Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0822 ATGAATGATCTTCTAACGGAATCATTTGAGATCCCTCGTGGTCGTGGAGGTGGTGACATTGAGTTGGGAGAATATGGAAGGAATTCAGGAGAGCTTGGCTTGGATAGTTTCTTCAAAAAGGTTCAGGAGCTTGAGAAACAATATGTGAAGCTCGATAACCTTTTGAGAAAGCTCCAGGATGCCCATGAGGAGACCAAGGCTGTGACCAAAGCTCCTGCCATGAAGGCTATAAAGCAGAGAATGGAGAAGGATGTTGATGAAGTTAAGAAAACTGCATATTTCTTAAAGACCAAAGTTGAAGAGCTGGACAAAGAGAATTTGGCTAATAGGCAGAAGCCTGCTTGTGGAAAAGGATCGGCTGTTGACCGGTCAAGAACAGCAACGACAATTGCCTTGAAAAAGAAACTGAAGGAGAAGATGGCTGAATTTCAGATCCTGAGAGAAGCCATCCATGAAGAATATCGTGAGGTTGTTGAGAGACGCGTATTTACAGTAACCGGCGCGAGAGCTGATGAGGAGACAATTGACAGATTAATTGAGACCGGTGACAGCGAACAAATTTTCCAGAAGGCTATTCAGGAACAAGGACGAGGCCAGGTAATGGACACCCTAGCAGAAATTCAAGAACGACACGAAGCAGTCAGGGATGTTGAGAGGAAATTGCTTGATTTACAACAGACATTTATGGATATTGCAGTGTTAGTTGATGCACAAGGCGACATGCTTGACAACATAGAATCACAGGTTTCAAGTGCAGTAGATCATGTGCAGCAAGGAAATAATTCCCTCCAAAAGGCAAAGAAAATGCAAAGAAACTCAAGAAAATGGATGTGTATTGCCATCATGATACTTCTCATTGTTGTTGTAATCATTGTTGTTTCTGTCATCAAACCCTGGGTTACCAAAAAGGGTGCATAG 918 0.4281 MNDLLTESFEIPRGRGGGDIELGEYGRNSGELGLDSFFKKVQELEKQYVKLDNLLRKLQDAHEETKAVTKAPAMKAIKQRMEKDVDEVKKTAYFLKTKVEELDKENLANRQKPACGKGSAVDRSRTATTIALKKKLKEKMAEFQILREAIHEEYREVVERRVFTVTGARADEETIDRLIETGDSEQIFQKAIQEQGRGQVMDTLAEIQERHEAVRDVERKLLDLQQTFMDIAVLVDAQGDMLDNIESQVSSAVDHVQQGNNSLQKAKKMQRNSRKWMCIAIMILLIVVVIIVVSVIKPWVTKKGA* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0822 305 CDD SynN 34 191 IPR006011 GO:0016020
Mtr6g0822 305 Pfam SNARE domain 240 292 IPR000727 -
Mtr6g0822 305 Gene3D - 194 297 - -
Mtr6g0822 305 PANTHER SYNTAXIN 3 297 IPR045242 -
Mtr6g0822 305 SMART SynN_4 29 155 IPR006011 GO:0016020
Mtr6g0822 305 Pfam Syntaxin 36 239 IPR006011 GO:0016020
Mtr6g0822 305 Gene3D - 34 162 - -
Mtr6g0822 305 CDD SNARE_syntaxin1-like 203 265 - -
Mtr6g0822 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Mtr6g0822 305 PANTHER - 3 297 - -
Mtr6g0822 305 Coils Coil 34 71 - -
Mtr6g0822 305 SUPERFAMILY t-snare proteins 33 259 IPR010989 GO:0016020|GO:0016192
Mtr6g0822 305 SMART tSNARE_6 199 266 IPR000727 -
Mtr6g0822 305 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0822 Mtr-Chr6 10496021 10500331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0822 1 305 SNARE and Associated Proteins AT3G03800 73.529 1.41e-157 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0822 K08486 - gmx:100306329 514.227