Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0766 ATGGATCACTACAAAGTTCTAGGGTTAGAAAAAACAGCAACCAAAGAAGAAATCAAAGCTGCATTCAAGAAACTCGCGCTTCAATGTCATCCAGATAAGCATTCTCAGTCACCGAAATACGTTCAACACAACGCCAAACTTCGATTCAAACAGGTTTCTGAAGCATATGAAGTTCTTATGGATGATCGCAAACGTGCCAAATATAATTACCAGTCGCATGCTGGTGGTGGAGGCCTGTGTCGGTACCAGTGCACTGAGTATTATTCAAAGTATGGATATGGTAAAAGTGGGAGTGGTTATGGAGATAAAACTAGGTCTAGTGGGTTGAATGGTGGTGGTGGCGGCGGTGGAGGTGGTTTTGGGGATAAATTTGGAACTGCTATTCGGAATTTGACGACGAGGTCTTCTCTTCTTAATCTTGGATATGCAGCGTAA 435 0.4299 MDHYKVLGLEKTATKEEIKAAFKKLALQCHPDKHSQSPKYVQHNAKLRFKQVSEAYEVLMDDRKRAKYNYQSHAGGGGLCRYQCTEYYSKYGYGKSGSGYGDKTRSSGLNGGGGGGGGGFGDKFGTAIRNLTTRSSLLNLGYAA* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0766 144 SMART dnaj_3 1 64 IPR001623 -
Mtr6g0766 144 CDD DnaJ 2 61 IPR001623 -
Mtr6g0766 144 Gene3D DnaJ domain 1 80 IPR036869 -
Mtr6g0766 144 PANTHER CO-CHAPERONE PROTEIN DJLA 1 143 - -
Mtr6g0766 144 PANTHER CHAPERONE PROTEIN DNAJ 72 1 143 - -
Mtr6g0766 144 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Mtr6g0766 144 Pfam DnaJ domain 2 69 IPR001623 -
Mtr6g0766 144 PRINTS DnaJ domain signature 4 22 IPR001623 -
Mtr6g0766 144 PRINTS DnaJ domain signature 22 37 IPR001623 -
Mtr6g0766 144 PRINTS DnaJ domain signature 44 64 IPR001623 -
Mtr6g0766 144 SUPERFAMILY Chaperone J-domain 1 75 IPR036869 -
Mtr6g0766 144 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0766 Mtr-Chr6 9677279 9677713 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0766 3 69 C2H2 Transcription Factor Family AT1G74250 40.299 4.92e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0766 - - mtr:MTR_6g027110 264.618