGGGATGCCTCATGCTTTTTCTGATTCGCAGTTGCATGAAAGTGGAGCAAAGTCTGGTTACTGCTCACAAGAAGGAATTACTCCATCTCTCTCCTTGAATCTTGAAAAGTCCCAATTATCTTCGTTGTTAGGTGTCTCGCAAGTGAATCTCACGGAGGGTCAACACGATCCCTTTCTCTATTATCCTCAAATACAAAGTAAGATACCGAATGTGGAGTCGACTGAGATGCACAGATGGCAAGATGCTGCATCTTCTTCCTACTCAGAATCAGTAAGAACGGATGATCGTATTAATGAGGACAGCATTTTATTTGAAAAAAACACCTTAAGTGGATCTGGCTTTGTAGAAAAGGACGTGCGGGAAAATTCTTTGAAACCAGAAAGGATGATGATAAATGAAGAAAAGAATCCCATTCTTAAGAAGGATTACAAGGTTTATGAGGGAAATCCAACTGTTGATTATATGAGTGAATTGTATCTTCTGGATACATTCCCTACTAATAACGTAAGTGCTAAGATTGGTATGCAAAATAATTGGGAACAACCTTGTGTGGACACGAATCCTTTGTCATCTGGCATGATGGGATTCTCGCTAAATAACCTTACAGACAAGACCCCGTCTGATCTTCATAACATCACAAGTGATGGAAGAAACATCGATTTTTCAGCCAGAAACATCGATTTAAATTCTCCTATCCCAAAATGTGCAGAAAGCCCGTGTGACGAAAGTTCTGAAGGAGATCACATGTTCAAGTTTTCCTTTGATCCACATTCTCTTAAATCTGCTCAAAATCAGCCTTCTCAGAATCAGATCGGTACAGGTTTTCACGATAACCCAGCAATAAACTCTGAAAGTTTGTATCCTGCTGTACTTCGTGATGATGTCCGTCCATGTTTGAACTTGCCGGTTGATGGCCTGGATAATTCAAACAAGAATATATCTTTTGTAAAGGCACCTTCGTTTCTCGATGACTTGATTACAAGCATTGATCAAACGGTTGATCAGTTTAAACATGAACATTCTGCCTCTGGACTGTCAAAAGTTGAAGGTGTAATTTTAGAACAATCAAAAAATTTAGAAAGGTGTAATGATGCAAACCGAGTGGAGCCGTTTCTTGTAGTAGATGATGTAACCGGTGTTGTTCCTTCACGTCCTAAGTCTTCACCAGTACACACCTCGCATGATTTTGATGAAGTTGGAAGCGATGTATCTCCATCTCATACAGAAGTAGAGAGCACCGTTCCAGAGTCTGATCCTGAGGATTTTAAAGACGACCAAACCGACGTGAATGACTTCCTTTCTGATGCAATGATAGCAGAAATGGAGGCCAGCATATATGGTTTGCAGATAATTAGGAATGCTGATCTTGAAGAACTTATGGAGTTGGGATCTGGTACCTATGGAACTGTTTATCATGGAAAATGGCGAGGAACCGATGTAGCCATCAAGAGAATTAAAAAGAGCTGCTTTGCTGGAAGATCTTCTGAGCAAGAACGGTTGGCACGAGATTTCTGGAGAGAGGCACAGATCCTGTCAAATCTTCACCATCCCAATGTGCTCGCATTTTATGGTATCGTACCGGATGGTGCTGGTGGAACCTTAGCAACCGTAACAGAATATATGGTTAATGGTTCCCTTAGGCATGTTCTTGTCAAGAACTACAGATTACTAGATCGCCGTAAAAAGCTTATAATTGCCATGGATGCAGCCTTTGGTATGGAATATTTGCACTCGAAGAATATCGTACATTTTGATTTGAAGTGTGACAATTTGCTCGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGTAATACCCTTGTATCTGGTGGTGTGCGAGGAACCCTTCCATGGATGGCACCTGAGCTATTGAATGGTAATAGCAGCCGGGTTTCAGAAAAGGTTGATGTTTTCTCGTTCGGCATCTCCATGTGGGAGTTATTGACAGGAGAGGAACCTTATGCAGATATGCACTGTGGTGCCATTATTGGGGGCATTGTAAAGAACACACTTCGACCACCGATTCCAGAACGATGTGATCCTGAATGGAGGAAACTTATGGAAGAGTGTTGGTCACGTGAGCCCGAATGTCGGCCATCTTTCACCGAGATTACAGGCAGGTTAAGATCTATGTCTATGACCCTTCAAGGAAAGGGAAATTATCAGGCATGGCAGTTGAGACCTAGTAATGACCTTTGA 3765 0.4159 MALNKTGKLLGNNTGDEHGLFPQYTQPEVCSSAANVHNNIPKQVGGKISASNVRDGVGGGRVLDTSRNRESRFGLNRENGHVRYEDLTNILGLKRMDSESFSDISNFIPNKQPAAQEIENGVSPNILSKTQKGDGENSGLGALRKTFSETICDKTGTRQGVSSPIYRHERSHSNGFSGSGTLDDSLSGGKMKFLCSFGGKILPRPGDGKLRYVGGETHIISIRNDISWQELMNKTLGICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGLESREGSQKLRIFLVPLGESEESPSANGNTVLQNDPDYQYFVALNGVIDHSPKKNISGPSLINEANHSAKTFNFTPTVTSSPLEIRDGNGGMNALNLQSPLRISPTPVQVAGSSTGYIQLLGNNSCQGSIDSNASFVTAQIHSGNSSINTADCRYPQQPSVTLVSDCHPRQHGNVGQPNNLNGQYFDNYSSVYVSQSNGYGDEALGGTLHKDTIFYSGNSIAQQTESYGTNNDPPHGMPHAFSDSQLHESGAKSGYCSQEGITPSLSLNLEKSQLSSLLGVSQVNLTEGQHDPFLYYPQIQSKIPNVESTEMHRWQDAASSSYSESVRTDDRINEDSILFEKNTLSGSGFVEKDVRENSLKPERMMINEEKNPILKKDYKVYEGNPTVDYMSELYLLDTFPTNNVSAKIGMQNNWEQPCVDTNPLSSGMMGFSLNNLTDKTPSDLHNITSDGRNIDFSARNIDLNSPIPKCAESPCDESSEGDHMFKFSFDPHSLKSAQNQPSQNQIGTGFHDNPAINSESLYPAVLRDDVRPCLNLPVDGLDNSNKNISFVKAPSFLDDLITSIDQTVDQFKHEHSASGLSKVEGVILEQSKNLERCNDANRVEPFLVVDDVTGVVPSRPKSSPVHTSHDFDEVGSDVSPSHTEVESTVPESDPEDFKDDQTDVNDFLSDAMIAEMEASIYGLQIIRNADLEELMELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLARDFWREAQILSNLHHPNVLAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNYRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPEWRKLMEECWSREPECRPSFTEITGRLRSMSMTLQGKGNYQAWQLRPSNDL* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0860 1254 Gene3D Transferase(Phosphotransferase) domain 1 1055 1250 - -
Mtr6g0860 1254 Pfam PB1 domain 207 291 IPR000270 GO:0005515
Mtr6g0860 1254 MobiDBLite consensus disorder prediction 500 531 - -
Mtr6g0860 1254 CDD PB1_UP2 194 289 - -
Mtr6g0860 1254 Pfam Protein tyrosine and serine/threonine kinase 970 1229 IPR001245 GO:0004672|GO:0006468
Mtr6g0860 1254 MobiDBLite consensus disorder prediction 1 20 - -
Mtr6g0860 1254 SMART serkin_6 967 1236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0860 1254 ProSiteProfiles Protein kinase domain profile. 967 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0860 1254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1092 1104 IPR008271 GO:0004672|GO:0006468
Mtr6g0860 1254 SUPERFAMILY Protein kinase-like (PK-like) 955 1227 IPR011009 -
Mtr6g0860 1254 SMART PB1_new 205 292 IPR000270 GO:0005515
Mtr6g0860 1254 Gene3D - 209 291 - -
Mtr6g0860 1254 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 81 1246 - -
Mtr6g0860 1254 MobiDBLite consensus disorder prediction 901 915 - -
Mtr6g0860 1254 PRINTS Tyrosine kinase catalytic domain signature 1049 1062 IPR001245 GO:0004672|GO:0006468
Mtr6g0860 1254 PRINTS Tyrosine kinase catalytic domain signature 1086 1104 IPR001245 GO:0004672|GO:0006468
Mtr6g0860 1254 PRINTS Tyrosine kinase catalytic domain signature 1157 1179 IPR001245 GO:0004672|GO:0006468
Mtr6g0860 1254 PRINTS Tyrosine kinase catalytic domain signature 1201 1223 IPR001245 GO:0004672|GO:0006468
Mtr6g0860 1254 SUPERFAMILY CAD & PB1 domains 207 293 - -
Mtr6g0860 1254 Gene3D Phosphorylase Kinase; domain 1 960 1054 - -
Mtr6g0860 1254 PANTHER SERINE-THREONINE PROTEIN KINASE 81 1246 - -
Mtr6g0860 1254 MobiDBLite consensus disorder prediction 769 789 - -
Mtr6g0860 1254 ProSitePatterns Protein kinases ATP-binding region signature. 973 998 IPR017441 GO:0005524
Mtr6g0860 1254 CDD STKc_MAP3K-like 973 1230 - -
Mtr6g0860 1254 MobiDBLite consensus disorder prediction 893 936 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0860 Mtr-Chr6 10936055 10943322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0860 189 320 MAP Kinase Kinase Kinase AT1G16270 63.636 2.88e-42 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mtr6g0860 PK_Tyr_Ser-Thr 3.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0860 - - gmx:100790135 1534.24