Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0851 ATGGTGAATCCAATAAAAGCAGCAATAGGAGATTTTGTGTTGACTTTTACATGGATGTTTATATCTTCAACACTTGGATTAGTCACAACAGAAATTATGAAAGCTTTTGATCTTCAATTTGTGACATATAATGGTGTTAATTATCCTTTTATTATAATTACAACATTGCTAATATTCATAATTATCTTTACTTTTACTGCCATTGGTAATGCTTTGGGTGGTGCAAGTTTTAACCCTACAGGAAATGCTTCTTTCTATGCTGCTGGTCTTGGTTCTGATACTCTTATCTCTATGGCTATTCGTTTCCCTGCTCAGGCATTAGGTGCAGTGGCTGGTGCTAAGGCAATTAAGGAAGTAATACCGCCAAAATATAGTCACATGATTGGAGGACCTGCTTTGAAGGTTGATTTGCATACTGGAGCTATAGCAGAAGGAGTGTTGACATTTTCAATCACTTTTGCTGTTCTCTTCATCTTGCTCAGAGGTCCTCGTAGTGAGTTCATGAAGACTTTGTTGATGTCCATGTCGACCGTAGCTGTGATTCTCATCGGTTCTGCTTACACCGGACCATCAATGAATCCTATCCTTGCATATGGTTGGGCATACTTAGACGACTGGCACCACACATGGGATCAACTTTATGTTTACTGGATTTGTCCATTCATTGGAGCAATACTTGCTGCTTGGATTTTTCGTGCTGTTTTCCCACCACCACAAGTGGTAAAAAAACAGAAAAAGCGTAAAGAGGCATAG 753 0.3918 MVNPIKAAIGDFVLTFTWMFISSTLGLVTTEIMKAFDLQFVTYNGVNYPFIIITTLLIFIIIFTFTAIGNALGGASFNPTGNASFYAAGLGSDTLISMAIRFPAQALGAVAGAKAIKEVIPPKYSHMIGGPALKVDLHTGAIAEGVLTFSITFAVLFILLRGPRSEFMKTLLMSMSTVAVILIGSAYTGPSMNPILAYGWAYLDDWHHTWDQLYVYWICPFIGAILAAWIFRAVFPPPQVVKKQKKRKEA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0851 250 Pfam Major intrinsic protein 5 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr6g0851 250 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr6g0851 250 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr6g0851 250 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr6g0851 250 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr6g0851 250 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr6g0851 250 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr6g0851 250 PANTHER AQUAPORIN SIP1-1 3 245 - -
Mtr6g0851 250 PANTHER AQUAPORIN SIP1-1 3 245 IPR044222 GO:0015250
Mtr6g0851 250 SUPERFAMILY Aquaporin-like 4 239 IPR023271 -
Mtr6g0851 250 Gene3D Glycerol uptake facilitator protein. 2 248 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0851 Mtr-Chr6 10815278 10819931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0851 2 246 Major Intrinsic Protein MIP AT5G18290 52.632 3.31e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0851 K09875 - gmx:100788738 332.798