Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0845 ATGTACTACCATCATCATCATCAGCAGCAGCAACAAGCAAGGAACATGCATGCTTTGAGGATGCACATGCAAGGAGGAGGAAATGGAAGTTCAGATTCAGGACTTGTTCTTTCAACTGATGCTAAGCCAAGACTAAAATGGACACCAGATCTTCATGAACGTTTCATTGAAGCAGTCAATCAACTTGGTGGAGCAGATAAAGCTACACCAAAAACAGTTTTGAAACTTATGGGAATTCCTGGACTTACATTATACCATTTAAAGAGTCACCTACAGAAATACAGGATCAGTAGAAGCATGAATGGACAAACAAATACTGGCAGCAGTAAAATTGCACCAACTTCAGAAGTAGTGACAAGCAGAATGTCAGAATCAAGTGGAATTCATATGAAAGATTTAAACATAGGACTCCAAACAAACAAAAATTCAGATATAAATGAAGCATTAAATATGCAAATTGAAGTGCAAAGAAGATTACATGAGCAGCTTGAGGTACAACGACACTTACAACTACGGATAGAGGCTCAAGGGAAGTACCTTCAATCAGTGCTTGAAAAAGCTAAGGAAACACTAGGAAGACAAAATTTAGGAGCTATGGGACTTGATGCTGCAAAGGTTCAACTATCTGAATTAGCATCAAGAGTATCCACTGAAAACCTTGATTCCAAATTTTCAGAACTAAAAGAAATGAATGTACTTTGGGCTCAACAAACACAAGAAGGTGAGACCATTGATTATTCAATGGGGAGTTTCTTAACCAATAGTGAGGACTCTCAAAGAGACCAAGAAATACATAACAAGAGCATGAATTTTAGAGCATATAATGGCACATTGTGTGAAGAAGTGAAGGAGAATATGATGTTTCTTTCCTCATCAAATGATAAAGTACTAAAGGGATCGGATGAAGTACCAGAAAGGACGTCAAGCCTCTTGTCTATGAATATAGGAGTTCATGAAGAAGAAAACTTTTGGCGGAGAAATATTTCAAAGGAAGATTTAGAGGGTGAAGAATGGAAAAGAAGAAAAAGTATTGACACTAGTGGAGTGCAACTTAAACTTAATAGTGACAAAATTTCTCAAGATTATAGACTAGCAAACTTTGATATGAAATTAGACTTGAATTCCCATGATGACAATGGTGCTTCTTCTCACAGCCAAAAATTTGACTTGAATGGTTTCAGCTGGAATTGCTAG 1194 0.3693 MYYHHHHQQQQQARNMHALRMHMQGGGNGSSDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISRSMNGQTNTGSSKIAPTSEVVTSRMSESSGIHMKDLNIGLQTNKNSDINEALNMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAKETLGRQNLGAMGLDAAKVQLSELASRVSTENLDSKFSELKEMNVLWAQQTQEGETIDYSMGSFLTNSEDSQRDQEIHNKSMNFRAYNGTLCEEVKENMMFLSSSNDKVLKGSDEVPERTSSLLSMNIGVHEEENFWRRNISKEDLEGEEWKRRKSIDTSGVQLKLNSDKISQDYRLANFDMKLDLNSHDDNGASSHSQKFDLNGFSWNC* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0845 397 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 8 396 - -
Mtr6g0845 397 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 96 IPR006447 GO:0003677
Mtr6g0845 397 Coils Coil 146 166 - -
Mtr6g0845 397 Pfam Myb-like DNA-binding domain 44 95 IPR001005 -
Mtr6g0845 397 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 396 IPR044848 GO:0003700
Mtr6g0845 397 Gene3D - 41 99 - -
Mtr6g0845 397 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Mtr6g0845 397 Pfam MYB-CC type transfactor, LHEQLE motif 144 189 IPR025756 -
Mtr6g0845 397 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0845 Mtr-Chr6 10769494 10773136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0845 74 396 G2-like Transcription Factor Family AT3G04030 45.614 3.53e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr6g0845 Myb_DNA-binding 4.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0845 - - mtr:MTR_6g032990 774.622