Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0806 ATGGAAAATAAGCTCCATCCAAAAGTGATTCTGGTTTTACTTACAATTTTCCTTTCAACTTCTCACTCAACTGAACTTCAATCCTCTCACACTCACACTCTTTTGCGAATCAAACGCCTATTAAACTTTCCTTCGGTTTTAAGCAGTTGGAATTCCAACACTGATTTTTGCAACACAGATTCAAAAGCTTCTCAAACTGTTGTATGCTATGGAGAAGCCATAACTCAGCTACACATAGTTGGTGAAACAACAAAACCTCAACAAATTCTTCCAAAAAACTTCTCAATAGATTCATTTTTCACAACACTTTTGAGAATTCCAAGTCTAAAAGTCCTCACACTAGTTTCCTTAGGCTTGTGGGGTCCACTTCCTGGAAAAATTGGTAGTTTATCATCTTTGGAAATAGTTAACATGAGTTCAAATTTTCTTTATGGTAAAATCCCTCAAGAGCTTCCATTGTTATCAAATCTTCAAGCACTCATTCTTGATAACAATATGTTTGAAGGACATTTACCTGATTGGTTGGATTCTTTTCCGTCGTTAACCGTTTTGAATTTGAAACAAAATCTATTCAACGGTTCACTTCCTGATTCGTTGAGTAGCTTAACGAATATGAGAGTTCTTTCGCTTTCTCGTAACCGTTTTACCGGATCGGTACCGGATTTAAGCCGTTTGATTAATCTTCAAGTGTTGGAATTGGATGATAATGGTTTTGGACCAAACTTTCCTAGAATTGGTAACAAGTTGGTTACTTGTGTTCTAAGAAACAACAAGTTTAGGTCTAGTTTACCTGATAATATGAGTTCTTATTATCAACTTGAGAGATTCGACATCTCGGAAAACGCGTTTGTTGGACCATTTCAGTTAGAATTGTTTTCACTTCCAACAATCACTTATCTCAACATTTCAAGTAACAAATTATCAGGAATGCTTTTCGAGAATCTTTCTTGCAATTCTGTACTAGAAGCTGTTGATTTGTCTTCAAATCTTTTGACTGGAAAATTGCCAAAGTGCTTAGTGTCACATTCCAATGATAGGACTGTTTTGTATGGCGGAAATTGTCTAGAGGAGACAAAACAAAATCAACATGAACAAGCTTTTTGTCACACTGAAGCAATAGCTGTTGGAATAGTAGCTGAGAGAAAGAAGCGTAAAGGAGTATCTAAAACAGTTCTTTCTTTGGCGATAGTAGGTGGAATTTTTGGAGGACTTGCACTTTTTGCATTGATTTTTACTATTATGATTAGAAGAGGAAATGGTAAAAGCATGATGATGAATTCTCAGACAAAATTAATATCAGAAAATGCAGCTTCCGGATACACTTCTAAGTTAATCTCCGATGCAAGGTATGTACCTAAAACAATGAAGTTTGGAACTGTTGGACTTCCACCTTATAGAGCTTTTTCACTGGAAGAGATTATGGAAGCTACTAATAACTTTGATACCACTTCTTTTATGGGTGAAGGTTCTCAAGGACAGATGAATAGAGGACAACTAAAGGAGGGTTCACTAGTTGCCATTAGAAGTGTAAAATTGACCAAAAGCTGCAGGACTAGAGATTTCATGCAGCACATAGAAATGATATCAAAATTCAGGCATCAACATTTAGTCAGTGTTCTTGGACATTGCTTTGAACATTATTTAGATGATTCAAATGTCAGAAGAATCTTTATTGTCTTTGAGTATGTACCAAATGGCTCACTCAAGACATGGATCTCAGATAGGCATTATAGAAAGTCTCTTACTTGGAATCAACGCATAGAAGCAGCGATTGGAGTGGCAAAGGGAATCCAATTTTTGCATACAGAGATTGTTCCTGGTGTATATTCAAACAATATCAAAATCACAGATGTTTTATTGGACCAAAACTTTGTTGCGAAAATCAGTGGTTATAACATGCCTTTGTTATCCAACATGGGAAAGGTTGGTCAAGGAAATCCTTCAAGTATATTCAAAAGTCCTAGCTTAAAACAAAATGTAAAAAGTGAAGACAAGTCTGATATATATGACTTTGGTGTGATCCTAATGGAACTCATTCTAGGAAGGACGATAAAGTTGAGAAATGTGGACACTTTGAAGGATCTGTTGCAATCAAGCATAACAGAAGATGATGAAGCTAGGAGGAGCATTATCGATCCATCGATACGTAATGCGTGTTTGGATCAATCATTGAAGACAATGATGGAAATTTGTGTGAGATGTTTAGTTAAAGAGGTAGAAGAAAGGCCTTCTATAGAAGATGTTTTATGGAATTTGCAGTTTGCTTCTCAAGTCCAAGATGCATGGAGAGGAGACTCTCTAAGTAGTGACGGCTCTCCCATCTCGCCTTTACCGTGTCGACGAGCAAACTTCCATTAG 