Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0760 ATGATGGATCATTACAAGGTTCTAGGGTTAAACAAAACAGCGTCAAAAGAAGAAATCAAAATCGCATTCAAGAAACTCGCGTTTCAATTTCATCCAGATAAGCATTCTCAATCATCTAAATCCGTTAGAGAAAATGCAACAATTCGATTTAAGCAGGTTTCTGAAGCGTATGAGGTTCTCATGGATGATCGGAAAAGGGCTGAGTTTAATTACCGGTGGCGGGCAGGTGGTGGTGGAGGAAGTGGTGGTGCCGGTGGAAGTGCCGGTAACTATTATTATCAGTCTCAGTATAGTTATGGATATGGTAGAAGTGGAAGTGGAAGTGGAAGTGGGAGTGGTTATTATGGTAAAAGTGGGTCTGGTGGTAGTGGTGGTTTTGGGGATAAATTTGGAGTTTTTATTCGGATTTTGACGGCGAGGTCTTCGCTTCTTAATCTTGGATTCGCAGCAGCTATATTAGGTGCGATGGTTGTTGTTGATTCAAGTGGAGAATCTTTATGGAAGATGCAAAATTCTGGGAAATCTTTTGAAGAAGCCATAAACACCATTGAGAAAGCAAAAGTGTATAAAAAAGACAACACGAATGAACATCCTTGA 597 0.407 MMDHYKVLGLNKTASKEEIKIAFKKLAFQFHPDKHSQSSKSVRENATIRFKQVSEAYEVLMDDRKRAEFNYRWRAGGGGGSGGAGGSAGNYYYQSQYSYGYGRSGSGSGSGSGYYGKSGSGGSGGFGDKFGVFIRILTARSSLLNLGFAAAILGAMVVVDSSGESLWKMQNSGKSFEEAINTIEKAKVYKKDNTNEHP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0760 198 SUPERFAMILY Chaperone J-domain 1 105 IPR036869 -
Mtr6g0760 198 ProSiteProfiles dnaJ domain profile. 3 73 IPR001623 -
Mtr6g0760 198 PRINTS DnaJ domain signature 5 23 IPR001623 -
Mtr6g0760 198 PRINTS DnaJ domain signature 23 38 IPR001623 -
Mtr6g0760 198 PRINTS DnaJ domain signature 45 65 IPR001623 -
Mtr6g0760 198 PRINTS DnaJ domain signature 65 84 IPR001623 -
Mtr6g0760 198 PANTHER CO-CHAPERONE PROTEIN DJLA 2 180 - -
Mtr6g0760 198 PANTHER CHAPERONE PROTEIN DNAJ 72 2 180 - -
Mtr6g0760 198 CDD DnaJ 3 62 IPR001623 -
Mtr6g0760 198 Pfam DnaJ domain 3 70 IPR001623 -
Mtr6g0760 198 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Mtr6g0760 198 Gene3D DnaJ domain 2 134 IPR036869 -
Mtr6g0760 198 SMART dnaj_3 2 65 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0760 Mtr-Chr6 9608297 9612912 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0760 4 67 C2H2 Transcription Factor Family AT1G74250 42.188 3.62e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0760 - - lang:109336420 221.09