Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0849 ATGGAAGAACAAGAACCTATTGTGGTGAACAAAAGTGATGAACCTCTTGATTTACCTGCTGGTTTCAGATTCCACCCTAATGATGATGAAATCATTACTTTTTATTTGCTTAAAAAGGTATTGAATAGTAATTTTAGTGCAATTGCAATTGGTGAAGCTGATTTGAATAGGTGTGAGCCTTGGGATTTACCAAAGAAAGCTAAGATGAGAGAGAAAGAATGGTATTTCTTTTGTCAAAGAGATAGGAAGTATCCAACTGGAACAAGAACTAATAGAGCAACTGAATCAGGCTATTGGAAAGCAACTGGAAAAGATAAAGAGATCTACAAAGGGAAAAGTAACCAACTTGTTGGTATGAAGAAAACTCTTGTGTTCTATAAAGGTAGAGCTCCAAGAGGAGAGAAAACCAATTGGGTCATGCATGAATTTAGATTGGATGGACAATTATCAACTTGCAACCTTCCTAGTGATGCAAAGGATGATTGGGTTGTGTCAAAGATTTTCATCAAGAACAACATTGAAGTTAAAAAGACTACTTCATTTTCCAATCTTTTAAGGATGAACTCAATAGGTGATGATTTATTGGATTTTTCTTCACTCCCACCTCTTGTGGATCCTCCTTTTAGCAACAATACCATTGATGATCATGACTTCAAAGGAATCAATTCATCACCTTCATCATCAAATGGTTATTGTTTTCCAAGCTACTTAATGAACAATGAAATTAATCTCACAAATAATTATCATGCTACCAACCAAGGGAATTTCAATGGTCCATTAATGCAAAGTAGCTCATCTTCATCACATCAACTTCAACCTCAAATCCAAATTCCAAACACACCCTTGAATGAGAACATGTTATCAAATTATTCTTACATGAATCAAGGGAATAATAACAATGGTTACATTTATGGATTGGAAAATAAAGAGTGCAAGATGGAGCAATTCTCTACCAACAATTCTATGGTGAGCATTTCACAAGACACATGTTTGAGCAATGACATAAACAATGAAACATCATCTGTGGTCTCAAAGCAGGAAATTGGAAGGAATGCAACATTGTATGAAGAACTTGAGGGACCTTCATCAATTGGTCCCCTCTCAAATCTTGAATCATGGGAATGGCTATTGAAGAGTTAA 1140 0.3526 MEEQEPIVVNKSDEPLDLPAGFRFHPNDDEIITFYLLKKVLNSNFSAIAIGEADLNRCEPWDLPKKAKMREKEWYFFCQRDRKYPTGTRTNRATESGYWKATGKDKEIYKGKSNQLVGMKKTLVFYKGRAPRGEKTNWVMHEFRLDGQLSTCNLPSDAKDDWVVSKIFIKNNIEVKKTTSFSNLLRMNSIGDDLLDFSSLPPLVDPPFSNNTIDDHDFKGINSSPSSSNGYCFPSYLMNNEINLTNNYHATNQGNFNGPLMQSSSSSSHQLQPQIQIPNTPLNENMLSNYSYMNQGNNNNGYIYGLENKECKMEQFSTNNSMVSISQDTCLSNDINNETSSVVSKQEIGRNATLYEELEGPSSIGPLSNLESWEWLLKS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0849 379 SUPERFAMILY NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
Mtr6g0849 379 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Mtr6g0849 379 Gene3D NAC domain 27 174 IPR036093 GO:0003677|GO:0006355
Mtr6g0849 379 ProSiteProfiles NAC domain profile. 18 170 IPR003441 GO:0003677|GO:0006355
Mtr6g0849 379 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 330 - -
Mtr6g0849 379 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 10 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0849 Mtr-Chr6 10793956 10796485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0849 4 349 NAC Transcription Factor Family AT5G18270 50.556 7.10e-107 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr6g0849 NAM 1.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0849 - - cam:101514407 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2244 7 38834050 38835443 Mtr6g0849 6 10793956 10796485 PCT