2358 0.3651 MENKLHPKVILVLLTIFLSTSHSTELQSSHTHTLLRIKRLLNFPSVLSSWNSNTDFCNTDSKASQTVVCYGEAITQLHIVGETTKPQQILPKNFSIDSFFTTLLRIPSLKVLTLVSLGLWGPLPGKIGSLSSLEIVNMSSNFLYGKIPQELPLLSNLQALILDNNMFEGHLPDWLDSFPSLTVLNLKQNLFNGSLPDSLSSLTNMRVLSLSRNRFTGSVPDLSRLINLQVLELDDNGFGPNFPRIGNKLVTCVLRNNKFRSSLPDNMSSYYQLERFDISENAFVGPFQLELFSLPTITYLNISSNKLSGMLFENLSCNSVLEAVDLSSNLLTGKLPKCLVSHSNDRTVLYGGNCLEETKQNQHEQAFCHTEAIAVGIVAERKKRKGVSKTVLSLAIVGGIFGGLALFALIFTIMIRRGNGKSMMMNSQTKLISENAASGYTSKLISDARYVPKTMKFGTVGLPPYRAFSLEEIMEATNNFDTTSFMGEGSQGQMNRGQLKEGSLVAIRSVKLTKSCRTRDFMQHIEMISKFRHQHLVSVLGHCFEHYLDDSNVRRIFIVFEYVPNGSLKTWISDRHYRKSLTWNQRIEAAIGVAKGIQFLHTEIVPGVYSNNIKITDVLLDQNFVAKISGYNMPLLSNMGKVGQGNPSSIFKSPSLKQNVKSEDKSDIYDFGVILMELILGRTIKLRNVDTLKDLLQSSITEDDEARRSIIDPSIRNACLDQSLKTMMEICVRCLVKEVEERPSIEDVLWNLQFASQVQDAWRGDSLSSDGSPISPLPCRRANFH* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0806 785 Gene3D Phosphorylase Kinase; domain 1 447 562 - -
Mtr6g0806 785 Pfam Protein tyrosine and serine/threonine kinase 485 749 IPR001245 GO:0004672|GO:0006468
Mtr6g0806 785 Pfam Leucine rich repeat 155 215 IPR001611 GO:0005515
Mtr6g0806 785 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 6 771 - -
Mtr6g0806 785 SUPERFAMILY L domain-like 31 356 - -
Mtr6g0806 785 Gene3D Ribonuclease Inhibitor 27 247 IPR032675 -
Mtr6g0806 785 Gene3D Transferase(Phosphotransferase) domain 1 563 766 - -
Mtr6g0806 785 Gene3D Ribonuclease Inhibitor 248 373 IPR032675 -
Mtr6g0806 785 ProSiteProfiles Protein kinase domain profile. 480 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0806 785 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 771 - -
Mtr6g0806 785 SUPERFAMILY Protein kinase-like (PK-like) 460 756 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0806 Mtr-Chr6 10181198 10187308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0806 43 773 Miscellaneous Gene Families AT3G03770 60.705 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mtr6g0806 PK_Tyr_Ser-Thr 2.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0806 - - gmx:100813207 1152.89