Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0783 ATGAGTTCACTAAACTTGAACAATGATGGTTATGGTTTCTCTTTGGACTTGAATATTTCTTCCCTTCCATCTCCACTTCCTTCTTCATCTTCTACTCCTCTTTTGGGTCATATCGGTAACAATGAATCTAGAAAGTTCAAAATACCCTTTGGGATTTCTAACCCTTCAGTGATCCTTCCTAATGAGAGCATGGTCAAAAATAATGAAGGGAATTTTGGGGATGAGAGAAAGAACTTGTCTATGAAAGGTTACAAGGAAGAAAATGAGAAATTTGGGAACACCAAGCTTTCCATTAGAGGTCATTGGAGACCATCTGAAGATGCTAAGCTTAAAAAACTTGTTGATGAATTTGGTCCTCACAATTGGAACAACATTGCTGAACAAATACATGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTGTAATCAGCTAGATCCTAGAATTAATAGAGCAGCTTTTAGTGAGGAAGAAGAGGAGAAGCTTTTGCATGCTCATACACTTCATGGTAACAAATGGTCACACATTTGCAAATTCTTTCCTGGAAGGACAGACAATGCACTGAAGAATCATTTTCATGTGATTATGGCTAGGAAGCAAAGGGAACTATTATCATCTATTTCAAGAAAGAGAAAGCTAACATTTCAAATCCCAGCAAATAATAATGTAGCTAGCAAATCAGCAATCACAAGTCCCTTTGATGAATCTAACTCAACTTGCACCAATCTCAACCTCACTACTAGGCCTTTGCTTAATTACCATGCCTATGGTTCACAAATGAGCTTACTTAGAGAAAGAAAGGTAGAAGCAGTGGACTATGGTTTTGCCAAAATTTGCAGTGCAATGAGAGGTTGTTCTCAAGGTCACATGGGAAAACTTAAGAGTGTGGACCAATCCAATCATTCATATTCAAACTCAGAAGTTTCAGTATCTGAGTCAGTTGCAACAAACATGAACAATGGATCAATTTTGGGGGAAAGTGAAAATGTTAGAGATAAGATTAAGGTGTCATTTATTGACTTTCTTGGAGTAGGTGATACATATGGAACTTTTTGTTGA 1059 0.373 MSSLNLNNDGYGFSLDLNISSLPSPLPSSSSTPLLGHIGNNESRKFKIPFGISNPSVILPNESMVKNNEGNFGDERKNLSMKGYKEENEKFGNTKLSIRGHWRPSEDAKLKKLVDEFGPHNWNNIAEQIHGRSGKSCRLRWCNQLDPRINRAAFSEEEEEKLLHAHTLHGNKWSHICKFFPGRTDNALKNHFHVIMARKQRELLSSISRKRKLTFQIPANNNVASKSAITSPFDESNSTCTNLNLTTRPLLNYHAYGSQMSLLRERKVEAVDYGFAKICSAMRGCSQGHMGKLKSVDQSNHSYSNSEVSVSESVATNMNNGSILGESENVRDKIKVSFIDFLGVGDTYGTFC* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0783 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 200 IPR017930 -
Mtr6g0783 352 SMART sant 150 198 IPR001005 -
Mtr6g0783 352 SMART sant 98 147 IPR001005 -
Mtr6g0783 352 CDD SANT 153 193 IPR001005 -
Mtr6g0783 352 ProSiteProfiles Myb-like domain profile. 99 145 IPR001005 -
Mtr6g0783 352 Pfam Myb-like DNA-binding domain 102 162 - -
Mtr6g0783 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 145 IPR017930 -
Mtr6g0783 352 PANTHER MYB PROTEIN-RELATED 67 347 - -
Mtr6g0783 352 Gene3D - 152 217 - -
Mtr6g0783 352 ProSiteProfiles Myb-like domain profile. 146 196 IPR001005 -
Mtr6g0783 352 Gene3D - 98 150 - -
Mtr6g0783 352 PANTHER OS08G0435700 PROTEIN 67 347 - -
Mtr6g0783 352 SUPERFAMILY Homeodomain-like 98 192 IPR009057 -
Mtr6g0783 352 CDD SANT 102 143 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0783 Mtr-Chr6 9868135 9870579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0783 99 243 MYB Transcription Factor Family AT1G69560 59.310 1.24e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr6g0783 Myb_DNA-bind_6 4.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0783 K09422 - qsu:111993092 278.485