Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0781 ATGGTCCAAAACAATGGAGGGAATTTTAGGAACACTAAGCCTTCCAAAGCTCATTGGAAACCATCTGAAGATGCTAAGCTTAAACAACTTATCGCTGATCATGGTGCTAAAAATTGGAACAACATTGCTGAACAACTACAAGGAAGAACAGGGAAAAGTTGTAGATTAAGGTGGCTTAATCACCTAGATCCTAGCATCAAAAGAGAACCTTTAAGTAAGGAAGAAGAGGAGATGCTTTTGCAGCTTCATACACTTCATGGTACCAAATGGGCACACATTTCCAAACATTTTCCAGGAAGGAGAGACAATGCACTAAAGAATCATTACCATGTGATCAAGGCTAGGAGGCAAAGGGAACGTACAAAAGTTTTAGGCAAAAAGAGGAGCAATGAAGACAATGGTATAAATGGAAAATGCAAAACAGTGGAAGGGATGAATGTGGTACACACTCGTAGGAACCCTTGGGACTCTCCACCAGCTCCCATGGGTGTAACGCCTCCGCTTGGTGGGCATGTAACACCCGAGGCTGATGAGGGCGGGGAGTGGTCCGGCTCCTGGCAGCTTCTAGGCAAAACATAA 579 0.4421 MVQNNGGNFRNTKPSKAHWKPSEDAKLKQLIADHGAKNWNNIAEQLQGRTGKSCRLRWLNHLDPSIKREPLSKEEEEMLLQLHTLHGTKWAHISKHFPGRRDNALKNHYHVIKARRQRERTKVLGKKRSNEDNGINGKCKTVEGMNVVHTRRNPWDSPPAPMGVTPPLGGHVTPEADEGGEWSGSWQLLGKT* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0781 192 Pfam Myb-like DNA-binding domain 19 79 - -
Mtr6g0781 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Mtr6g0781 192 PANTHER MYB PROTEIN-RELATED 4 129 - -
Mtr6g0781 192 MobiDBLite consensus disorder prediction 117 139 - -
Mtr6g0781 192 ProSiteProfiles Myb-like domain profile. 11 62 IPR001005 -
Mtr6g0781 192 SMART sant 67 115 IPR001005 -
Mtr6g0781 192 SMART sant 15 64 IPR001005 -
Mtr6g0781 192 CDD SANT 72 113 IPR001005 -
Mtr6g0781 192 MobiDBLite consensus disorder prediction 1 23 - -
Mtr6g0781 192 PANTHER OS08G0435700 PROTEIN 4 129 - -
Mtr6g0781 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 66 IPR017930 -
Mtr6g0781 192 MobiDBLite consensus disorder prediction 151 192 - -
Mtr6g0781 192 Gene3D - 16 67 - -
Mtr6g0781 192 SUPERFAMILY Homeodomain-like 16 109 IPR009057 -
Mtr6g0781 192 CDD SANT 19 62 IPR001005 -
Mtr6g0781 192 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mtr6g0781 192 Gene3D - 70 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0781 Mtr-Chr6 9856313 9860757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0781 1 119 MYB Transcription Factor Family AT4G33450 56.557 6.87e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr6g0781 Myb_DNA-bind_6 8.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0781 K09422 - dcr:108218084 173.711