Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0805 ATGGCTGAGTCACAAGGTGGTAATGGTAGTAGTTCGGGAAACAGGCGCAACAAAAGCGCAAATGCTGCTGCAAAGCGTGCAATAGCAAGAGCAACACAAGATGAACCGGTTATTACGCCGTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGTAGTAGTGGATGCATCTTTGCACCCTACTTTGGTACTGACCAAGGTGCGGCTAAGTTTGCGGCTGTGCACAAGGTGTTTGGTGCTAGTAATGTGTCGAAGCACTTGTCCAACATTCCGGCTAGCCATCGCCATGAAGCTGCTGCAACAATTTCCTATGAGGCTCAAGCTAGGCTAGCTGATCCAGTTTATGGCTGTGTGTCCACCCTTCTTGCTTTGCAGCAACAGGTGGCAGCTATGCAAGCAGAGGTCTCGATGATGCAAACTCAGTTGATGAATAGGAGGCTTGCATATGCAAATGCAAGTACTCTTCAAGCCCCATATCAGCCGCCATTTCAATTGGTACAGCAACCAAACTTCAATGTACCTGTGCAGCCAGCATATTCCAACAACTCATCTGCTTCCACCACCAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGGCCTCACAATGGAGACAGCACCTTCATCACAGAGCTTAGAGCCTTTTCAAAGCTCCAGGATGTCTCGTTTTGAGAAAGATGATTAA 684 0.4766 MAESQGGNGSSSGNRRNKSANAAAKRAIARATQDEPVITPCGACKFLRRKCSSGCIFAPYFGTDQGAAKFAAVHKVFGASNVSKHLSNIPASHRHEAAATISYEAQARLADPVYGCVSTLLALQQQVAAMQAEVSMMQTQLMNRRLAYANASTLQAPYQPPFQLVQQPNFNVPVQPAYSNNSSASTTNLMNMNNFNPGFGLTMETAPSSQSLEPFQSSRMSRFEKDD* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0805 227 PANTHER LOB DOMAIN CONTAINING PROTEIN 9 213 - -
Mtr6g0805 227 MobiDBLite consensus disorder prediction 1 19 - -
Mtr6g0805 227 MobiDBLite consensus disorder prediction 200 218 - -
Mtr6g0805 227 ProSiteProfiles LOB domain profile. 39 141 IPR004883 -
Mtr6g0805 227 MobiDBLite consensus disorder prediction 1 26 - -
Mtr6g0805 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 9 213 - -
Mtr6g0805 227 Coils Coil 120 140 - -
Mtr6g0805 227 MobiDBLite consensus disorder prediction 200 227 - -
Mtr6g0805 227 Pfam Lateral organ boundaries (LOB) domain 40 138 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0805 Mtr-Chr6 10175766 10177422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0805 39 187 AS2 family AT3G03760 69.128 5.45e-64 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr6g0805 LOB 3.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0805 - - aprc:113866578 253.062