Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0782 ATGAGTTCGCTAAACTTGAACAATGATGGTTATGGTTTGTCTTTGGACTTGAAAATTTCCCTTCCATCTCAACTTCCATCATCATCTTCTACTCACCTTCAGGGTCATGTTGGTAACAATGGTTTTGAAAAGTCCAAAATACCCTTTGGAATTTCGAACCCTTTGGTGATCCAACCTAATGAGAACGTGGTCCAAAACAATGGAGGGAGTTTTAGGAACTCTAAGCTTTCCAAAGCTCATTGGAAACCATTTGAAGATGATAAGCTTAAACAACTTATCGCTGACCATGGTGCTAAAGATTGGAACAACATTGCTGAAAAACTACAAGGAAGATCAGGGAAAAGTTGTAGATTAAGGTGGCTTAATCACCTAGATCCTAGCATCAAAAGAGAACCTTTAAGTAAGGAAGAAGAGGAGATGCTTTTGCAGCTTCATACACTTCATGGTACCAAATGGGCACACATTTCCAAACATTTTCCAGGAAGGAGAGACAATGCACTAAAGAATCATTACCATGTGATCAAGGCTAGGAGGCAAAGGGAACTCCTATCATCTATTGCAAGAAAGGAAAAGCTAACATATGAAATCCCAGCAAAATTTGCCATCACAAGTCCCATTGATGAATCCAATCTCAACCTCACTAGGCCTTTACCTAGTTCTCAAATGGGTTTACTTCAAAAAAGAGTGGTAGAAGCTGAATTTGCCAAAGCTTGCAGTGCTATGAGAGAGCTTAACAATGTGTACCAGATGGAAAAGCTTAAGATTGCGGACCAATCCAATATTTCAGATTCAAACTCAGAAGGTTCAACATCTGAGTCTGCTGCAACAAACATGAACAATAATGGATCAATTTTAGGGGATAGTGAAAATGTGGGAGATAAGATTAAGATGCCATTTTTTGACTTTCTTGAAATAAGTGATACATAG 927 0.3862 MSSLNLNNDGYGLSLDLKISLPSQLPSSSSTHLQGHVGNNGFEKSKIPFGISNPLVIQPNENVVQNNGGSFRNSKLSKAHWKPFEDDKLKQLIADHGAKDWNNIAEKLQGRSGKSCRLRWLNHLDPSIKREPLSKEEEEMLLQLHTLHGTKWAHISKHFPGRRDNALKNHYHVIKARRQRELLSSIARKEKLTYEIPAKFAITSPIDESNLNLTRPLPSSQMGLLQKRVVEAEFAKACSAMRELNNVYQMEKLKIADQSNISDSNSEGSTSESAATNMNNNGSILGDSENVGDKIKMPFFDFLEISDT* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0782 308 CDD SANT 134 175 IPR001005 -
Mtr6g0782 308 CDD SANT 81 124 IPR001005 -
Mtr6g0782 308 ProSiteProfiles Myb-like domain profile. 125 175 IPR001005 -
Mtr6g0782 308 Gene3D - 132 193 - -
Mtr6g0782 308 ProSiteProfiles Myb-like domain profile. 73 124 IPR001005 -
Mtr6g0782 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 179 IPR017930 -
Mtr6g0782 308 Pfam Myb-like DNA-binding domain 81 141 - -
Mtr6g0782 308 Gene3D - 78 129 - -
Mtr6g0782 308 MobiDBLite consensus disorder prediction 259 287 - -
Mtr6g0782 308 PANTHER MYB PROTEIN-RELATED 63 308 - -
Mtr6g0782 308 SUPERFAMILY Homeodomain-like 77 171 IPR009057 -
Mtr6g0782 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 128 IPR017930 -
Mtr6g0782 308 PANTHER OS08G0435700 PROTEIN 63 308 - -
Mtr6g0782 308 SMART sant 129 177 IPR001005 -
Mtr6g0782 308 SMART sant 77 126 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0782 Mtr-Chr6 9864171 9865653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0782 70 305 MYB Transcription Factor Family AT4G33450 37.705 3.48e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr6g0782 Myb_DNA-bind_6 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0782 K09422 - gmx:100791795 199.134